Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010607.1 Olea europaea HOM05D005857 ORTHO05D007193 2.0e-39 165.2 80 100.0
SalBow1G1563 Salvia bowleyana HOM05D005857 ORTHO05D007193 2.7e-28 128.3 67 86.6
Oeu000158.1 Olea europaea HOM05D005857 ORTHO05D007193 3.6e-28 127.9 84 77.4
SGA_v2.0_scaffold100G29556 Striga asiatica HOM05D001195 ORTHO05D001138 8.8e-27 123.2 68 85.3
Migut.B00707 Erythranthe guttata HOM05D005857 ORTHO05D007193 2.0e-26 122.1 67 82.1
Manes.14G164233 Manihot esculenta HOM05D005857 ORTHO05D007193 5.3e-24 114.0 67 76.1
Potri.004G229900 Populus trichocarpa HOM05D005857 ORTHO05D007193 9.1e-24 113.2 66 80.3
CANSAT01G1822 Cannabis sativa HOM05D005857 ORTHO05D007193 2.0e-23 112.1 72 68.1
Cpa.g.sc34.126 Carica papaya HOM05D005857 ORTHO05D007193 2.0e-23 112.1 68 76.5
DCAR_001733 Daucus carota HOM05D005857 ORTHO05D007193 3.4e-23 111.3 67 77.6
CSS0043387 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 4.5e-23 110.9 62 85.5
CSS0006636 Camellia sinensis var. sinensis HOM05D005857 ORTHO05D007193 5.9e-23 110.5 62 85.5
PGR042G3007 Punica granatum HOM05D005857 ORTHO05D007193 5.9e-23 110.5 69 71.0
vmacro01623 Vaccinium macrocarpon HOM05D005857 ORTHO05D007193 7.7e-23 110.2 62 82.3
Manes.06G013700 Manihot esculenta HOM05D005857 ORTHO05D007193 1.3e-22 109.4 67 73.1
Cc08_g11670 Coffea canephora HOM05D005857 ORTHO05D007193 1.7e-22 109.0 62 83.9
PSO210G5758 Papaver somniferum HOM05D005857 ORTHO05D007193 1.7e-22 109.0 67 74.6
TWI23G0165 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 1.7e-22 109.0 66 77.3
PSO447G0367 Papaver somniferum HOM05D005857 ORTHO05D007193 2.2e-22 108.6 67 74.6
Thecc.06G020800 Theobroma cacao HOM05D005857 ORTHO05D007193 2.2e-22 108.6 67 73.1
CiPaw.06G177300 Carya illinoinensis HOM05D005857 ORTHO05D007193 2.9e-22 108.2 71 70.4
Gohir.A05G160000 Gossypium hirsutum HOM05D005857 ORTHO05D007193 5.0e-22 107.5 60 80.0
Gohir.D05G162700 Gossypium hirsutum HOM05D005857 ORTHO05D007193 5.0e-22 107.5 60 80.0
Gorai.009G167700 Gossypium raimondii HOM05D005857 ORTHO05D007193 5.0e-22 107.5 60 80.0
Nitab4.5_0006159g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 6.5e-22 107.1 73 74.0
COL.COLO4_31107 Corchorus olitorius HOM05D005857 ORTHO05D007193 1.1e-21 106.3 69 72.5
TWI59G0768 Tripterygium wilfordii HOM05D005857 ORTHO05D007193 1.1e-21 106.3 73 72.6
QL02p103650 Quercus lobata HOM05D005857 ORTHO05D007193 1.4e-21 105.9 68 72.1
FvH4_5g27520 Fragaria vesca HOM05D005857 ORTHO05D007193 2.5e-21 105.1 66 74.2
Lsat_1_v5_gn_9_83180 Lactuca sativa HOM05D005857 ORTHO05D007193 2.5e-21 105.1 64 79.7
Nitab4.5_0000521g0060 Nicotiana tabacum HOM05D005857 ORTHO05D007193 2.5e-21 105.1 73 71.2
