Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010893.1 Olea europaea HOM05D003969 ORTHO05D003125 3.5e-64 248.1 118 100.0
Migut.A00008 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.4e-25 117.9 102 61.8
Cc08_g00220 Coffea canephora HOM05D003969 ORTHO05D003125 1.3e-21 106.7 108 58.3
CSS0007982 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 4.8e-21 104.8 129 50.4
Dinv41425 Davidia involucrata HOM05D003969 ORTHO05D003125 1.1e-20 103.6 118 48.3
MSTRG.26029 Avicennia marina HOM05D003969 ORTHO05D003125 3.1e-20 102.1 125 51.2
TAR625G0404 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.0e-20 101.7 113 50.4
Hma1.2p1_0182F.1_g080470 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 6.9e-20 100.9 117 47.0
Hma1.2p1_2744F.1_g327795 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 6.9e-20 100.9 117 47.0
Hma1.2p1_0228F.1_g096590 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 1.5e-19 99.8 125 52.0
Rhsim02G0205800 Rhododendron simsii HOM05D003969 ORTHO05D003125 7.6e-19 97.4 124 50.8
Dinv11721 Davidia involucrata HOM05D003969 ORTHO05D003125 2.9e-18 95.5 93 59.1
TAR626G0029 Trochodendron aralioides HOM05D003969 ORTHO05D003125 2.9e-18 95.5 113 48.7
TAR636G2249 Trochodendron aralioides HOM05D003969 ORTHO05D003125 4.9e-18 94.7 113 48.7
PGSC0003DMG400029901 Solanum tuberosum HOM05D003969 ORTHO05D003125 6.4e-18 94.4 117 46.2
Sopen08g011970 Solanum pennellii HOM05D003969 ORTHO05D003125 7.1e-17 90.9 123 46.3
Peaxi162Scf00116g00085 Petunia axillaris HOM05D003969 ORTHO05D003125 2.7e-16 89.0 104 51.0
Rhsim03G0254600 Rhododendron simsii HOM05D000320 ORTHO05D000532 2.7e-16 89.0 118 44.9
CiPaw.07G226900 Carya illinoinensis HOM05D003969 ORTHO05D003125 4.6e-16 88.2 98 50.0
Dinv15887 Davidia involucrata HOM05D003969 ORTHO05D003125 4.6e-16 88.2 73 65.8
Hma1.2p1_1784F.1_g302146 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.6e-16 88.2 96 49.0
Hma1.2p1_1784F.1_g302150 Hydrangea macrophylla HOM05D003969 ORTHO05D003125 4.6e-16 88.2 96 49.0
Peaxi162Scf00315g00011 Petunia axillaris HOM05D003969 ORTHO05D003125 6.0e-16 87.8 107 44.9
Solyc08g041810.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 6.0e-16 87.8 98 52.0
TAR383G0074 Trochodendron aralioides HOM05D003969 ORTHO05D003125 7.9e-16 87.4 111 49.5
Nn2g12243 Nelumbo nucifera HOM05D003969 ORTHO05D003125 2.3e-15 85.9 118 44.1
Actinidia21911 Actinidia chinensis HOM05D003969 ORTHO05D003125 6.7e-15 84.3 126 41.3
MBI14_g03633_MAGBIO Magnolia biondii HOM05D003969 ORTHO05D003125 1.1e-14 83.6 124 41.1
Nn8g39714 Nelumbo nucifera HOM05D003969 ORTHO05D003125 1.1e-14 83.6 110 47.3
Nitab4.5_0010572g0020 Nicotiana tabacum HOM05D003969 ORTHO05D003125 1.5e-14 83.2 124 41.9
Cfa013102 Carpinus fangiana HOM05D003969 ORTHO05D003125 4.3e-14 81.6 106 46.2
