Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 3.3e-161 571.6 282 100.0
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 1.8e-106 389.8 270 73.3
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 8.8e-98 360.9 269 65.4
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 2.0e-97 359.8 264 66.7
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 2.2e-96 356.3 264 65.9
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 1.1e-95 354.0 262 66.8
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 2.4e-95 352.8 263 66.5
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 5.3e-95 351.7 273 65.2
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 9.1e-95 350.9 268 64.6
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 1.2e-94 350.5 272 66.5
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 1.2e-94 350.5 272 66.5
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 1.2e-94 350.5 273 65.2
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 1.6e-94 350.1 263 66.2
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 2.0e-94 349.7 273 64.8
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 2.0e-94 349.7 273 64.1
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 7.7e-94 347.8 268 65.7
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 3.8e-93 345.5 224 74.1
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 5.0e-93 345.1 260 68.1
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 5.0e-93 345.1 260 68.1
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 5.0e-93 345.1 225 72.9
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 6.5e-93 344.7 260 65.4
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 8.5e-93 344.4 275 64.7
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 1.9e-92 343.2 260 65.4
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 1.9e-92 343.2 264 66.7
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 3.2e-92 342.4 260 67.3
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 7.2e-92 341.3 226 73.0
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.2e-91 340.5 254 67.7
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 2.1e-91 339.7 224 71.9
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.1e-91 339.7 219 74.9
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 4.7e-91 338.6 222 73.9
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 8.0e-91 337.8 263 63.9
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 3.0e-90 335.9 230 72.2
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 4.4e-89 332.0 267 62.5
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 4.4e-89 332.0 265 62.6
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 1.3e-88 330.5 225 70.7
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 6.3e-88 328.2 262 60.7
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 1.4e-87 327.0 265 62.6
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 2.4e-87 326.2 264 62.5
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 2.4e-87 326.2 278 59.7
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 7.0e-87 324.7 274 60.2
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 1.2e-86 323.9 271 61.6
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 2.7e-86 322.8 266 62.0
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 5.9e-86 321.6 219 69.9
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 5.9e-86 321.6 263 60.8
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 1.0e-85 320.9 228 68.4
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 1.1e-84 317.4 268 60.8
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 2.5e-84 316.2 219 69.4
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 3.2e-84 315.8 266 59.8
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 2.7e-83 312.8 263 58.6
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 2.7e-83 312.8 219 69.9
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 3.6e-83 312.4 264 59.5
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 3.6e-83 312.4 218 67.4
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 3.6e-83 312.4 263 59.7
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 4.7e-83 312.0 265 58.5
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 4.7e-83 312.0 268 59.3
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 1.0e-82 310.8 223 67.7
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 1.0e-82 310.8 272 59.6
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 1.4e-82 310.5 218 68.8
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 1.4e-82 310.5 219 68.5
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 1.8e-82 310.1 265 59.6
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 2.3e-82 309.7 267 58.8
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 3.0e-82 309.3 271 59.8
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 5.2e-82 308.5 224 67.0
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 6.8e-82 308.1 263 60.5
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 8.8e-82 307.8 267 57.3
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 1.5e-81 307.0 225 65.3
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 2.0e-81 306.6 229 65.9
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 4.4e-81 305.4 263 60.1
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 5.7e-81 305.1 229 65.1
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 7.5e-81 304.7 266 56.4
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 7.5e-81 304.7 270 58.9
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.3e-80 303.9 229 65.1
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 3.7e-80 302.4 270 58.1
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 4.9e-80 302.0 223 65.5
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 4.9e-80 302.0 266 57.9
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 1.1e-79 300.8 225 64.0
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 1.1e-79 300.8 225 64.0
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 2.4e-79 299.7 264 57.6
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 2.4e-79 299.7 244 63.1
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 5.4e-79 298.5 223 66.4
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 7.0e-79 298.1 229 64.2
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 9.1e-79 297.7 266 56.8
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 9.1e-79 297.7 266 56.8
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 9.1e-79 297.7 266 56.8
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.2e-78 297.4 226 65.0
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 3.5e-78 295.8 224 65.2
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 4.5e-78 295.4 227 63.9
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 7.7e-78 294.7 223 65.5
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 1.3e-77 293.9 213 66.7
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.7e-77 293.5 247 60.7
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 3.8e-77 292.4 268 53.7
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 2.5e-76 289.7 221 66.1
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 5.6e-76 288.5 218 64.2
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 7.2e-76 288.1 465 40.0
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 6.1e-75 285.0 216 63.4
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 1.8e-74 283.5 218 63.3
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 8.9e-74 281.2 218 63.3
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 8.9e-74 281.2 249 59.0
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 2.6e-73 279.6 224 60.7
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 1.7e-72 276.9 185 69.7
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 3.2e-71 272.7 318 47.5
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 8.6e-69 264.6 232 57.3
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 1.8e-66 256.9 208 56.2
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 2.6e-65 253.1 208 57.2
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 4.4e-65 252.3 203 63.1
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 2.0e-57 226.9 208 54.3
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 5.8e-49 198.7 211 47.4
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 9.2e-47 191.4 158 57.6
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 1.2e-46 191.0 217 45.6
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.6e-46 190.7 168 56.5
Rhsim07G0185100 Rhododendron simsii HOM05D006420 ORTHO05D008009 3.3e-44 183.0 120 75.0
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 9.9e-41 171.4 117 68.4
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.3e-37 160.2 99 74.7
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 5.1e-37 159.1 108 68.5
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 1.9e-36 157.1 112 66.1
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 9.6e-36 154.8 105 68.6
QL03p007970 Quercus lobata HOM05D006420 ORTHO05D008009 9.6e-36 154.8 116 68.1
QL03p007144 Quercus lobata HOM05D006420 ORTHO05D008009 8.1e-35 151.8 117 68.4
Sabra05G0034600 Salix brachista HOM05D006420 ORTHO05D008009 3.6e-27 126.3 136 48.5
Cre16.g667100 Chlamydomonas reinhardtii HOM05D006420 ORTHO05D008009 6.0e-22 109.0 229 29.7
SEGI_28170 Sequoiadendron giganteum HOM05D006420 ORTHO05D008009 6.2e-19 99.0 83 57.8
vmacro23282 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.5e-15 87.0 104 50.0
QL03p007137 Quercus lobata HOM05D006420 ORTHO05D008009 1.6e-11 74.3 77 49.4
QL03p007977 Quercus lobata HOM05D006420 ORTHO05D008009 1.6e-11 74.3 67 55.2
Thhalv10024156m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 4.1e-10 69.7 84 42.9
SalBow5G0658 Salvia bowleyana HOM05D041286 ORTHO05D008009 5.5e-07 59.3 47 61.7
GSVIVG01012047001 Vitis vinifera HOM05D002624 ORTHO05D002796 2.1e-06 57.4 87 34.5


User provided reference genes

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