Aqoxy5G01841 Aquilegia oxysepala HOM05D005857 ORTHO05D007193 3.2e-21 104.8 60 78.3
Duzib133G0295 Durio zibethinus HOM05D005857 ORTHO05D007193 3.2e-21 104.8 63 76.2
TAR628G1233 Trochodendron aralioides HOM05D005857 ORTHO05D007193 3.2e-21 104.8 67 71.6
Solyc01g102830.3 Solanum lycopersicum HOM05D005857 ORTHO05D007193 5.5e-21 104.0 73 71.2
Sopen01g045230 Solanum pennellii HOM05D005857 ORTHO05D007193 5.5e-21 104.0 73 71.2
CAN.G1379.7 Capsicum annuum HOM05D005857 ORTHO05D007193 7.2e-21 103.6 67 74.6
PGSC0003DMG400018258 Solanum tuberosum HOM05D005857 ORTHO05D007193 7.2e-21 103.6 73 71.2
Lalb_Chr12g0195891 Lupinus albus HOM05D005857 ORTHO05D007193 9.4e-21 103.2 68 75.0
RcHm_v2.0_Chr7g0218891 Rosa chinensis HOM05D005857 ORTHO05D007193 9.4e-21 103.2 65 73.8
CsaV3_5G027560 Cucumis sativus L. HOM05D005857 ORTHO05D007193 1.2e-20 102.8 78 65.4
HanXRQChr11g0343801 Helianthus annuus HOM05D005857 ORTHO05D007193 1.2e-20 102.8 66 74.2
C02p50660 Brassica napus HOM05D005857 ORTHO05D007193 1.6e-20 102.4 71 64.8
BolC2t11149H Brassica oleracea HOM05D005857 ORTHO05D007193 1.6e-20 102.4 71 64.8
BraA02t08316Z Brassica rapa HOM05D005857 ORTHO05D007193 1.6e-20 102.4 71 64.8
Carub.0005s0154 Capsella rubella HOM05D005857 ORTHO05D007193 1.6e-20 102.4 71 64.8
CARHR145070 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.6e-20 102.4 71 64.8
ECA236G3879 Erigeron canadensis HOM05D005857 ORTHO05D007193 2.1e-20 102.1 65 75.4
AT2G02510 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 2.7e-20 101.7 71 63.4
BolC5t29979H Brassica oleracea HOM05D005857 ORTHO05D007193 2.7e-20 101.7 72 65.3
Sp1g12820 Schrenkiella parvula HOM05D005857 ORTHO05D007193 3.6e-20 101.3 72 65.3
Cfa004425 Carpinus fangiana HOM05D005857 ORTHO05D007193 4.7e-20 100.9 58 77.6
Haze_09965 Corylus avellana HOM05D005857 ORTHO05D007193 4.7e-20 100.9 58 77.6
Sed0006374 Sechium edule HOM05D005857 ORTHO05D007193 4.7e-20 100.9 56 78.6
Sc03g0005520 Simmondsia chinensis HOM05D005857 ORTHO05D007193 4.7e-20 100.9 64 78.1
BcaB07g30330 Brassica carinata HOM05D005857 ORTHO05D007193 6.1e-20 100.5 71 63.4
AL5G11780 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 7.9e-20 100.1 71 62.0
BcaB03g13096 Brassica carinata HOM05D005857 ORTHO05D007193 7.9e-20 100.1 73 63.0
BcaC03g17146 Brassica carinata HOM05D005857 ORTHO05D007193 1.0e-19 99.8 71 64.8
A06p10470 Brassica napus HOM05D005857 ORTHO05D007193 1.0e-19 99.8 73 63.0
C05p12250 Brassica napus HOM05D005857 ORTHO05D007193 1.0e-19 99.8 73 63.0
BraA06t24227Z Brassica rapa HOM05D005857 ORTHO05D007193 1.0e-19 99.8 73 63.0
Peaxi162Scf00194g01021 Petunia axillaris HOM05D005857 ORTHO05D007193 1.4e-19 99.4 58 77.6
