Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010778.1 Olea europaea HOM05D001479 ORTHO05D001401 5.1e-38 160.6 82 100.0
Oeu037427.1 Olea europaea HOM05D001479 ORTHO05D001401 3.1e-27 124.8 79 81.0
MSTRG.28138 Avicennia marina HOM05D001479 ORTHO05D001401 1.9e-21 105.5 79 70.9
SalBow5G4613 Salvia bowleyana HOM05D001479 ORTHO05D001401 1.6e-20 102.4 79 72.2
MSTRG.4945 Avicennia marina HOM05D001479 ORTHO05D001401 4.8e-20 100.9 79 65.8
SGA_v2.0_scaffold77G25262 Striga asiatica HOM05D001479 ORTHO05D001401 4.0e-19 97.8 79 67.1
MSTRG.20669 Avicennia marina HOM05D001479 ORTHO05D001401 2.6e-18 95.1 79 67.1
SGA_v2.0_scaffold340G49339 Striga asiatica HOM05D001479 ORTHO05D001401 4.9e-17 90.9 75 65.3
Oeu024398.1 Olea europaea HOM05D001479 ORTHO05D001401 2.5e-16 88.6 79 64.6
Migut.B01502 Erythranthe guttata HOM05D001479 ORTHO05D001401 7.1e-16 87.0 79 63.3
Actinidia30944 Actinidia chinensis HOM05D001479 ORTHO05D001401 7.9e-15 83.6 85 62.4
PGSC0003DMG403001724 Solanum tuberosum HOM05D001479 ORTHO05D001401 1.0e-14 83.2 85 61.2
SGA_v2.0_scaffold52G19258 Striga asiatica HOM05D001479 ORTHO05D001401 2.3e-14 82.0 79 62.0
Sopen01g035580 Solanum pennellii HOM05D001479 ORTHO05D001401 1.1e-13 79.7 87 58.6
Peaxi162Scf00793g00362 Petunia axillaris HOM05D001479 ORTHO05D001401 1.5e-13 79.3 83 63.9
CiPaw.13G023100 Carya illinoinensis HOM05D001479 ORTHO05D001401 2.5e-13 78.6 87 58.6
SGA_v2.0_scaffold662G53406 Striga asiatica HOM05D001479 ORTHO05D001401 3.3e-13 78.2 79 55.7
Actinidia05781 Actinidia chinensis HOM05D001479 ORTHO05D001401 4.3e-13 77.8 85 60.0
Cfa011037 Carpinus fangiana HOM05D001479 ORTHO05D001401 4.3e-13 77.8 88 58.0
CiPaw.14G017900 Carya illinoinensis HOM05D001479 ORTHO05D001401 4.3e-13 77.8 87 57.5
Cc02_g25430 Coffea canephora HOM05D001479 ORTHO05D001401 4.3e-13 77.8 97 55.7
Haze_02888 Corylus avellana HOM05D001479 ORTHO05D001401 4.3e-13 77.8 88 58.0
Migut.N01722 Erythranthe guttata HOM05D001479 ORTHO05D001401 1.3e-12 76.3 79 59.5
Sabra14G0039100 Salix brachista HOM05D001479 ORTHO05D001401 3.7e-12 74.7 92 58.7
unitig_22.g5408 Utricularia gibba HOM05D001479 ORTHO05D001401 3.7e-12 74.7 79 55.7
Dinv44037 Davidia involucrata HOM05D001479 ORTHO05D001401 6.2e-12 73.9 90 60.0
CSS0015060 Camellia sinensis var. sinensis HOM05D001479 ORTHO05D001401 8.2e-12 73.6 87 59.8
Potri.014G052100 Populus trichocarpa HOM05D001479 ORTHO05D001401 8.2e-12 73.6 92 57.6
Sabra02G0109200 Salix brachista HOM05D001479 ORTHO05D001401 8.2e-12 73.6 96 57.3
