Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010732.1 Olea europaea HOM05D005744 ORTHO05D007503 1.6e-252 875.5 429 100.0
MSTRG.13706 Avicennia marina HOM05D005744 ORTHO05D007503 1.0e-190 670.2 429 76.5
Migut.E00304 Erythranthe guttata HOM05D005744 ORTHO05D007503 9.7e-189 663.7 429 75.3
CSS0041302 Camellia sinensis var. sinensis HOM05D005744 ORTHO05D007503 2.8e-188 662.1 429 74.4
Cc08_g16880 Coffea canephora HOM05D005744 ORTHO05D007503 4.6e-183 644.8 429 73.0
GSVIVG01008538001 Vitis vinifera HOM05D005744 ORTHO05D007503 1.4e-182 643.3 430 73.3
HanXRQChr16g0498211 Helianthus annuus HOM05D005744 ORTHO05D007503 5.7e-181 637.9 429 72.0
Manes.14G051500 Manihot esculenta HOM05D005744 ORTHO05D007503 6.3e-180 634.4 432 72.9
Nitab4.5_0002720g0090 Nicotiana tabacum HOM05D005744 ORTHO05D007503 2.4e-179 632.5 457 69.1
Peaxi162Scf00074g00136 Petunia axillaris HOM05D005744 ORTHO05D007503 4.1e-179 631.7 429 72.5
Potri.015G095400 Populus trichocarpa HOM05D005744 ORTHO05D007503 6.9e-179 630.9 425 73.4
Thecc.03G128600 Theobroma cacao HOM05D005744 ORTHO05D007503 2.0e-178 629.4 429 72.5
Atru.chr9.1122 Acer truncatum HOM05D005744 ORTHO05D007503 2.9e-177 625.5 429 73.0
Gorai.008G206000 Gossypium raimondii HOM05D005744 ORTHO05D007503 2.9e-177 625.5 429 72.0
COL.COLO4_28103 Corchorus olitorius HOM05D005744 ORTHO05D007503 5.0e-177 624.8 429 71.3
Gohir.D12G191700 Gossypium hirsutum HOM05D005744 ORTHO05D007503 1.9e-176 622.9 429 71.6
PGSC0003DMG400012114 Solanum tuberosum HOM05D005744 ORTHO05D007503 3.2e-176 622.1 429 71.3
CiPaw.11G008100 Carya illinoinensis HOM05D005744 ORTHO05D007503 4.2e-176 621.7 430 71.4
Nn3g16475 Nelumbo nucifera HOM05D005744 ORTHO05D007503 4.2e-176 621.7 426 70.7
Lsat_1_v5_gn_4_80081 Lactuca sativa HOM05D005744 ORTHO05D007503 5.5e-176 621.3 429 70.4
Gohir.A12G189400 Gossypium hirsutum HOM05D005744 ORTHO05D007503 9.4e-176 620.5 429 71.3
Sopen08g031450 Solanum pennellii HOM05D005744 ORTHO05D007503 1.2e-175 620.2 432 70.8
Cfa018827 Carpinus fangiana HOM05D005744 ORTHO05D007503 2.1e-175 619.4 430 71.9
Ciclev10020324m.g Citrus clementina HOM05D005744 ORTHO05D007503 2.1e-175 619.4 431 71.0
ECA232G3603 Erigeron canadensis HOM05D005744 ORTHO05D007503 2.1e-175 619.4 428 69.4
Sabra15G0116400 Salix brachista HOM05D005744 ORTHO05D007503 2.7e-175 619.0 425 71.5
Solyc08g083260.3 Solanum lycopersicum HOM05D005744 ORTHO05D007503 2.7e-175 619.0 432 70.4
RhsimUnG0231400 Rhododendron simsii HOM05D005744 ORTHO05D007503 1.8e-174 616.3 426 71.8
Rhsim08G0189700 Rhododendron simsii HOM05D005744 ORTHO05D007503 2.3e-174 615.9 426 72.1
QL10p003203 Quercus lobata HOM05D005744 ORTHO05D007503 8.8e-174 614.0 430 70.9
SalBow5G0293 Salvia bowleyana HOM05D005744 ORTHO05D007503 9.7e-173 610.5 442 69.7
DCAR_021616 Daucus carota HOM05D005744 ORTHO05D007503 2.2e-172 609.4 434 68.9
ClCG06G017860 Citrullus lanatus HOM05D005744 ORTHO05D007503 2.8e-172 609.0 436 69.5
