Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu011007.1 Olea europaea HOM05D006254 ORTHO05D007409 2.0e-280 968.4 462 100.0
MSTRG.23507 Avicennia marina HOM05D006254 ORTHO05D007409 4.3e-203 711.4 461 71.6
Dinv02479 Davidia involucrata HOM05D006254 ORTHO05D007409 5.9e-200 701.0 462 70.6
Potri.004G137900 Populus trichocarpa HOM05D006254 ORTHO05D007409 5.0e-191 671.4 463 66.5
GSVIVG01000233001 Vitis vinifera HOM05D003183 ORTHO05D007409 7.2e-190 667.5 462 67.7
QL10p038598 Quercus lobata HOM05D006254 ORTHO05D007409 1.5e-187 659.8 463 66.1
CiPaw.04G178100 Carya illinoinensis HOM05D006254 ORTHO05D007409 2.6e-187 659.1 462 64.9
HanXRQChr01g0017761 Helianthus annuus HOM05D006254 ORTHO05D007409 9.1e-185 650.6 460 66.5
Cc07_g20930 Coffea canephora HOM05D006254 ORTHO05D007409 2.0e-184 649.4 504 62.9
Migut.H00776 Erythranthe guttata HOM05D006254 ORTHO05D007409 7.7e-184 647.5 461 65.1
ECA248G3109 Erigeron canadensis HOM05D006254 ORTHO05D007409 1.9e-182 642.9 459 66.9
Sopen03g020950 Solanum pennellii HOM05D006254 ORTHO05D007409 4.7e-181 638.3 461 64.2
MD03G1072300 Malus domestica HOM05D006254 ORTHO05D007409 5.2e-180 634.8 461 63.1
Solyc03g078230.3 Solanum lycopersicum HOM05D006254 ORTHO05D007409 1.2e-179 633.6 461 64.0
Prupe.6G059200 Prunus persica HOM05D006254 ORTHO05D007409 2.0e-179 632.9 462 63.9
TAR628G1014 Trochodendron aralioides HOM05D006254 ORTHO05D007409 4.1e-177 625.2 462 62.8
Peaxi162Scf00030g00012 Petunia axillaris HOM05D006254 ORTHO05D007409 1.2e-176 623.6 442 66.5
THA.LOC104803663 Tarenaya hassleriana HOM05D006254 ORTHO05D007409 1.3e-175 620.2 458 62.4
Cfa002251 Carpinus fangiana HOM05D006254 ORTHO05D007409 2.9e-175 619.0 462 62.3
PGR119G0951 Punica granatum HOM05D006254 ORTHO05D007409 3.2e-174 615.5 459 60.8
Sc20g0000720 Simmondsia chinensis HOM05D006254 ORTHO05D007409 5.5e-174 614.8 470 61.5
Gohir.A05G375400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 7.2e-174 614.4 464 60.6
Gorai.012G045500 Gossypium raimondii HOM05D006254 ORTHO05D007409 2.1e-173 612.8 464 60.6
arahy.Tifrunner.gnm1.ann1.ZNEY68 Arachis hypogaea HOM05D006254 ORTHO05D007409 4.7e-173 611.7 462 61.5
Ca_17588_v3 Cicer arietinum L. HOM05D006254 ORTHO05D007409 6.1e-173 611.3 458 61.1
Lalb_Chr12g0202731 Lupinus albus HOM05D006254 ORTHO05D007409 1.0e-172 610.5 461 60.3
arahy.Tifrunner.gnm1.ann1.9169VS Arachis hypogaea HOM05D006254 ORTHO05D007409 1.4e-172 610.1 462 61.9
PSO017G1045 Papaver somniferum HOM05D006254 ORTHO05D007409 5.2e-172 608.2 464 61.6
Lsat_1_v5_gn_1_78401 Lactuca sativa HOM05D006254 ORTHO05D007409 2.0e-171 606.3 434 64.3
CANSAT54G2690 Cannabis sativa HOM05D006254 ORTHO05D007409 2.6e-171 605.9 465 59.8
EL10Ac4g08984 Beta vulgaris HOM05D006254 ORTHO05D007409 3.4e-171 605.5 494 57.7
Eucgr.I00013 Eucalyptus grandis HOM05D006254 ORTHO05D007409 1.3e-170 603.6 459 61.0