Dinv43598 Davidia involucrata HOM05D001479 ORTHO05D001401 1.4e-11 72.8 91 59.3
Atru.chr5.86 Acer truncatum HOM05D001479 ORTHO05D001401 1.8e-11 72.4 87 58.6
MBI04_g46824_MAGBIO Magnolia biondii HOM05D001479 ORTHO05D001401 4.0e-11 71.2 84 61.9
Nitab4.5_0002341g0060 Nicotiana tabacum HOM05D001479 ORTHO05D001401 4.0e-11 71.2 85 57.6
Nitab4.5_0006622g0050 Nicotiana tabacum HOM05D001479 ORTHO05D001401 4.0e-11 71.2 85 56.5
Sabra14G0036900 Salix brachista HOM05D001479 ORTHO05D001401 4.0e-11 71.2 92 57.6
MBI04_g38568_MAGBIO Magnolia biondii HOM05D005140 ORTHO05D006288 5.3e-11 70.9 83 60.2
unitig_8.g3847 Utricularia gibba HOM05D001479 ORTHO05D001401 9.0e-11 70.1 90 52.2
CANSAT25G2604 Cannabis sativa HOM05D001479 ORTHO05D001401 1.2e-10 69.7 83 57.8
Nitab4.5_0000563g0140 Nicotiana tabacum HOM05D001479 ORTHO05D001401 1.2e-10 69.7 82 58.5
Potri.002G139900 Populus trichocarpa HOM05D001479 ORTHO05D001401 1.5e-10 69.3 94 55.3
THA.LOC104802504 Tarenaya hassleriana HOM05D001479 ORTHO05D001401 1.5e-10 69.3 86 52.3
Manes.05G057200 Manihot esculenta HOM05D001479 ORTHO05D001401 3.4e-10 68.2 83 56.6
unitig_0.g1336 Utricularia gibba HOM05D001479 ORTHO05D001401 3.4e-10 68.2 76 50.0
GSVIVG01018326001 Vitis vinifera HOM05D001479 ORTHO05D001401 3.4e-10 68.2 86 57.0
ClCG06G008090 Citrullus lanatus HOM05D001479 ORTHO05D001401 4.5e-10 67.8 89 56.2
MELO3C020365.2 Cucumis melo HOM05D001479 ORTHO05D001401 4.5e-10 67.8 90 55.6
Nitab4.5_0002598g0100 Nicotiana tabacum HOM05D001479 ORTHO05D001401 4.5e-10 67.8 87 54.0
CsaV3_2G011100 Cucumis sativus L. HOM05D001479 ORTHO05D001401 5.8e-10 67.4 92 54.3
Ciclev10021491m.g Citrus clementina HOM05D001479 ORTHO05D001401 7.6e-10 67.0 86 57.0
FvH4_7g09090 Fragaria vesca HOM05D001479 ORTHO05D001401 1.3e-09 66.2 82 58.5
Eucgr.E01661 Eucalyptus grandis HOM05D001479 ORTHO05D001401 1.7e-09 65.9 82 53.7
FAN06G1594 Fragaria x ananassa HOM05D001479 ORTHO05D001401 1.7e-09 65.9 82 54.9
COL.COLO4_12366 Corchorus olitorius HOM05D001479 ORTHO05D001401 2.2e-09 65.5 86 55.8
Duzib268G1211 Durio zibethinus HOM05D001479 ORTHO05D001401 2.2e-09 65.5 86 55.8
FAN03G0955 Fragaria x ananassa HOM05D001479 ORTHO05D001401 2.2e-09 65.5 83 57.8
Peaxi162Scf00423g00816 Petunia axillaris HOM05D001479 ORTHO05D001401 2.2e-09 65.5 80 56.2
Prupe.2G119400 Prunus persica HOM05D001479 ORTHO05D001401 2.2e-09 65.5 87 55.2
RcHm_v2.0_Chr1g0344941 Rosa chinensis HOM05D001479 ORTHO05D001401 2.9e-09 65.1 86 55.8
FAN10G2598 Fragaria x ananassa HOM05D001479 ORTHO05D001401 3.8e-09 64.7 82 58.5
