Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 8.3e-99 363.6 173 100.0
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 1.1e-87 326.6 168 90.5
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 8.1e-86 320.5 168 87.5
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.1e-85 320.1 168 87.5
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.4e-85 319.7 168 86.9
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 1.8e-85 319.3 168 87.5
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 3.1e-85 318.5 168 88.1
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 8.9e-85 317.0 168 87.5
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 1.2e-84 316.6 167 88.0
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 2.0e-84 315.8 168 87.5
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.4e-84 315.1 168 88.1
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 3.4e-84 315.1 168 87.5
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 5.8e-84 314.3 168 87.5
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 9.9e-84 313.5 168 86.9
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 2.2e-83 312.4 168 87.5
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 4.9e-83 311.2 168 86.3
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 6.4e-83 310.8 168 85.7
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 6.4e-83 310.8 168 86.9
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 8.4e-83 310.5 168 86.3
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.1e-82 310.1 168 85.7
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 1.1e-82 310.1 168 85.7
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 1.4e-82 309.7 168 86.9
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 1.9e-82 309.3 168 85.1
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 2.4e-82 308.9 168 86.9
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 4.2e-82 308.1 168 86.3
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 5.4e-82 307.8 168 83.9
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 1.6e-81 306.2 168 84.5
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 3.5e-81 305.1 168 84.5
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 4.6e-81 304.7 168 85.1
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 1.0e-80 303.5 171 80.7
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 1.0e-80 303.5 168 82.1
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.0e-80 302.0 168 82.1
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 3.9e-80 301.6 168 84.5
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 3.9e-80 301.6 168 83.9
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 5.1e-80 301.2 168 81.5
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 5.1e-80 301.2 168 83.9
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 5.1e-80 301.2 169 84.0
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 6.6e-80 300.8 168 83.3
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 1.9e-79 299.3 168 81.5
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 2.5e-79 298.9 169 82.2
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 3.3e-79 298.5 168 83.3
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 3.3e-79 298.5 168 82.7
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 7.3e-79 297.4 168 83.9
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 1.3e-78 296.6 168 82.1
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 1.3e-78 296.6 168 81.5
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 2.8e-78 295.4 168 81.0
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 2.8e-78 295.4 169 82.8
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 2.8e-78 295.4 168 83.3
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 3.6e-78 295.0 168 82.1
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 1.8e-77 292.7 168 81.5
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 1.8e-77 292.7 168 82.1
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 3.1e-77 292.0 170 81.2
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 4.0e-77 291.6 170 80.6
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 5.3e-77 291.2 168 79.8
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 5.3e-77 291.2 169 81.7
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 6.9e-77 290.8 168 79.8
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 9.0e-77 290.4 167 81.4
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 1.2e-76 290.0 168 80.4
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 1.2e-76 290.0 168 81.0
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 2.0e-76 289.3 168 79.2
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 5.8e-76 287.7 168 78.6
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 9.9e-76 287.0 168 79.2
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 9.9e-76 287.0 171 79.5
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 1.3e-75 286.6 200 71.5
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 1.1e-74 283.5 168 78.0
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 1.4e-74 283.1 168 77.4
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 1.9e-74 282.7 148 87.2
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 9.3e-74 280.4 168 77.4
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 9.3e-74 280.4 168 77.4
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 1.2e-73 280.0 168 79.2
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 2.1e-73 279.3 168 78.6
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 2.1e-73 279.3 168 76.8
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 2.7e-73 278.9 168 76.2
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 3.5e-73 278.5 199 67.3
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 6.0e-73 277.7 219 66.2
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 1.3e-72 276.6 168 76.2
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 5.1e-72 274.6 167 75.4
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 8.7e-72 273.9 205 66.8
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 8.7e-72 273.9 145 86.9
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 1.3e-70 270.0 149 83.9
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 1.6e-70 269.6 150 83.3
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 4.8e-70 268.1 198 67.2
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.1e-69 266.9 200 67.0
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 2.0e-68 262.7 146 81.5
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 3.8e-67 258.5 195 68.2
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 6.4e-67 257.7 216 60.2
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 1.3e-64 250.0 186 66.1
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 3.0e-64 248.8 168 68.5
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 5.6e-63 244.6 150 78.7
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 3.7e-62 241.9 185 67.0
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 4.8e-62 241.5 167 71.9
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 1.0e-59 233.8 169 65.1
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 2.9e-59 232.3 131 84.7
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 6.5e-59 231.1 173 63.6
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 5.5e-58 228.0 125 84.0
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 1.5e-55 219.9 115 93.0
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 4.3e-55 218.4 176 67.6
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 4.3e-55 218.4 176 67.6
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 7.4e-55 217.6 154 70.8
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 1.6e-54 216.5 168 65.5
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 6.2e-54 214.5 266 48.5
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 4.6e-49 198.4 173 56.1
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 1.9e-47 193.0 331 36.9
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 3.1e-45 185.7 98 88.8
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 3.2e-42 175.6 91 86.8
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 2.2e-38 162.9 113 67.3
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 2.0e-36 156.4 145 57.2
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 2.6e-36 156.0 106 67.9
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 1.8e-32 143.3 81 81.5
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 5.7e-23 111.7 96 60.4
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 4.7e-17 92.0 88 55.7
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 2.3e-16 89.7 101 49.5
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 2.5e-10 69.7 45 68.9
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 3.4e-07 59.3 29 89.7


User provided reference genes

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