Sed0005313 Sechium edule HOM05D005744 ORTHO05D007503 2.8e-172 609.0 432 69.0
Prupe.5G151700 Prunus persica HOM05D005744 ORTHO05D007503 1.2e-170 603.6 429 69.9
arahy.Tifrunner.gnm1.ann1.SJIN4P Arachis hypogaea HOM05D005744 ORTHO05D007503 2.0e-170 602.8 430 69.8
arahy.Tifrunner.gnm1.ann1.DQ5P63 Arachis hypogaea HOM05D005744 ORTHO05D007503 7.7e-170 600.9 429 69.0
MELO3C026209.2 Cucumis melo HOM05D005744 ORTHO05D007503 1.1e-168 597.0 436 67.7
CsaV3_1G000590 Cucumis sativus L. HOM05D005744 ORTHO05D007503 1.9e-168 596.3 431 67.5
Psat5g140680 Pisum sativum HOM05D005744 ORTHO05D007503 2.5e-168 595.9 429 68.3
CANSAT80G0573 Cannabis sativa HOM05D005744 ORTHO05D007503 4.7e-167 591.7 429 68.5
Ca_24503_v3 Cicer arietinum L. HOM05D005744 ORTHO05D007503 1.0e-166 590.5 430 68.4
Actinidia25578 Actinidia chinensis HOM05D005744 ORTHO05D007503 3.9e-166 588.6 390 74.1
THA.LOC104825016 Tarenaya hassleriana HOM05D005744 ORTHO05D007503 3.9e-166 588.6 425 68.0
Lj1g0015277 Lotus japonicus HOM05D005744 ORTHO05D007503 1.1e-165 587.0 429 67.8
PGR044G2189 Punica granatum HOM05D005744 ORTHO05D007503 1.5e-165 586.6 395 73.4
Lalb_Chr08g0237111 Lupinus albus HOM05D005744 ORTHO05D007503 2.6e-165 585.9 430 67.0
EL10As4g23384 Beta vulgaris HOM05D005744 ORTHO05D007503 3.7e-164 582.0 429 66.9
MD14G1157700 Malus domestica HOM05D005744 ORTHO05D007503 3.7e-164 582.0 432 66.2
Dinv11169 Davidia involucrata HOM05D005744 ORTHO05D007503 4.8e-164 581.6 430 68.1
Aqoxy3G01542 Aquilegia oxysepala HOM05D005744 ORTHO05D007503 2.4e-163 579.3 429 64.8
Medtr3g074980 Medicago truncatula HOM05D005744 ORTHO05D007503 3.1e-163 578.9 430 67.4
Carub.0007s1619 Capsella rubella HOM05D005744 ORTHO05D007503 7.0e-163 577.8 429 64.8
CARHR232280 Cardamine hirsuta HOM05D005744 ORTHO05D007503 7.0e-163 577.8 417 65.9
BraA03t14628Z Brassica rapa HOM05D005744 ORTHO05D007503 9.1e-163 577.4 427 66.0
Haze_07221 Corylus avellana HOM05D005744 ORTHO05D007503 9.1e-163 577.4 487 62.4
PSO782G2798 Papaver somniferum HOM05D005744 ORTHO05D007503 1.6e-162 576.6 430 65.1
BcaC06g32852 Brassica carinata HOM05D005744 ORTHO05D007503 1.0e-161 573.9 427 64.9
vmacro19203 Vaccinium macrocarpon HOM05D005744 ORTHO05D007503 3.8e-161 572.0 481 61.3
AL7G28320 Arabidopsis lyrata HOM05D005744 ORTHO05D007503 6.5e-161 571.2 429 64.8
TPR.G26152 Trifolium pratense HOM05D005744 ORTHO05D007503 6.5e-161 571.2 430 66.7
BolC7t45875H Brassica oleracea HOM05D005744 ORTHO05D007503 8.5e-161 570.9 427 64.6
A03p55610 Brassica napus HOM05D005744 ORTHO05D007503 1.1e-160 570.5 427 64.9
Sp7g22860 Schrenkiella parvula HOM05D005744 ORTHO05D007503 1.1e-160 570.5 427 63.7
C07p53850 Brassica napus HOM05D005744 ORTHO05D007503 2.5e-160 569.3 427 64.6
CAN.G567.98 Capsicum annuum HOM05D005744 ORTHO05D007503 9.4e-160 567.4 449 65.0
Thhalv10025348m.g Eutrema salsugineum HOM05D005744 ORTHO05D007503 9.4e-160 567.4 412 65.8