HPP92_005341 Vanilla planifolia HOM05D003969 ORTHO05D003125 1.3e-13 80.1 92 46.7
Cpa.g.sc46.86 Carica papaya HOM05D003969 ORTHO05D003125 2.8e-13 79.0 144 37.5
HPP92_006060 Vanilla planifolia HOM05D003969 ORTHO05D003125 3.7e-13 78.6 87 51.7
Nitab4.5_0002992g0060 Nicotiana tabacum HOM05D003969 ORTHO05D003125 4.8e-13 78.2 104 45.2
Haze_21463 Corylus avellana HOM05D008824 ORTHO05D003125 8.1e-13 77.4 106 46.2
Oeu057292.1 Olea europaea HOM05D003969 ORTHO05D003125 8.1e-13 77.4 94 54.3
PGSC0003DMG400005307 Solanum tuberosum HOM05D003969 ORTHO05D003125 1.1e-12 77.0 113 38.1
Actinidia04245 Actinidia chinensis HOM05D003969 ORTHO05D003125 2.4e-12 75.9 116 40.5
HanXRQChr05g0141561 Helianthus annuus HOM05D003969 ORTHO05D003125 5.3e-12 74.7 128 39.8
PSO675G3576 Papaver somniferum HOM05D003969 ORTHO05D003125 9.0e-12 73.9 112 38.4
PSO732G0403 Papaver somniferum HOM05D003969 ORTHO05D003125 9.0e-12 73.9 112 38.4
QL02p020337 Quercus lobata HOM05D008824 ORTHO05D003125 4.5e-11 71.6 100 38.0
Solyc01g011390.2 Solanum lycopersicum HOM05D003969 ORTHO05D003125 5.8e-11 71.2 114 37.7
TWI34G1911 Tripterygium wilfordii HOM05D003969 ORTHO05D003125 5.8e-11 71.2 132 39.4
ECA236G4020 Erigeron canadensis HOM05D003969 ORTHO05D003125 7.6e-11 70.9 137 35.8
Lsat_1_v5_gn_8_63081 Lactuca sativa HOM05D003969 ORTHO05D003125 7.6e-11 70.9 112 41.1
Sopen01g007400 Solanum pennellii HOM05D003969 ORTHO05D003125 1.7e-10 69.7 114 36.8
Cpa.g.sc187.25 Carica papaya HOM05D008824 ORTHO05D003125 2.2e-10 69.3 59 57.6
Manes.16G125900 Manihot esculenta HOM05D008824 ORTHO05D003125 3.8e-10 68.6 93 48.4
Sc23g0006550 Simmondsia chinensis HOM05D003969 ORTHO05D003125 3.8e-10 68.6 119 38.7
Nitab4.5_0000069g0040 Nicotiana tabacum HOM05D003969 ORTHO05D003125 8.4e-10 67.4 105 45.7
Ah.10g035700 Amaranthus hybridus HOM05D003969 ORTHO05D003125 1.1e-09 67.0 113 37.2
Potri.006G259200 Populus trichocarpa HOM05D008824 ORTHO05D003125 1.4e-09 66.6 100 43.0
THA.LOC104815009 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 2.4e-09 65.9 95 44.2
Manes.03G012100 Manihot esculenta HOM05D003969 ORTHO05D003125 4.2e-09 65.1 99 42.4
PGR031G2169 Punica granatum HOM05D003969 ORTHO05D003125 7.1e-09 64.3 85 45.9
Potri.003G070750 Populus trichocarpa HOM05D008824 ORTHO05D003125 9.3e-09 63.9 92 44.6
ClCG05G016610 Citrullus lanatus HOM05D003969 ORTHO05D003125 2.1e-08 62.8 100 42.0
Solyc07g007150.1 Solanum lycopersicum HOM05D003969 ORTHO05D003125 2.1e-08 62.8 116 40.5
Sopen07g003200 Solanum pennellii HOM05D003969 ORTHO05D003125 2.1e-08 62.8 117 39.3
CiPaw.15G182600 Carya illinoinensis HOM05D003969 ORTHO05D003125 2.7e-08 62.4 81 40.7
CDE02G3523 Ceratophyllum demersum HOM05D000894 ORTHO05D001833 2.7e-08 62.4 97 39.2
Prupe.7G255000 Prunus persica HOM05D003969 ORTHO05D003125 2.7e-08 62.4 68 48.5
Ca_21615_v3 Cicer arietinum L. HOM05D003969 ORTHO05D003125 3.5e-08 62.0 80 43.8
