Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010740.1 Olea europaea HOM05D006904 ORTHO05D008439 8.7e-126 453.8 245 100.0
CAN.G567.78 Capsicum annuum HOM05D006904 ORTHO05D008439 1.5e-90 336.7 246 72.0
Nitab4.5_0004251g0070 Nicotiana tabacum HOM05D006904 ORTHO05D008439 8.5e-89 330.9 241 71.4
Lj8A201G80 Lonicera japonica HOM05D006904 ORTHO05D008439 7.2e-88 327.8 248 71.4
PGSC0003DMG400012243 Solanum tuberosum HOM05D006904 ORTHO05D008439 7.2e-88 327.8 246 70.3
Sopen08g031220 Solanum pennellii HOM05D006904 ORTHO05D008439 9.4e-88 327.4 246 70.3
Solyc08g083010.3 Solanum lycopersicum HOM05D006904 ORTHO05D008439 6.1e-87 324.7 246 69.5
Potri.001G084500 Populus trichocarpa HOM05D006904 ORTHO05D008439 7.9e-87 324.3 246 70.3
Cfa011933 Carpinus fangiana HOM05D006904 ORTHO05D008439 5.1e-86 321.6 249 68.7
MSTRG.24864 Avicennia marina HOM05D006904 ORTHO05D008439 8.8e-86 320.9 247 72.5
COL.COLO4_10787 Corchorus olitorius HOM05D006904 ORTHO05D008439 2.0e-85 319.7 251 66.5
Haze_09157 Corylus avellana HOM05D006904 ORTHO05D008439 9.7e-85 317.4 250 67.6
Haze_09163 Corylus avellana HOM05D006904 ORTHO05D008439 9.7e-85 317.4 250 67.6
ECA233G3570 Erigeron canadensis HOM05D006904 ORTHO05D008439 1.8e-83 313.2 245 68.6
Ciclev10021179m.g Citrus clementina HOM05D006904 ORTHO05D008439 2.4e-83 312.8 249 66.3
Thecc.03G222200 Theobroma cacao HOM05D006904 ORTHO05D008439 6.9e-83 311.2 250 66.8
Hma1.2p1_0456F.1_g156570 Hydrangea macrophylla HOM05D006904 ORTHO05D008439 2.0e-82 309.7 241 72.2
RcHm_v2.0_Chr7g0186801 Rosa chinensis HOM05D006904 ORTHO05D008439 2.6e-82 309.3 247 66.4
QL02p029228 Quercus lobata HOM05D006904 ORTHO05D008439 1.7e-81 306.6 249 66.3
TAR629G0561 Trochodendron aralioides HOM05D006904 ORTHO05D008439 8.5e-81 304.3 250 65.2
HanXRQChr07g0192161 Helianthus annuus HOM05D006904 ORTHO05D008439 1.1e-80 303.9 243 66.7
Dinv02287 Davidia involucrata HOM05D006904 ORTHO05D008439 3.2e-80 302.4 251 68.1
CSS0028351 Camellia sinensis var. sinensis HOM05D006904 ORTHO05D008439 5.5e-80 301.6 243 66.3
Sabra01G0061300 Salix brachista HOM05D006904 ORTHO05D008439 5.5e-80 301.6 289 59.2
Gohir.D12G240700 Gossypium hirsutum HOM05D006904 ORTHO05D008439 7.2e-80 301.2 252 64.3
Gorai.008G257800 Gossypium raimondii HOM05D006904 ORTHO05D008439 7.2e-80 301.2 252 64.3
Nitab4.5_0007063g0060 Nicotiana tabacum HOM05D006904 ORTHO05D008439 7.2e-80 301.2 246 68.3
Atru.chr9.1900 Acer truncatum HOM05D006904 ORTHO05D008439 9.4e-80 300.8 242 68.6
MD06G1117600 Malus domestica HOM05D006904 ORTHO05D008439 9.4e-80 300.8 247 64.0
Migut.A01096 Erythranthe guttata HOM05D006904 ORTHO05D008439 1.2e-79 300.4 242 69.8
