Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010754.1 Olea europaea HOM05D008222 ORTHO05D010364 1.1e-254 882.9 452 100.0
Oeu010756.1 Olea europaea HOM05D008222 ORTHO05D010364 2.5e-251 871.7 452 99.1
Oeu010753.1 Olea europaea HOM05D008222 ORTHO05D010364 2.2e-244 848.6 480 92.3
MSTRG.10386 Avicennia marina HOM05D008222 ORTHO05D010364 8.3e-90 335.1 487 46.6
Oeu060355.1 Olea europaea HOM05D008222 ORTHO05D010364 6.4e-82 308.9 493 44.4
Dinv31739 Davidia involucrata HOM05D008222 ORTHO05D010364 5.8e-67 259.2 534 38.0
Lj1C1035T2 Lonicera japonica HOM05D008222 ORTHO05D010364 2.1e-64 250.8 524 38.2
GSVIVG01033924001 Vitis vinifera HOM05D008222 ORTHO05D010364 2.4e-57 227.3 487 38.0
Oeu017707.1 Olea europaea HOM05D008222 ORTHO05D010364 7.1e-57 225.7 377 44.8
Cfa016663 Carpinus fangiana HOM05D008222 ORTHO05D010364 3.3e-54 216.9 534 34.6
Haze_19673 Corylus avellana HOM05D008222 ORTHO05D010364 2.9e-50 203.8 539 34.9
Manes.09G049300 Manihot esculenta HOM05D008222 ORTHO05D010364 2.1e-48 197.6 536 33.8
Atru.chr8.1411 Acer truncatum HOM05D008222 ORTHO05D010364 2.3e-47 194.1 578 32.0
Sabra06G0158800 Salix brachista HOM05D008222 ORTHO05D010364 1.9e-46 191.0 533 33.0
Potri.006G205800 Populus trichocarpa HOM05D008222 ORTHO05D010364 9.6e-46 188.7 524 29.6
Cpa.g.sc104.69 Carica papaya HOM05D008222 ORTHO05D010364 2.8e-45 187.2 534 31.5
CiPaw.09G018200 Carya illinoinensis HOM05D008222 ORTHO05D010364 3.6e-45 186.8 524 32.8
CiPaw.10G014900 Carya illinoinensis HOM05D008222 ORTHO05D010364 1.1e-44 185.3 529 31.0
QL07p037571 Quercus lobata HOM05D008222 ORTHO05D010364 1.4e-44 184.9 530 31.7
Thecc.05G099900 Theobroma cacao HOM05D008222 ORTHO05D010364 3.1e-44 183.7 510 32.9
Glyma.02G200000 Glycine max HOM05D008222 ORTHO05D010364 4.0e-44 183.3 525 30.5
Phvul.007G270200 Phaseolus vulgaris HOM05D008222 ORTHO05D010364 9.9e-43 178.7 486 31.9
Ciclev10011213m.g Citrus clementina HOM05D008222 ORTHO05D010364 1.3e-42 178.3 529 30.2
DCAR_020725 Daucus carota HOM05D008222 ORTHO05D010364 4.9e-42 176.4 527 32.6
VMungo0720G0042 Vigna mungo HOM05D008222 ORTHO05D010364 6.4e-42 176.0 498 31.7
TAR636G2750 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.3e-39 168.3 540 29.8
Nn6g34773 Nelumbo nucifera HOM05D008222 ORTHO05D010364 5.1e-39 166.4 538 28.8
CSS0016714 Camellia sinensis var. sinensis HOM05D008222 ORTHO05D010364 7.4e-38 162.5 552 30.3
TWI77G0950 Tripterygium wilfordii HOM05D008222 ORTHO05D010364 7.4e-38 162.5 532 28.9
MD12G1033800 Malus domestica HOM05D008222 ORTHO05D010364 4.8e-37 159.8 536 30.0
SGA_v2.0_scaffold184G40000 Striga asiatica HOM05D008222 ORTHO05D010364 4.8e-37 159.8 471 31.2