PSO801G0019 Papaver somniferum HOM05D005744 ORTHO05D007503 3.6e-159 565.5 423 65.0
Glyma.06G170500 Glycine max HOM05D005744 ORTHO05D007503 4.7e-159 565.1 429 66.4
Ah.02g114920 Amaranthus hybridus HOM05D005744 ORTHO05D007503 1.4e-158 563.5 457 63.0
VMungo1309G1043 Vigna mungo HOM05D005744 ORTHO05D007503 1.8e-158 563.1 430 65.3
Lj9A478G92 Lonicera japonica HOM05D005744 ORTHO05D007503 5.2e-158 561.6 399 68.4
TPR.G12158 Trifolium pratense HOM05D005744 ORTHO05D007503 5.2e-158 561.6 431 66.6
HPP92_020223 Vanilla planifolia HOM05D005744 ORTHO05D007503 5.2e-158 561.6 436 63.3
PSO339G3552 Papaver somniferum HOM05D005744 ORTHO05D007503 1.5e-157 560.1 423 64.1
Phvul.009G166600 Phaseolus vulgaris HOM05D005744 ORTHO05D007503 5.7e-157 558.1 435 64.6
Actinidia33099 Actinidia chinensis HOM05D005744 ORTHO05D007503 2.2e-156 556.2 409 67.7
AUR62025939 Chenopodium quinoa HOM05D005744 ORTHO05D007503 3.7e-156 555.4 393 69.0
Duzib205G1133 Durio zibethinus HOM05D005744 ORTHO05D007503 1.1e-155 553.9 426 66.7
AUR62029618 Chenopodium quinoa HOM05D005744 ORTHO05D007503 4.1e-155 552.0 395 67.8
CDE05G2332 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 7.0e-155 551.2 426 64.6
Eucgr.K02730 Eucalyptus grandis HOM05D005744 ORTHO05D007503 4.5e-154 548.5 443 62.5
RcHm_v2.0_Chr7g0190291 Rosa chinensis HOM05D005744 ORTHO05D007503 1.0e-153 547.4 427 64.9
MBI07_g31012_MAGBIO Magnolia biondii HOM05D005744 ORTHO05D007503 3.8e-153 545.4 426 63.1
SGA_v2.0_scaffold22G09828 Striga asiatica HOM05D005744 ORTHO05D007503 8.5e-153 544.3 419 66.6
FAN18G3767 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.1e-151 539.7 431 64.7
ATR0561G060 Amborella trichopoda HOM05D005744 ORTHO05D007503 1.2e-149 533.9 410 63.2
FvH4_5g08230 Fragaria vesca HOM05D005744 ORTHO05D007503 4.4e-149 531.9 430 64.0
FAN08G2910 Fragaria x ananassa HOM05D005744 ORTHO05D007503 4.8e-148 528.5 427 63.9
TAR629G2476 Trochodendron aralioides HOM05D005744 ORTHO05D007503 2.5e-144 516.2 339 74.0
FAN13G0489 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.3e-144 515.8 469 59.5
Os01g0101300 Oryza sativa ssp. japonica HOM05D005744 ORTHO05D007503 1.2e-143 513.8 429 59.2
RcHm_v2.0_Chr4g0409241 Rosa chinensis HOM05D005744 ORTHO05D007503 2.7e-138 496.1 422 60.7
TAR633G0019 Trochodendron aralioides HOM05D005744 ORTHO05D007503 2.8e-135 486.1 300 74.7
Sc04g0000680 Simmondsia chinensis HOM05D005744 ORTHO05D007503 6.1e-135 485.0 299 74.2
AT4G24880 Arabidopsis thaliana HOM05D005744 ORTHO05D007503 2.3e-134 483.0 343 68.2
Glyma.04G195500 Glycine max HOM05D005744 ORTHO05D007503 3.4e-133 479.2 319 70.2
SalBow5G5674 Salvia bowleyana HOM05D005744 ORTHO05D007503 2.2e-132 476.5 442 58.1
unitig_27.g25288 Utricularia gibba HOM05D005744 ORTHO05D007503 1.9e-131 473.4 426 57.5
Cpa.g.sc2981.2 Carica papaya HOM05D005744 ORTHO05D007503 3.2e-131 472.6 315 74.3
Zm00001eb354570 Zea mays HOM05D005744 ORTHO05D007503 1.5e-128 463.8 424 55.0