C08p16740 Brassica napus HOM05D005857 ORTHO05D007193 1.8e-19 99.0 73 63.0
Aa31LG2G7600 Aethionema arabicum HOM05D005857 ORTHO05D007193 3.0e-19 98.2 72 62.5
Thhalv10005238m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 3.0e-19 98.2 63 66.7
Thhalv10009257m.g Eutrema salsugineum HOM05D005857 ORTHO05D007193 3.0e-19 98.2 72 62.5
Zm00001eb244200 Zea mays HOM05D005857 ORTHO05D007193 3.0e-19 98.2 61 70.5
AL1G26340 Arabidopsis lyrata HOM05D005857 ORTHO05D007193 3.9e-19 97.8 72 63.9
AT1G14450 Arabidopsis thaliana HOM05D005857 ORTHO05D007193 3.9e-19 97.8 72 63.9
Sp2g13760 Schrenkiella parvula HOM05D005857 ORTHO05D007193 3.9e-19 97.8 71 62.0
BcaC05g25348 Brassica carinata HOM05D005857 ORTHO05D007193 5.1e-19 97.4 64 70.3
CiPaw.05G001000 Carya illinoinensis HOM05D005857 ORTHO05D007193 5.1e-19 97.4 72 63.9
MD15G1444100 Malus domestica HOM05D005857 ORTHO05D007193 5.1e-19 97.4 78 64.1
FAN18G0749 Fragaria x ananassa HOM05D005857 ORTHO05D007193 6.7e-19 97.1 53 79.2
MD08G1249300 Malus domestica HOM05D005857 ORTHO05D007193 6.7e-19 97.1 79 62.0
Os02g0564200 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 6.7e-19 97.1 61 68.9
THA.LOC104801779 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 6.7e-19 97.1 63 66.7
ATR1089G102 Amborella trichopoda HOM05D005857 ORTHO05D007193 8.8e-19 96.7 54 81.5
BcaB08g34397 Brassica carinata HOM05D005857 ORTHO05D007193 8.8e-19 96.7 70 64.3
Glyma.17G002300 Glycine max HOM05D005857 ORTHO05D007193 8.8e-19 96.7 57 75.4
CARHR014900 Cardamine hirsuta HOM05D005857 ORTHO05D007193 1.1e-18 96.3 72 61.1
MBI03_g21081_MAGBIO Magnolia biondii HOM05D005857 ORTHO05D007193 1.1e-18 96.3 52 82.7
Prupe.1G586500 Prunus persica HOM05D005857 ORTHO05D007193 1.1e-18 96.3 79 60.8
FAN04G0073 Fragaria x ananassa HOM05D005857 ORTHO05D007193 1.5e-18 95.9 53 79.2
HanXRQChr10g0285581 Helianthus annuus HOM05D005857 ORTHO05D007193 3.3e-18 94.7 66 71.2
Carub.0001s1416 Capsella rubella HOM05D005857 ORTHO05D007193 4.4e-18 94.4 70 62.9
THA.LOC104805131 Tarenaya hassleriana HOM05D005857 ORTHO05D007193 7.4e-18 93.6 63 63.5
FAN08G0400 Fragaria x ananassa HOM05D005857 ORTHO05D007193 2.2e-17 92.0 47 85.1
Aa31LG1G600 Aethionema arabicum HOM05D005857 ORTHO05D007193 4.8e-17 90.9 63 63.5
AUR62040136 Chenopodium quinoa HOM05D005857 ORTHO05D007193 6.3e-17 90.5 69 63.8
TPR.G6546 Trifolium pratense HOM05D005857 ORTHO05D007193 6.3e-17 90.5 56 73.2
Ciclev10003046m.g Citrus clementina HOM05D005857 ORTHO05D007193 8.2e-17 90.1 72 61.1
FAN13G1483 Fragaria x ananassa HOM05D005857 ORTHO05D007193 8.2e-17 90.1 59 71.2
SHI07423 Sapria himalayana HOM05D005857 ORTHO05D007193 1.1e-16 89.7 58 70.7