FAN26G0199 Fragaria x ananassa HOM05D003969 ORTHO05D003125 3.5e-08 62.0 143 35.0
Peaxi162Scf00391g00017 Petunia axillaris HOM05D003969 ORTHO05D003125 3.5e-08 62.0 96 39.6
SGA_v2.0_scaffold500G52494 Striga asiatica HOM05D003969 ORTHO05D003125 3.5e-08 62.0 90 42.2
Aqoxy7G03536 Aquilegia oxysepala HOM05D003969 ORTHO05D003125 6.0e-08 61.2 93 41.9
CSS0019227 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 6.0e-08 61.2 98 40.8
CSS0049905 Camellia sinensis var. sinensis HOM05D003969 ORTHO05D003125 6.0e-08 61.2 98 40.8
CiPaw.15G182500 Carya illinoinensis HOM05D003969 ORTHO05D003125 6.0e-08 61.2 71 45.1
MELO3C030306.2 Cucumis melo HOM05D008824 ORTHO05D003125 6.0e-08 61.2 68 45.6
Lalb_Chr12g0198511 Lupinus albus HOM05D003969 ORTHO05D003125 1.0e-07 60.5 101 38.6
FAN19G0689 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.3e-07 60.1 120 37.5
FAN28G0460 Fragaria x ananassa HOM05D003969 ORTHO05D003125 1.3e-07 60.1 120 37.5
Medtr4g116500 Medicago truncatula HOM05D003969 ORTHO05D003125 1.3e-07 60.1 80 42.5
SalBow1G8303 Salvia bowleyana HOM05D003969 ORTHO05D003125 1.3e-07 60.1 108 38.9
ClCG02G017250 Citrullus lanatus HOM05D003969 ORTHO05D003125 1.8e-07 59.7 136 36.0
Manes.14G138428 Manihot esculenta HOM05D003969 ORTHO05D003125 1.8e-07 59.7 139 36.7
THA.LOC104814116 Tarenaya hassleriana HOM05D008824 ORTHO05D003125 1.8e-07 59.7 116 36.2
AUR62041449 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.3e-07 59.3 71 45.1
CsaV3_2G032290 Cucumis sativus L. HOM05D008824 ORTHO05D003125 2.3e-07 59.3 68 47.1
FvH4_2g28320 Fragaria vesca HOM05D019695 ORTHO05D022679 2.3e-07 59.3 93 41.9
FAN24G2106 Fragaria x ananassa HOM05D019695 ORTHO05D022679 2.3e-07 59.3 93 41.9
Psat4g033280 Pisum sativum HOM05D003969 ORTHO05D003125 2.3e-07 59.3 82 46.3
Ah.16g104800 Amaranthus hybridus HOM05D003969 ORTHO05D003125 3.0e-07 58.9 116 36.2
Lsat_1_v5_gn_5_39780 Lactuca sativa HOM05D003969 ORTHO05D003125 3.0e-07 58.9 138 35.5
Prupe.1G486000 Prunus persica HOM05D019695 ORTHO05D022679 3.0e-07 58.9 102 44.1
PGSC0003DMG400030696 Solanum tuberosum HOM05D003969 ORTHO05D003125 3.0e-07 58.9 123 39.0
SGA_v2.0_scaffold64G21997 Striga asiatica HOM05D003969 ORTHO05D003125 3.0e-07 58.9 105 41.0
MSTRG.10635 Avicennia marina HOM05D003969 ORTHO05D003125 5.1e-07 58.2 92 42.4
MSTRG.10639 Avicennia marina HOM05D003969 ORTHO05D003125 5.1e-07 58.2 92 42.4
CANSAT11G0887 Cannabis sativa HOM05D003969 ORTHO05D003125 5.1e-07 58.2 121 36.4
Cc06_g07430 Coffea canephora HOM05D003969 ORTHO05D003125 5.1e-07 58.2 108 39.8
FAN20G0523 Fragaria x ananassa HOM05D019695 ORTHO05D022679 5.1e-07 58.2 93 40.9
Sed0021780 Sechium edule HOM05D003969 ORTHO05D003125 5.1e-07 58.2 131 41.2
vmacro12402 Vaccinium macrocarpon HOM05D006851 ORTHO05D008844 5.1e-07 58.2 97 41.2