Aa31LG7G10960 Aethionema arabicum HOM05D005744 ORTHO05D007503 4.3e-128 462.2 302 71.9
PSO478G2520 Papaver somniferum HOM05D005744 ORTHO05D007503 7.3e-128 461.5 343 65.9
FvH4_4g11820 Fragaria vesca HOM05D005744 ORTHO05D007503 3.5e-122 442.6 421 55.1
FAN07G2643 Fragaria x ananassa HOM05D005744 ORTHO05D007503 4.6e-122 442.2 326 65.6
Pp3c8_11540 Physcomitrium patens HOM05D005744 ORTHO05D007503 4.6e-122 442.2 434 51.6
Mapoly0024s0037 Marchantia polymorpha HOM05D005744 ORTHO05D007503 1.3e-121 440.7 436 51.6
SMO364G0648 Selaginella moellendorffii HOM05D005744 ORTHO05D007503 3.0e-113 412.9 410 50.7
Nitab4.5_0000479g0030 Nicotiana tabacum HOM05D005744 ORTHO05D007503 8.1e-111 404.8 278 71.6
FAN12G3536 Fragaria x ananassa HOM05D005744 ORTHO05D007503 2.6e-101 373.2 320 58.8
SEGI_05259 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 3.0e-97 359.8 317 55.8
FAN12G3591 Fragaria x ananassa HOM05D005744 ORTHO05D007503 3.4e-93 346.3 302 57.6
Eucgr.L02977 Eucalyptus grandis HOM05D005744 ORTHO05D007503 1.2e-77 294.7 278 57.2
SEGI_21905 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 2.5e-75 287.0 183 67.8
MCO07G390 Micromonas commoda HOM05D005744 ORTHO05D007503 1.4e-70 271.2 356 39.6
SHI06365 Sapria himalayana HOM05D005744 ORTHO05D007503 1.2e-69 268.1 385 42.1
AagrBONN_evm.TU.Sc2ySwM_344.2997 Anthoceros agrestis HOM05D005744 ORTHO05D007503 1.4e-62 244.6 222 48.6
Cre16.g666000 Chlamydomonas reinhardtii HOM05D005744 ORTHO05D007503 3.0e-57 226.9 579 29.5
PRCOL_00001155 Prasinoderma coloniale HOM05D005744 ORTHO05D007503 1.2e-53 214.9 415 35.7
HanXRQChr10g0289761 Helianthus annuus HOM05D005744 ORTHO05D007503 3.3e-48 196.8 195 50.8
RcHm_v2.0_Chr4g0407951 Rosa chinensis HOM05D005744 ORTHO05D007503 2.0e-45 187.6 254 44.5
Lsat_1_v5_gn_8_77640 Lactuca sativa HOM05D005744 ORTHO05D007503 1.3e-44 184.9 135 69.6
COL.COLO4_31215 Corchorus olitorius HOM05D005744 ORTHO05D007503 1.7e-44 184.5 129 69.8
GSVIVG01008540001 Vitis vinifera HOM05D005744 ORTHO05D007503 3.4e-40 170.2 119 69.7
QL10p003231 Quercus lobata HOM05D005744 ORTHO05D007503 9.1e-38 162.2 117 66.7
CDE12G0192 Ceratophyllum demersum HOM05D005744 ORTHO05D007503 2.3e-25 120.9 149 49.7
Aa31LG7G10970 Aethionema arabicum HOM05D005744 ORTHO05D007503 4.0e-25 120.2 127 55.9
RcHm_v2.0_Chr4g0407901 Rosa chinensis HOM05D005744 ORTHO05D007503 1.5e-24 118.2 256 36.3
Lsat_1_v5_gn_8_150141 Lactuca sativa HOM05D005744 ORTHO05D048266 1.8e-22 111.3 104 51.9
TAR629G1577 Trochodendron aralioides HOM05D005744 ORTHO05D007503 1.6e-13 81.6 60 63.3
HanXRQChr10g0289791 Helianthus annuus HOM05D005744 ORTHO05D048266 3.1e-09 67.4 64 50.0
SEGI_17145 Sequoiadendron giganteum HOM05D005744 ORTHO05D007503 3.7e-07 60.5 62 53.2
CDE05G3540 Ceratophyllum demersum HOM05D005744 ORTHO05D130478 6.4e-07 59.7 123 38.2


User provided reference genes

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