TAR633G2678 Trochodendron aralioides HOM05D008222 ORTHO05D010364 1.4e-36 158.3 547 31.3
RcHm_v2.0_Chr3g0475181 Rosa chinensis HOM05D008222 ORTHO05D010364 9.0e-36 155.6 455 31.2
Glyma.10G076700 Glycine max HOM05D008222 ORTHO05D010364 1.2e-35 155.2 525 28.8
COL.COLO4_29620 Corchorus olitorius HOM05D008222 ORTHO05D010364 4.9e-34 149.8 532 27.6
CANSAT64G2035 Cannabis sativa HOM05D008222 ORTHO05D010364 4.2e-33 146.7 549 29.1
TPR.G8743 Trifolium pratense HOM05D008222 ORTHO05D010364 7.1e-33 146.0 514 29.8
MBI17_g16777_MAGBIO Magnolia biondii HOM05D008222 ORTHO05D010364 9.3e-33 145.6 514 31.1
AUR62006264 Chenopodium quinoa HOM05D008222 ORTHO05D010364 4.6e-32 143.3 544 27.4
FAN05G0526 Fragaria x ananassa HOM05D008222 ORTHO05D010364 1.8e-31 141.4 476 29.0
FAN02G2041 Fragaria x ananassa HOM05D008222 ORTHO05D010364 8.7e-31 139.0 476 29.0
FAN14G0765 Fragaria x ananassa HOM05D008222 ORTHO05D010364 8.7e-31 139.0 472 29.4
Lj5g0010690 Lotus japonicus HOM05D008222 ORTHO05D010364 8.7e-31 139.0 522 29.1
FvH4_6g19810 Fragaria vesca HOM05D008222 ORTHO05D010364 1.9e-30 137.9 482 30.1
FAN05G0780 Fragaria x ananassa HOM05D008222 ORTHO05D010364 5.7e-30 136.3 475 28.4
FAN09G4126 Fragaria x ananassa HOM05D008222 ORTHO05D010364 9.0e-28 129.0 482 28.0
Hund03869 Selenicereus undatus HOM05D008222 ORTHO05D010364 2.0e-27 127.9 607 26.2
Aqoxy4G02694 Aquilegia oxysepala HOM05D008222 ORTHO05D010364 1.9e-25 121.3 91 60.4
EL10Ac7g16820 Beta vulgaris HOM05D008222 ORTHO05D010364 2.3e-23 114.4 187 36.4
Os02g0536400 Oryza sativa ssp. japonica HOM05D008222 ORTHO05D010364 1.5e-22 111.7 95 53.7
Medtr1g058110 Medicago truncatula HOM05D008222 ORTHO05D010364 5.9e-19 99.8 509 27.9
HPP92_009786 Vanilla planifolia HOM05D008222 ORTHO05D010364 1.0e-18 99.0 522 25.9
AUR62028514 Chenopodium quinoa HOM05D008222 ORTHO05D010364 8.5e-18 95.9 647 24.0
Sc20g0006580 Simmondsia chinensis HOM05D008222 ORTHO05D010364 8.5e-18 95.9 487 25.1
CDE06G1815 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 2.6e-11 74.3 450 24.7
SEGI_05246 Sequoiadendron giganteum HOM05D008222 ORTHO05D010364 4.5e-11 73.6 262 27.5
CDE08G0440 Ceratophyllum demersum HOM05D008222 ORTHO05D010364 7.2e-09 66.2 463 23.1
unitig_8.g3557 Utricularia gibba HOM05D008222 ORTHO05D010364 3.6e-08 63.9 54 46.3
AagrBONN_evm.TU.Sc2ySwM_368.1895 Anthoceros agrestis HOM05D008222 ORTHO05D010364 6.1e-08 63.2 52 51.9
ATR0772G019 Amborella trichopoda HOM05D008222 ORTHO05D010364 6.7e-07 59.7 545 22.8
Psat6g082000 Pisum sativum HOM05D008222 ORTHO05D010364 3.3e-06 57.4 42 59.5


User provided reference genes

Program Settings