Nitab4.5_0001085g0140 Nicotiana tabacum HOM05D005857 ORTHO05D007193 1.4e-16 89.4 62 66.1
unitig_8.g2962 Utricularia gibba HOM05D005857 ORTHO05D007193 1.4e-16 89.4 47 78.7
Atru.chr6.134 Acer truncatum HOM05D005857 ORTHO05D007193 1.8e-16 89.0 70 65.7
Atru.chr6.187 Acer truncatum HOM05D005857 ORTHO05D007193 1.8e-16 89.0 70 65.7
Lj4g0009904 Lotus japonicus HOM05D005857 ORTHO05D007193 1.8e-16 89.0 57 73.7
Ciclev10003044m.g Citrus clementina HOM05D005857 ORTHO05D007193 2.4e-16 88.6 72 59.7
Lsat_1_v5_gn_9_124880 Lactuca sativa HOM05D005857 ORTHO05D007193 2.4e-16 88.6 65 66.2
Phvul.003G091000 Phaseolus vulgaris HOM05D005857 ORTHO05D007193 3.1e-16 88.2 57 68.4
Medtr4g134550 Medicago truncatula HOM05D005857 ORTHO05D007193 5.3e-16 87.4 57 70.2
Psat0s2555g0160 Pisum sativum HOM05D005857 ORTHO05D007193 5.3e-16 87.4 57 68.4
AUR62032483 Chenopodium quinoa HOM05D005857 ORTHO05D007193 7.0e-16 87.0 69 62.3
Ca_13524_v3 Cicer arietinum L. HOM05D005857 ORTHO05D007193 1.6e-15 85.9 56 69.6
MD11G1276400 Malus domestica HOM05D005857 ORTHO05D007193 1.6e-15 85.9 80 60.0
BcaC07g41575 Brassica carinata HOM05D005857 ORTHO05D007193 2.0e-15 85.5 72 58.3
Actinidia11730 Actinidia chinensis HOM05D005857 ORTHO05D007193 4.5e-15 84.3 46 78.3
Nitab4.5_0008987g0050 Nicotiana tabacum HOM05D005857 ORTHO05D007193 5.9e-15 84.0 55 69.1
Psat4g149960 Pisum sativum HOM05D005857 ORTHO05D007193 1.1e-13 79.7 57 63.2
EL10Ac3g06399 Beta vulgaris HOM05D005857 ORTHO05D007193 1.5e-13 79.3 49 65.3
Nitab4.5_0004030g0040 Nicotiana tabacum HOM05D005857 ORTHO05D007193 4.2e-13 77.8 54 63.0
A02p32930 Brassica napus HOM05D005857 ORTHO05D007193 2.7e-12 75.1 61 59.0
Zm00001eb353890 Zea mays HOM05D005857 ORTHO05D007193 2.7e-12 75.1 50 66.0
Zm00001eb182520 Zea mays HOM05D005857 ORTHO05D007193 4.7e-12 74.3 77 50.6
BolC8t49293H Brassica oleracea HOM05D005857 ORTHO05D007193 6.7e-11 70.5 37 78.4
Zm00001eb203220 Zea mays HOM05D005857 ORTHO05D007193 5.7e-10 67.4 50 56.0
Pp3c9_5250 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.3e-09 66.2 59 49.2
Zm00001eb203730 Zea mays HOM05D005857 ORTHO05D007193 2.2e-09 65.5 49 55.1
Os07g0175750 Oryza sativa ssp. japonica HOM05D005857 ORTHO05D007193 2.7e-07 58.5 45 55.6
GSVIVG01023132001 Vitis vinifera HOM05D005857 ORTHO05D007193 3.5e-07 58.2 30 80.0
Mapoly0052s0008 Marchantia polymorpha HOM05D005857 ORTHO05D007193 1.3e-06 56.2 54 46.3
Pp3c15_3960 Physcomitrium patens HOM05D005857 ORTHO05D007193 1.7e-06 55.8 55 45.5
Medtr2g036340 Medicago truncatula HOM05D005857 ORTHO05D007193 2.9e-06 55.1 56 48.2
Medtr8g046930 Medicago truncatula HOM05D005857 ORTHO05D007193 2.9e-06 55.1 56 48.2


User provided reference genes

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