Carub.0001s3633 Capsella rubella HOM05D006254 ORTHO05D007409 4.9e-170 601.7 459 59.3
Lj4g0026953 Lotus japonicus HOM05D006254 ORTHO05D007409 6.3e-170 601.3 462 60.2
TWI31G0260 Tripterygium wilfordii HOM05D006254 ORTHO05D007409 8.3e-170 600.9 439 62.9
MELO3C033099.2 Cucumis melo HOM05D006254 ORTHO05D007409 1.1e-169 600.5 458 63.1
CsaV3_4G030320 Cucumis sativus L. HOM05D006254 ORTHO05D007409 1.1e-169 600.5 458 62.2
CARHR037200 Cardamine hirsuta HOM05D006254 ORTHO05D007409 4.1e-169 598.6 462 60.0
BcaB02g09340 Brassica carinata HOM05D006254 ORTHO05D007409 4.5e-168 595.1 462 60.0
TPR.G12754 Trifolium pratense HOM05D006254 ORTHO05D007409 1.0e-167 594.0 462 59.5
BcaB02g09339 Brassica carinata HOM05D006254 ORTHO05D007409 1.7e-167 593.2 462 59.7
Sp4g18960 Schrenkiella parvula HOM05D006254 ORTHO05D007409 2.3e-167 592.8 460 60.0
AT1G47570 Arabidopsis thaliana HOM05D006254 ORTHO05D007409 1.9e-166 589.7 459 58.8
Medtr8g095410 Medicago truncatula HOM05D006254 ORTHO05D007409 1.2e-165 587.0 468 59.2
VMungo0251G0787 Vigna mungo HOM05D006254 ORTHO05D007409 2.1e-165 586.3 476 57.8
SGA_v2.0_scaffold54G19570 Striga asiatica HOM05D006254 ORTHO05D007409 2.8e-165 585.9 514 57.8
BcaC02g11789 Brassica carinata HOM05D006254 ORTHO05D007409 1.8e-164 583.2 461 58.6
C04p11350 Brassica napus HOM05D006254 ORTHO05D007409 1.8e-164 583.2 461 58.6
DCAR_009615 Daucus carota HOM05D006254 ORTHO05D007409 5.2e-164 581.6 416 65.1
FvH4_3g38370 Fragaria vesca HOM05D006254 ORTHO05D007409 2.6e-163 579.3 477 57.4
BolC4t22773H Brassica oleracea HOM05D006254 ORTHO05D007409 1.7e-162 576.6 467 57.8
A05p09180 Brassica napus HOM05D006254 ORTHO05D007409 4.9e-162 575.1 483 56.3
FAN21G3787 Fragaria x ananassa HOM05D006254 ORTHO05D007409 4.9e-162 575.1 477 56.6
BolC4t22794H Brassica oleracea HOM05D006254 ORTHO05D007409 8.3e-162 574.3 487 56.5
Thhalv10016597m.g Eutrema salsugineum HOM05D006254 ORTHO05D007409 3.2e-161 572.4 440 59.3
BraA05t19873Z Brassica rapa HOM05D006254 ORTHO05D007409 7.0e-161 571.2 486 56.2
FAN25G1911 Fragaria x ananassa HOM05D006254 ORTHO05D007409 1.3e-159 567.0 477 56.2
Aqoxy5G02669 Aquilegia oxysepala HOM05D006254 ORTHO05D007409 2.5e-158 562.8 465 57.0
FAN11G0663 Fragaria x ananassa HOM05D006254 ORTHO05D007409 2.5e-158 562.8 467 57.2
Gohir.D04G040400 Gossypium hirsutum HOM05D006254 ORTHO05D007409 2.5e-158 562.8 464 56.7
CSS0012450 Camellia sinensis var. sinensis HOM05D006254 ORTHO05D007409 1.7e-154 550.1 347 71.5
RcHm_v2.0_Chr5g0068971 Rosa chinensis HOM05D006254 ORTHO05D007409 4.9e-154 548.5 476 55.0
Manes.12G085200 Manihot esculenta HOM05D006254 ORTHO05D007409 8.6e-151 537.7 349 68.5
Nitab4.5_0012738g0010 Nicotiana tabacum HOM05D006254 ORTHO05D007409 9.8e-147 524.2 579 48.2
Rhsim09G0131600 Rhododendron simsii HOM05D006254 ORTHO05D007409 2.3e-143 513.1 347 67.4
Phvul.002G279100 Phaseolus vulgaris HOM05D006254 ORTHO05D007409 8.6e-143 511.1 463 53.8
