Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 8.6e-70 266.9 140 100.0
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 4.0e-27 125.2 138 54.3
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 4.0e-27 125.2 139 53.2
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 6.9e-27 124.4 126 58.7
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 2.6e-26 122.5 135 49.6
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 3.4e-26 122.1 139 53.2
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 4.5e-26 121.7 138 52.9
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 4.5e-26 121.7 136 53.7
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 5.8e-26 121.3 138 50.7
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 9.9e-26 120.6 150 48.7
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 2.9e-25 119.0 139 48.9
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 4.9e-25 118.2 143 49.7
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 8.4e-25 117.5 158 46.2
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 1.9e-24 116.3 134 51.5
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 7.1e-24 114.4 136 51.5
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 7.1e-24 114.4 144 48.6
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 9.3e-24 114.0 124 54.8
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 1.6e-23 113.2 136 50.7
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 1.0e-22 110.5 92 59.8
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 5.1e-22 108.2 111 57.7
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 6.7e-22 107.8 135 49.6
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 6.7e-22 107.8 112 56.2
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 8.7e-22 107.5 123 52.8
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.1e-21 107.1 120 52.5
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.1e-21 107.1 159 45.3
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.5e-21 106.7 147 46.9
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 1.5e-21 106.7 91 67.0
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 1.5e-21 106.7 114 54.4
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 1.9e-21 106.3 135 48.9
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 2.5e-21 105.9 120 51.7
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 3.3e-21 105.5 150 46.0
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 3.3e-21 105.5 53 98.1
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 5.6e-21 104.8 137 48.9
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 7.4e-21 104.4 111 53.2
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 7.4e-21 104.4 144 43.1
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 9.6e-21 104.0 166 42.2
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 1.3e-20 103.6 128 49.2
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 1.3e-20 103.6 112 55.4
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.3e-20 103.6 112 55.4
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.3e-20 103.6 112 55.4
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.3e-20 103.6 112 55.4
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.3e-20 103.6 120 51.7
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.6e-20 103.2 120 50.8
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 1.6e-20 103.2 109 54.1
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 1.6e-20 103.2 140 47.9
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 2.1e-20 102.8 141 44.7
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 2.1e-20 102.8 127 48.8
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 4.8e-20 101.7 53 92.5
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 4.8e-20 101.7 53 92.5
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 4.8e-20 101.7 53 94.3
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 4.8e-20 101.7 161 42.9
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 6.2e-20 101.3 111 54.1
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 8.1e-20 100.9 111 51.4
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 1.1e-19 100.5 116 49.1
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 1.1e-19 100.5 53 92.5
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 1.1e-19 100.5 53 92.5
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.1e-19 100.5 62 80.6
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 1.1e-19 100.5 53 90.6
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 1.1e-19 100.5 54 88.9
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 1.4e-19 100.1 108 53.7
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 1.4e-19 100.1 53 88.7
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 1.4e-19 100.1 53 92.5
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 1.8e-19 99.8 160 42.5
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.8e-19 99.8 53 90.6
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 2.4e-19 99.4 53 90.6
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 2.4e-19 99.4 53 90.6
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 3.1e-19 99.0 53 88.7
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 3.1e-19 99.0 147 44.9
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 4.0e-19 98.6 53 88.7
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 4.0e-19 98.6 98 56.1
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 4.0e-19 98.6 53 92.5
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 4.0e-19 98.6 128 50.0
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 5.3e-19 98.2 53 90.6
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 5.3e-19 98.2 53 88.7
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 5.3e-19 98.2 155 46.5
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 6.9e-19 97.8 143 44.8
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 6.9e-19 97.8 155 46.5
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 6.9e-19 97.8 104 52.9
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 2.0e-18 96.3 52 88.5
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 3.4e-18 95.5 112 47.3
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 3.4e-18 95.5 53 83.0
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 4.5e-18 95.1 53 83.0
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 5.8e-18 94.7 100 54.0
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 7.6e-18 94.4 113 46.9
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 7.6e-18 94.4 53 83.0
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 7.6e-18 94.4 53 83.0
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 7.6e-18 94.4 53 84.9
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 1.3e-17 93.6 53 84.9
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 2.2e-17 92.8 53 79.2
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 2.2e-17 92.8 111 46.8
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 2.2e-17 92.8 53 79.2
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 4.9e-17 91.7 53 79.2
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 1.4e-16 90.1 52 76.9
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 1.9e-16 89.7 53 75.5
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 2.5e-16 89.4 53 71.7
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 5.5e-16 88.2 52 76.9
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 1.3e-14 83.6 52 75.0
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 1.8e-14 83.2 51 74.5
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 2.3e-14 82.8 51 72.5
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 2.3e-14 82.8 51 72.5
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 3.3e-13 79.0 146 41.1
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 5.7e-13 78.2 53 64.2
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 4.8e-12 75.1 50 66.0
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 2.2e-09 66.2 51 54.9


User provided reference genes

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