vmacro11509 Vaccinium macrocarpon HOM05D006904 ORTHO05D008439 1.2e-79 300.4 249 63.9
Rhsim02G0251400 Rhododendron simsii HOM05D006904 ORTHO05D008439 1.6e-79 300.1 248 64.5
Actinidia04169 Actinidia chinensis HOM05D006904 ORTHO05D008439 6.1e-79 298.1 248 64.9
Gohir.A12G239500 Gossypium hirsutum HOM05D006904 ORTHO05D008439 6.1e-79 298.1 252 63.9
MD14G1125000 Malus domestica HOM05D006904 ORTHO05D008439 6.7e-78 294.7 247 63.6
TWI81G0826 Tripterygium wilfordii HOM05D006904 ORTHO05D008439 8.8e-78 294.3 243 65.0
GSVIVG01019640001 Vitis vinifera HOM05D006904 ORTHO05D008439 1.5e-77 293.5 250 64.4
Aqoxy5G04256 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.3e-76 290.4 240 64.6
FAN04G1837 Fragaria x ananassa HOM05D006904 ORTHO05D008439 6.3e-76 288.1 250 62.0
Peaxi162Scf00074g00356 Petunia axillaris HOM05D006904 ORTHO05D008439 1.4e-75 287.0 225 67.1
PSO675G2501 Papaver somniferum HOM05D006904 ORTHO05D008439 4.1e-75 285.4 246 62.6
MBI04_g21743_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.6e-74 283.5 245 61.6
MBI04_g44912_MAGBIO Magnolia biondii HOM05D006904 ORTHO05D008439 1.6e-74 283.5 245 61.6
Cc08_g16680 Coffea canephora HOM05D006904 ORTHO05D008439 2.0e-74 283.1 248 62.5
EL10Ac5g12440 Beta vulgaris HOM05D006904 ORTHO05D008439 1.3e-73 280.4 239 61.5
FAN13G1638 Fragaria x ananassa HOM05D006904 ORTHO05D008439 1.7e-73 280.0 250 60.4
FvH4_5g11010 Fragaria vesca HOM05D006904 ORTHO05D008439 2.2e-73 279.6 250 60.8
FAN18G2239 Fragaria x ananassa HOM05D006904 ORTHO05D008439 2.9e-73 279.3 250 60.4
SGA_v2.0_scaffold104G30265 Striga asiatica HOM05D006904 ORTHO05D008439 3.8e-73 278.9 241 66.0
arahy.Tifrunner.gnm1.ann1.U3Q9D7 Arachis hypogaea HOM05D006904 ORTHO05D008439 5.0e-73 278.5 241 59.8
Lj2g0027548 Lotus japonicus HOM05D006904 ORTHO05D008439 5.0e-73 278.5 247 60.3
Duzib205G0314 Durio zibethinus HOM05D006904 ORTHO05D008439 6.5e-73 278.1 250 62.0
Glyma.09G286200 Glycine max HOM05D006904 ORTHO05D008439 6.5e-73 278.1 244 60.2
PSO541G0496 Papaver somniferum HOM05D006904 ORTHO05D008439 1.5e-72 276.9 248 60.9
Sc01g0010610 Simmondsia chinensis HOM05D006904 ORTHO05D008439 5.5e-72 275.0 244 62.3
Prupe.5G128700 Prunus persica HOM05D006904 ORTHO05D008439 7.2e-72 274.6 247 61.5
Thhalv10025762m.g Eutrema salsugineum HOM05D006904 ORTHO05D008439 1.6e-71 273.5 239 60.7
Lsat_1_v5_gn_6_9180 Lactuca sativa HOM05D000482 ORTHO05D000349 2.1e-71 273.1 227 63.9
Ah.12g053150 Amaranthus hybridus HOM05D006904 ORTHO05D008439 4.7e-71 271.9 237 62.0
AT4G24090 Arabidopsis thaliana HOM05D006904 ORTHO05D008439 6.1e-71 271.6 238 61.8