FAN16G1494 Fragaria x ananassa HOM05D006254 ORTHO05D007409 6.2e-141 505.0 446 54.3
AUR62036036 Chenopodium quinoa HOM05D006254 ORTHO05D007409 8.1e-141 504.6 540 46.9
Thecc.01G235200 Theobroma cacao HOM05D006254 ORTHO05D007409 2.3e-140 503.1 406 58.1
Psat7g040840 Pisum sativum HOM05D006254 ORTHO05D007409 1.2e-139 500.7 393 57.3
Ciclev10024761m.g Citrus clementina HOM05D003183 ORTHO05D003697 9.2e-137 491.1 374 63.4
Zm00001eb200940 Zea mays HOM05D006254 ORTHO05D007409 1.6e-136 490.3 474 50.6
Migut.H00777 Erythranthe guttata HOM05D006254 ORTHO05D007409 2.3e-135 486.5 390 59.7
Os11g0175500 Oryza sativa ssp. japonica HOM05D006254 ORTHO05D007409 8.6e-135 484.6 508 47.8
Ah.04g163200 Amaranthus hybridus HOM05D006254 ORTHO05D007409 1.6e-133 480.3 461 51.8
Sabra04G0089300 Salix brachista HOM05D006254 ORTHO05D007409 2.8e-133 479.6 557 46.3
AL1G53850 Arabidopsis lyrata HOM05D006254 ORTHO05D007409 8.1e-133 478.0 348 60.9
HanXRQChr01g0017751 Helianthus annuus HOM05D006254 ORTHO05D007409 3.1e-132 476.1 459 51.2
Glyma.05G198100 Glycine max HOM05D006254 ORTHO05D007409 6.9e-132 474.9 396 56.3
Atru.chr4.972 Acer truncatum HOM05D006254 ORTHO05D007409 2.8e-125 453.0 343 62.7
Sed0010974 Sechium edule HOM05D006254 ORTHO05D007409 6.9e-124 448.4 377 58.9
RcHm_v2.0_Chr2g0157071 Rosa chinensis HOM05D006254 ORTHO05D007409 4.9e-122 442.2 375 56.5
CDE06G2483 Ceratophyllum demersum HOM05D006254 ORTHO05D007409 1.9e-121 440.3 397 53.1
Nitab4.5_0000004g0230 Nicotiana tabacum HOM05D006254 ORTHO05D007409 3.8e-114 416.0 463 48.8
MD11G1077300 Malus domestica HOM05D006254 ORTHO05D007409 2.4e-113 413.3 376 52.9
HPP92_016136 Vanilla planifolia HOM05D006254 ORTHO05D007409 2.1e-104 383.6 456 46.5
MD11G1078600 Malus domestica HOM05D006254 ORTHO05D007409 8.7e-103 378.3 412 46.4
unitig_65.g29879 Utricularia gibba HOM05D006254 ORTHO05D007409 7.6e-99 365.2 458 44.5
vmacro10394 Vaccinium macrocarpon HOM05D006254 ORTHO05D007409 3.2e-97 359.8 303 57.8
AUR62004819 Chenopodium quinoa HOM05D006254 ORTHO05D007409 1.3e-93 347.8 421 44.9
Actinidia34771 Actinidia chinensis HOM05D000969 ORTHO05D000899 5.3e-92 342.4 222 70.7
unitig_62.g23450 Utricularia gibba HOM05D006254 ORTHO05D007409 7.7e-91 338.6 499 41.1
Aa31LG5G9250 Aethionema arabicum HOM05D006254 ORTHO05D007409 2.1e-88 330.5 259 56.4
Hma1.2p1_0057F.1_g032170 Hydrangea macrophylla HOM05D006254 ORTHO05D007409 2.7e-88 330.1 199 70.4
Haze_25433 Corylus avellana HOM05D006254 ORTHO05D007409 3.9e-79 299.7 237 61.2
Hund06901 Selenicereus undatus HOM05D006254 ORTHO05D007409 5.2e-79 299.3 263 52.9
MD00G1120300 Malus domestica HOM05D006254 ORTHO05D007409 1.5e-78 297.7 260 54.6
Migut.H00787 Erythranthe guttata HOM05D006254 ORTHO05D007409 4.8e-77 292.7 224 64.3
MD11G1077500 Malus domestica HOM05D006254 ORTHO05D007409 3.1e-76 290.0 287 50.2