FAN23G1308 Fragaria x ananassa HOM05D003969 ORTHO05D003125 6.7e-07 57.8 120 36.7
EL10Ac8g18819 Beta vulgaris HOM05D003969 ORTHO05D003125 8.7e-07 57.4 141 32.6
CANSAT01G2013 Cannabis sativa HOM05D008824 ORTHO05D003125 8.7e-07 57.4 82 42.7
Sabra06G0202600 Salix brachista HOM05D008824 ORTHO05D003125 1.1e-06 57.0 73 46.6
CDE02G0310 Ceratophyllum demersum HOM05D003969 ORTHO05D003125 1.5e-06 56.6 75 40.0
AUR62031569 Chenopodium quinoa HOM05D003969 ORTHO05D003125 1.5e-06 56.6 113 34.5
MELO3C004442.2 Cucumis melo HOM05D003969 ORTHO05D003125 1.5e-06 56.6 97 43.3
Gohir.A13G203200 Gossypium hirsutum HOM05D003969 ORTHO05D003125 1.5e-06 56.6 91 38.5
Gorai.013G237600 Gossypium raimondii HOM05D003969 ORTHO05D003125 1.5e-06 56.6 91 38.5
ClCG08G013530 Citrullus lanatus HOM05D008824 ORTHO05D003125 1.9e-06 56.2 82 40.2
Sc23g0006560 Simmondsia chinensis HOM05D003969 ORTHO05D003125 1.9e-06 56.2 103 41.7
EL10Ac2g04157 Beta vulgaris HOM05D003969 ORTHO05D003125 2.5e-06 55.8 114 35.1
AUR62012444 Chenopodium quinoa HOM05D003969 ORTHO05D003125 2.5e-06 55.8 113 34.5
COL.COLO4_18912 Corchorus olitorius HOM05D003969 ORTHO05D003125 2.5e-06 55.8 91 41.8
CsaV3_4G036890 Cucumis sativus L. HOM05D003969 ORTHO05D003125 2.5e-06 55.8 89 39.3
BcaB04g18063 Brassica carinata HOM05D003969 ORTHO05D003125 3.3e-06 55.5 134 34.3
Lj4g0023658 Lotus japonicus HOM05D003969 ORTHO05D003125 3.3e-06 55.5 80 41.2
Sabra18G0025300 Salix brachista HOM05D008824 ORTHO05D003125 3.3e-06 55.5 61 54.1
FAN27G0582 Fragaria x ananassa HOM05D019695 ORTHO05D022679 4.3e-06 55.1 93 39.8
Gohir.D13G208500 Gossypium hirsutum HOM05D003969 ORTHO05D003125 4.3e-06 55.1 91 37.4
AUR62011257 Chenopodium quinoa HOM05D003969 ORTHO05D003125 5.6e-06 54.7 53 50.9
Duzib150G0809 Durio zibethinus HOM05D003969 ORTHO05D003125 5.6e-06 54.7 104 38.5
Migut.K00379 Erythranthe guttata HOM05D003969 ORTHO05D003125 5.6e-06 54.7 116 36.2
Eucgr.C01632 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.6e-06 54.7 97 37.1
Eucgr.C01699 Eucalyptus grandis HOM05D003969 ORTHO05D003125 5.6e-06 54.7 97 37.1
Phvul.003G174600 Phaseolus vulgaris HOM05D003969 ORTHO05D003125 5.6e-06 54.7 85 41.2
RcHm_v2.0_Chr2g0086701 Rosa chinensis HOM05D003969 ORTHO05D003125 5.6e-06 54.7 67 50.7
Gohir.A05G056900 Gossypium hirsutum HOM05D003969 ORTHO05D003125 7.4e-06 54.3 50 48.0
BraA10t44721Z Brassica rapa HOM05D008824 ORTHO05D003125 9.6e-06 53.9 111 34.2
Haze_19321 Corylus avellana HOM05D003969 ORTHO05D003125 9.6e-06 53.9 94 41.5
Eucgr.C01639 Eucalyptus grandis HOM05D003969 ORTHO05D003125 9.6e-06 53.9 99 36.4
Sopen12g005450 Solanum pennellii HOM05D003969 ORTHO05D003125 9.6e-06 53.9 121 31.4
TPR.G15776 Trifolium pratense HOM05D003969 ORTHO05D003125 9.6e-06 53.9 82 41.5


User provided reference genes

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