THA.LOC104813055 Tarenaya hassleriana HOM05D006904 ORTHO05D008439 8.0e-71 271.2 236 59.3
Carub.0007s1701 Capsella rubella HOM05D006904 ORTHO05D008439 1.8e-70 270.0 234 61.1
Medtr3g005290 Medicago truncatula HOM05D006904 ORTHO05D008439 1.8e-70 270.0 246 57.3
AL7G29200 Arabidopsis lyrata HOM05D006904 ORTHO05D008439 4.0e-70 268.9 238 59.7
A01p15360 Brassica napus HOM05D000458 ORTHO05D000951 4.0e-70 268.9 238 59.7
BraA01t01480Z Brassica rapa HOM05D006904 ORTHO05D008439 1.2e-69 267.3 238 59.2
BcaNung01113 Brassica carinata HOM05D006904 ORTHO05D008439 1.5e-69 266.9 238 59.2
BcaC09g50912 Brassica carinata HOM05D006904 ORTHO05D008439 2.0e-69 266.5 238 59.7
C01p19310 Brassica napus HOM05D000458 ORTHO05D000951 2.0e-69 266.5 238 59.7
BolC1t01857H Brassica oleracea HOM05D000458 ORTHO05D000951 2.0e-69 266.5 238 59.7
Ca_13963_v3 Cicer arietinum L. HOM05D006904 ORTHO05D008439 2.0e-69 266.5 240 59.6
arahy.Tifrunner.gnm1.ann1.NJ37M5 Arachis hypogaea HOM05D006904 ORTHO05D008439 2.6e-69 266.2 257 56.0
ClCG10G000840 Citrullus lanatus HOM05D006904 ORTHO05D008439 2.2e-68 263.1 245 58.8
Hund11354 Selenicereus undatus HOM05D006904 ORTHO05D008439 2.8e-68 262.7 239 60.7
Aa31LG6G7300 Aethionema arabicum HOM05D006904 ORTHO05D008439 4.8e-68 261.9 236 58.1
DCAR_006536 Daucus carota HOM05D006904 ORTHO05D008439 1.8e-67 260.0 240 58.8
Eucgr.E01035 Eucalyptus grandis HOM05D006904 ORTHO05D008439 1.8e-67 260.0 245 55.9
Psat1g000400 Pisum sativum HOM05D006904 ORTHO05D008439 3.1e-67 259.2 241 56.0
Phvul.002G333700 Phaseolus vulgaris HOM05D006904 ORTHO05D008439 9.1e-67 257.7 244 57.8
CiPaw.12G078200 Carya illinoinensis HOM05D006904 ORTHO05D008439 1.2e-66 257.3 250 58.8
AUR62007044 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.0e-66 256.5 242 57.0
VMungo1309G0432 Vigna mungo HOM05D006904 ORTHO05D008439 2.7e-66 256.1 244 57.4
TPR.G25509 Trifolium pratense HOM05D006904 ORTHO05D008439 5.0e-65 251.9 240 55.4
Sp7g22050 Schrenkiella parvula HOM05D006904 ORTHO05D008439 3.6e-63 245.7 238 56.3
CDE09G0165 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 4.7e-63 245.4 243 55.1
CDE11G0025 Ceratophyllum demersum HOM05D006904 ORTHO05D008439 7.5e-61 238.0 242 55.0
CANSAT21G0222 Cannabis sativa HOM05D006904 ORTHO05D008439 1.3e-60 237.3 244 54.9
ATR0620G017 Amborella trichopoda HOM05D006904 ORTHO05D008439 2.8e-60 236.1 245 52.2
Haze_16434 Corylus avellana HOM05D006904 ORTHO05D008439 1.0e-57 227.6 187 65.8
CsaV3_3G000910 Cucumis sativus L. HOM05D006904 ORTHO05D008439 5.5e-56 221.9 245 53.1
MELO3C013778.2 Cucumis melo HOM05D006904 ORTHO05D008439 1.2e-55 220.7 245 52.7