Haze_25436 Corylus avellana HOM05D006254 ORTHO05D007409 2.5e-73 280.4 206 63.6
Cpa.g.sc138.23 Carica papaya HOM05D006254 ORTHO05D007409 7.5e-70 268.9 168 68.5
Lj4g0022315 Lotus japonicus HOM05D006254 ORTHO05D007409 8.8e-63 245.4 222 57.2
Mapoly0003s0196 Marchantia polymorpha HOM05D006254 ORTHO05D007409 2.7e-59 233.8 512 30.9
MD00G1120800 Malus domestica HOM05D006254 ORTHO05D007409 2.3e-58 230.7 159 63.5
MD11G1078400 Malus domestica HOM05D006254 ORTHO05D007409 1.9e-57 227.6 159 62.9
AagrBONN_evm.TU.Sc2ySwM_117.2849 Anthoceros agrestis HOM05D006254 ORTHO05D007409 3.1e-52 210.3 351 34.5
Haze_25432 Corylus avellana HOM05D006254 ORTHO05D007409 2.0e-38 164.5 251 37.8
ATR0584G026 Amborella trichopoda HOM05D006254 ORTHO05D007409 4.4e-38 163.3 201 44.8
SEGI_09568 Sequoiadendron giganteum HOM05D006254 ORTHO05D007409 5.8e-38 162.9 234 37.2
AagrBONN_evm.TU.Sc2ySwM_228.4097 Anthoceros agrestis HOM05D006254 ORTHO05D007409 7.5e-38 162.5 301 32.9
Haze_25431 Corylus avellana HOM05D006254 ORTHO05D007409 9.8e-38 162.2 251 37.5
CBR_g38543 Chara braunii HOM05D006254 ORTHO05D007409 3.0e-34 150.6 543 25.0
Duzib264G1273 Durio zibethinus HOM05D006254 ORTHO05D007409 6.2e-32 142.9 81 72.8
RcHm_v2.0_Chr2g0157061 Rosa chinensis HOM05D006254 ORTHO05D007409 4.0e-31 140.2 91 64.8
BolC4t22792H Brassica oleracea HOM05D006254 ORTHO05D007409 9.9e-30 135.6 135 51.9
GSVIVG01038034001 Vitis vinifera HOM05D001605 ORTHO05D007409 3.3e-25 120.6 70 70.0
Actinidia38917 Actinidia chinensis HOM05D006254 ORTHO05D007409 5.6e-25 119.8 115 54.8
Nn1g08418 Nelumbo nucifera HOM05D006254 ORTHO05D007409 4.7e-24 116.7 87 57.5
MD11G1077000 Malus domestica HOM05D006254 ORTHO05D007409 5.2e-23 113.2 104 52.9
MD11G1077800 Malus domestica HOM05D006254 ORTHO05D007409 5.2e-23 113.2 66 69.7
ClCG04G002460 Citrullus lanatus HOM05D006254 ORTHO05D007409 3.4e-22 110.5 98 58.2
HanXRQChr02g0035161 Helianthus annuus HOM05D006254 ORTHO05D007409 2.2e-21 107.8 108 52.8
AagrBONN_evm.TU.Sc2ySwM_228.4094 Anthoceros agrestis HOM05D006254 ORTHO05D007409 1.4e-20 105.1 268 28.0
Glyma.08G005450 Glycine max HOM05D006254 ORTHO05D007409 4.1e-20 103.6 82 58.5
PSO170G1462 Papaver somniferum HOM05D006254 ORTHO05D007409 1.6e-19 101.7 110 48.2
HanXRQChr13g0399511 Helianthus annuus HOM05D006254 ORTHO05D007409 1.4e-15 88.6 96 51.0
arahy.Tifrunner.gnm1.ann1.SX6F5A Arachis hypogaea HOM05D006254 ORTHO05D007409 1.9e-12 78.2 83 48.2
AagrBONN_evm.TU.Sc2ySwM_340.558 Anthoceros agrestis HOM05D002405 ORTHO05D002483 2.4e-12 77.8 124 33.9
Actinidia38918 Actinidia chinensis HOM05D006254 ORTHO05D007409 3.2e-12 77.4 42 73.8
AL1G53840 Arabidopsis lyrata HOM05D003114 ORTHO05D003519 1.4e-07 62.0 77 48.1
BolC4t22791H Brassica oleracea HOM05D006254 ORTHO05D007409 5.8e-06 56.6 54 42.6


User provided reference genes

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