Sed0014332 Sechium edule HOM05D001479 ORTHO05D001401 3.8e-09 64.7 83 54.2
Lj9A552T70 Lonicera japonica HOM05D001479 ORTHO05D001401 5.0e-09 64.3 94 50.0
Duzib133G0611 Durio zibethinus HOM05D001479 ORTHO05D001401 6.5e-09 63.9 85 58.8
MBI04_g20753_MAGBIO Magnolia biondii HOM05D001479 ORTHO05D001401 6.5e-09 63.9 75 58.7
AUR62018810 Chenopodium quinoa HOM05D001479 ORTHO05D001401 8.4e-09 63.5 87 49.4
Sed0015631 Sechium edule HOM05D001479 ORTHO05D001401 8.4e-09 63.5 89 51.7
TWI14G0419 Tripterygium wilfordii HOM05D001479 ORTHO05D001401 8.4e-09 63.5 90 57.8
Thecc.01G401000 Theobroma cacao HOM05D001479 ORTHO05D001401 1.1e-08 63.2 84 54.8
Nn6g33734 Nelumbo nucifera HOM05D001479 ORTHO05D001401 1.9e-08 62.4 83 56.6
Sopen10g026140 Solanum pennellii HOM05D001479 ORTHO05D001401 1.9e-08 62.4 87 49.4
PGSC0003DMG400007001 Solanum tuberosum HOM05D001479 ORTHO05D001401 2.5e-08 62.0 91 49.5
AUR62007193 Chenopodium quinoa HOM05D001479 ORTHO05D001401 3.2e-08 61.6 87 48.3
FAN10G3345 Fragaria x ananassa HOM05D001479 ORTHO05D001401 4.2e-08 61.2 82 56.1
CSS0032818 Camellia sinensis var. sinensis HOM05D001479 ORTHO05D001401 5.5e-08 60.8 81 46.9
CSS0033545 Camellia sinensis var. sinensis HOM05D001479 ORTHO05D001401 5.5e-08 60.8 86 45.3
Thhalv10001572m.g Eutrema salsugineum HOM05D001479 ORTHO05D001401 5.5e-08 60.8 88 47.7
Sp4g26760 Schrenkiella parvula HOM05D001479 ORTHO05D001401 5.5e-08 60.8 88 47.7
TAR374G0993 Trochodendron aralioides HOM05D001479 ORTHO05D001401 7.1e-08 60.5 83 54.2
Duzib138G1535 Durio zibethinus HOM05D001479 ORTHO05D001401 9.3e-08 60.1 86 53.5
FAN01G2224 Fragaria x ananassa HOM05D001479 ORTHO05D001401 9.3e-08 60.1 82 56.1
TAR375G0966 Trochodendron aralioides HOM05D001479 ORTHO05D001401 9.3e-08 60.1 85 54.1
THA.LOC104817184 Tarenaya hassleriana HOM05D001479 ORTHO05D001401 1.2e-07 59.7 89 49.4
TAR629G1876 Trochodendron aralioides HOM05D001479 ORTHO05D001401 1.2e-07 59.7 79 51.9
Aqoxy3G02603 Aquilegia oxysepala HOM05D001479 ORTHO05D001401 2.1e-07 58.9 58 63.8
Lj7A550G17 Lonicera japonica HOM05D001479 ORTHO05D001401 2.1e-07 58.9 93 48.4
QL04p026608 Quercus lobata HOM05D001479 ORTHO05D001401 2.1e-07 58.9 79 57.0
QL04p027009 Quercus lobata HOM05D001479 ORTHO05D001401 2.1e-07 58.9 79 57.0
Gohir.A11G074500 Gossypium hirsutum HOM05D001479 ORTHO05D001401 2.7e-07 58.5 86 50.0
Lsat_1_v5_gn_1_83801 Lactuca sativa HOM05D001479 ORTHO05D001401 2.7e-07 58.5 92 48.9
HPP92_001529 Vanilla planifolia HOM05D001479 ORTHO05D001401 2.7e-07 58.5 83 51.8
