Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 1.0e-48 196.4 99 100.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 5.9e-33 144.1 105 77.1
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.4e-29 132.9 102 71.6
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 1.8e-29 132.5 103 70.9
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.3e-29 132.1 103 69.9
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.5e-28 129.4 101 71.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 2.6e-28 128.6 98 68.4
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 7.5e-28 127.1 102 66.7
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 9.8e-28 126.7 96 74.0
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 1.3e-27 126.3 105 64.8
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.7e-27 125.9 100 69.0
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.7e-27 125.9 100 66.0
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 2.9e-27 125.2 100 67.0
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 4.9e-27 124.4 100 67.0
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 6.4e-27 124.0 103 62.1
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 1.8e-26 122.5 103 64.1
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 2.4e-26 122.1 103 67.0
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 2.4e-26 122.1 102 62.7
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 3.2e-26 121.7 102 61.8
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 3.2e-26 121.7 102 61.8
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 3.2e-26 121.7 102 61.8
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 3.2e-26 121.7 102 61.8
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 3.2e-26 121.7 102 64.7
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.2e-26 121.7 103 65.0
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.2e-26 121.7 102 64.7
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 5.4e-26 120.9 102 62.7
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 5.4e-26 120.9 100 65.0
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 5.4e-26 120.9 102 61.8
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 7.0e-26 120.6 103 62.1
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 7.0e-26 120.6 100 64.0
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 7.0e-26 120.6 100 66.0
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 7.0e-26 120.6 100 65.0
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 9.2e-26 120.2 102 63.7
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.2e-25 119.8 101 65.3
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-25 119.8 101 65.3
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 1.6e-25 119.4 100 66.0
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 2.0e-25 119.0 101 65.3
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 2.0e-25 119.0 102 62.7
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 2.7e-25 118.6 103 61.2
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 2.7e-25 118.6 96 67.7
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 3.5e-25 118.2 101 61.4
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 3.5e-25 118.2 101 61.4
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.5e-25 118.2 101 64.4
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 4.6e-25 117.9 102 61.8
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 5.9e-25 117.5 98 65.3
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 5.9e-25 117.5 102 63.7
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 7.8e-25 117.1 103 61.2
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 7.8e-25 117.1 103 58.3
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 7.8e-25 117.1 98 62.2
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 1.0e-24 116.7 100 62.0
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.0e-24 116.7 104 63.5
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.3e-24 116.3 103 60.2
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.7e-24 115.9 100 61.0
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 1.7e-24 115.9 102 60.8
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 1.7e-24 115.9 102 59.8
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.7e-24 115.9 101 63.4
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 1.7e-24 115.9 102 63.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.3e-24 115.5 104 61.5
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 3.0e-24 115.2 100 61.0
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 3.0e-24 115.2 102 61.8
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 3.0e-24 115.2 103 61.2
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 3.9e-24 114.8 98 62.2
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 3.9e-24 114.8 103 59.2
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 5.0e-24 114.4 102 62.7
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 5.0e-24 114.4 101 59.4
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 6.6e-24 114.0 98 62.2
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 8.6e-24 113.6 103 56.3
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 8.6e-24 113.6 97 62.9
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 8.6e-24 113.6 101 61.4
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 8.6e-24 113.6 102 62.7
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 8.6e-24 113.6 102 62.7
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 8.6e-24 113.6 103 58.3
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 1.5e-23 112.8 104 59.6
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 3.3e-23 111.7 98 60.2
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 3.3e-23 111.7 100 60.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 3.3e-23 111.7 102 61.8
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 4.3e-23 111.3 102 57.8
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 5.6e-23 110.9 103 60.2
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 7.3e-23 110.5 105 60.0
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 7.3e-23 110.5 104 58.7
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 1.2e-22 109.8 117 57.3
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 1.6e-22 109.4 101 59.4
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 2.1e-22 109.0 101 58.4
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 3.6e-22 108.2 105 55.2
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 4.7e-22 107.8 101 58.4
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 4.7e-22 107.8 101 57.4
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 4.7e-22 107.8 101 58.4
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 8.0e-22 107.1 78 73.1
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 8.0e-22 107.1 74 78.4
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 2.3e-21 105.5 102 58.8
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 2.3e-21 105.5 101 56.4
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 3.1e-21 105.1 101 57.4
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 3.1e-21 105.1 101 55.4
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 3.1e-21 105.1 100 57.0
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 4.0e-21 104.8 100 57.0
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 5.2e-21 104.4 79 68.4
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 8.9e-21 103.6 76 71.1
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.5e-20 102.8 76 69.7
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 2.0e-20 102.4 102 55.9
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 2.0e-20 102.4 101 54.5
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 7.5e-20 100.5 102 52.9
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 1.3e-19 99.8 101 54.5
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 1.3e-19 99.8 101 54.5
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 1.3e-19 99.8 78 70.5
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 6.4e-19 97.4 76 64.5
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.4e-18 95.5 80 60.0
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 3.2e-18 95.1 76 64.5
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 1.2e-17 93.2 91 56.0
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.7e-16 89.4 76 59.2
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 1.7e-16 89.4 102 49.0
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 2.3e-16 89.0 79 58.2
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 3.0e-16 88.6 102 46.1
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 2.5e-15 85.5 83 56.6
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 1.2e-14 83.2 75 58.7
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 2.1e-14 82.4 78 53.8
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 8.1e-14 80.5 102 48.0
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 1.1e-13 80.1 74 59.5
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 4.0e-13 78.2 102 48.0
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 7.5e-12 73.9 104 41.3
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 8.3e-11 70.5 79 43.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 7.1e-10 67.4 77 44.2
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 7.8e-09 63.9 54 64.8
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 3.9e-08 61.6 51 54.9
BcaC07g40760 Brassica carinata HOM05D002674 ORTHO05D008041 9.5e-07 57.0 52 57.7
BolC8t51336H Brassica oleracea HOM05D002674 ORTHO05D008041 9.5e-07 57.0 52 57.7
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 9.5e-07 57.0 76 42.1


User provided reference genes

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