SalBow8G2695 Salvia bowleyana HOM05D006904 ORTHO05D008439 1.6e-55 220.3 241 55.6
Sed0025618 Sechium edule HOM05D006904 ORTHO05D008439 3.6e-55 219.2 209 59.8
PGR042G3610 Punica granatum HOM05D006904 ORTHO05D008439 1.3e-52 210.7 241 51.0
unitig_88.g27646 Utricularia gibba HOM05D006904 ORTHO05D008439 1.8e-51 206.8 231 50.2
Haze_14079 Corylus avellana HOM05D006904 ORTHO05D008439 2.7e-50 203.0 218 54.6
HPP92_025869 Vanilla planifolia HOM05D006904 ORTHO05D008439 1.1e-48 197.6 239 50.6
CARHR231490 Cardamine hirsuta HOM05D006904 ORTHO05D008439 7.3e-48 194.9 179 55.3
AUR62019908 Chenopodium quinoa HOM05D006904 ORTHO05D008439 1.6e-47 193.7 239 46.4
ECA246G4131 Erigeron canadensis HOM05D006904 ORTHO05D008439 8.9e-46 188.0 238 50.4
Manes.02G003600 Manihot esculenta HOM05D006904 ORTHO05D008439 1.2e-45 187.6 182 59.3
Os09g0529350 Oryza sativa ssp. japonica HOM05D006904 ORTHO05D008439 1.7e-41 173.7 190 50.0
Lsat_1_v5_gn_3_13720 Lactuca sativa HOM05D006904 ORTHO05D008439 9.5e-40 167.9 190 52.1
Zm00001eb319140 Zea mays HOM05D006904 ORTHO05D008439 5.2e-38 162.2 237 43.5
HanXRQChr06g0166841 Helianthus annuus HOM05D006904 ORTHO05D008439 1.9e-35 153.7 203 46.8
SEGI_29366 Sequoiadendron giganteum HOM05D006904 ORTHO05D008439 2.4e-35 153.3 218 40.8
Cpa.g.sc175.18 Carica papaya HOM05D006904 ORTHO05D008439 3.5e-34 149.4 136 61.8
Aqoxy5G04252 Aquilegia oxysepala HOM05D006904 ORTHO05D008439 1.1e-30 137.9 129 62.0
Pp3c9_20020 Physcomitrium patens HOM05D006904 ORTHO05D008439 1.7e-28 130.6 250 36.8
Nn5g30646 Nelumbo nucifera HOM05D006904 ORTHO05D008439 5.4e-27 125.6 116 58.6
Mapoly0033s0090 Marchantia polymorpha HOM05D006904 ORTHO05D008439 7.6e-21 105.1 230 37.4
QL02p029244 Quercus lobata HOM05D006904 ORTHO05D008439 2.9e-20 103.2 141 46.1
AagrBONN_evm.TU.Sc2ySwM_228.3172 Anthoceros agrestis HOM05D006904 ORTHO05D008439 1.2e-18 97.8 282 30.5
SMO361G0353 Selaginella moellendorffii HOM05D006904 ORTHO05D008439 1.6e-18 97.4 133 40.6
CBR_g70738 Chara braunii HOM05D006904 ORTHO05D008439 5.6e-16 89.0 238 30.3
MCO05G331 Micromonas commoda HOM05D006904 ORTHO05D008439 7.3e-16 88.6 242 32.6
BcaC09g50913 Brassica carinata HOM05D006904 ORTHO05D008439 3.4e-13 79.7 65 61.5
AUR62041665 Chenopodium quinoa HOM05D006904 ORTHO05D008439 2.4e-11 73.6 66 50.0
Cre02.g144850 Chlamydomonas reinhardtii HOM05D006904 ORTHO05D008439 4.6e-10 69.3 238 30.3
Aa31LG6G7320 Aethionema arabicum HOM05D003846 ORTHO05D004726 5.3e-06 55.8 115 38.3
QL11p014218 Quercus lobata HOM05D042224 ORTHO05D008439 9.0e-06 55.1 36 72.2


User provided reference genes

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