CAN.G756.32 Capsicum annuum HOM05D001479 ORTHO05D001401 3.5e-07 58.2 83 47.0
Gorai.007G084900 Gossypium raimondii HOM05D001479 ORTHO05D001401 3.5e-07 58.2 86 50.0
Hma1.2p1_1397F.1_g280680 Hydrangea macrophylla HOM05D001479 ORTHO05D001401 3.5e-07 58.2 83 53.0
Hma1.2p1_2356F.1_g320560 Hydrangea macrophylla HOM05D001479 ORTHO05D001401 3.5e-07 58.2 83 53.0
MD07G1094900 Malus domestica HOM05D001479 ORTHO05D001401 3.5e-07 58.2 89 49.4
CAN.G112.11 Capsicum annuum HOM05D001479 ORTHO05D001401 4.6e-07 57.8 54 64.8
TWI14G0015 Tripterygium wilfordii HOM05D001479 ORTHO05D001401 4.6e-07 57.8 90 52.2
Actinidia03413 Actinidia chinensis HOM05D001479 ORTHO05D001401 7.9e-07 57.0 72 52.8
Dinv25154 Davidia involucrata HOM05D001479 ORTHO05D001401 7.9e-07 57.0 81 49.4
Sc22g0001170 Simmondsia chinensis HOM05D001479 ORTHO05D001401 7.9e-07 57.0 86 45.3
HPP92_003333 Vanilla planifolia HOM05D001479 ORTHO05D001401 7.9e-07 57.0 85 49.4
PSO782G5036 Papaver somniferum HOM05D001479 ORTHO05D001401 1.0e-06 56.6 90 51.1
Hma1.2p1_0173F.1_g076380 Hydrangea macrophylla HOM05D001479 ORTHO05D001401 1.3e-06 56.2 82 53.7
TWI59G1263 Tripterygium wilfordii HOM05D001479 ORTHO05D001401 1.3e-06 56.2 90 52.2
Zm00001eb322050 Zea mays HOM05D001479 ORTHO05D001401 1.3e-06 56.2 83 54.2
EL10Ac5g12227 Beta vulgaris HOM05D001479 ORTHO05D001401 1.8e-06 55.8 86 46.5
PSO063G6667 Papaver somniferum HOM05D001479 ORTHO05D001401 1.8e-06 55.8 90 51.1
DCAR_025042 Daucus carota HOM05D001479 ORTHO05D001401 2.3e-06 55.5 85 52.9
PGR042G2253 Punica granatum HOM05D001479 ORTHO05D001401 2.3e-06 55.5 76 53.9
Aa31LG1G26240 Aethionema arabicum HOM05D001479 ORTHO05D001401 3.0e-06 55.1 75 56.0
ATR0665G614 Amborella trichopoda HOM05D001479 ORTHO05D001401 3.0e-06 55.1 98 45.9
CAN.G768.4 Capsicum annuum HOM05D001479 ORTHO05D001401 3.0e-06 55.1 81 49.4
Sc01g0007890 Simmondsia chinensis HOM05D001479 ORTHO05D001401 3.9e-06 54.7 85 44.7
Prupe.5G053000 Prunus persica HOM05D001479 ORTHO05D001401 5.1e-06 54.3 80 45.0
vmacro13525 Vaccinium macrocarpon HOM05D001479 ORTHO05D001401 5.1e-06 54.3 88 46.6
Solyc05g050680.4 Solanum lycopersicum HOM05D001479 ORTHO05D001401 6.7e-06 53.9 60 58.3
Solyc10g061930.1 Solanum lycopersicum HOM05D001479 ORTHO05D001401 6.7e-06 53.9 81 46.9
Sopen05g029090 Solanum pennellii HOM05D001479 ORTHO05D001401 6.7e-06 53.9 60 58.3
THA.LOC104806683 Tarenaya hassleriana HOM05D001479 ORTHO05D001401 8.7e-06 53.5 82 51.2


User provided reference genes

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