Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010405.1 Olea europaea HOM05D000172 ORTHO05D000781 4.1e-31 137.5 73 100.0
Oeu018583.1 Olea europaea HOM05D000172 ORTHO05D000781 2.2e-24 115.2 72 81.9
Oeu010407.1 Olea europaea HOM05D000172 ORTHO05D000781 3.1e-23 111.3 72 79.2
Oeu045543.1 Olea europaea HOM05D000172 ORTHO05D000781 4.1e-23 110.9 72 80.6
MSTRG.16710 Avicennia marina HOM05D000172 ORTHO05D000781 3.8e-21 104.4 72 76.4
Migut.B00393 Erythranthe guttata HOM05D000172 ORTHO05D000781 8.0e-19 96.7 72 72.2
Peaxi162Scf00152g00236 Petunia axillaris HOM05D000172 ORTHO05D000781 2.3e-18 95.1 72 69.4
Prupe.8G135900 Prunus persica HOM05D000172 ORTHO05D000781 8.9e-18 93.2 72 65.3
Rhsim11G0159500 Rhododendron simsii HOM05D000172 ORTHO05D000781 8.9e-18 93.2 72 69.4
arahy.Tifrunner.gnm1.ann1.5497SD Arachis hypogaea HOM05D000172 ORTHO05D000781 2.0e-17 92.0 72 69.4
arahy.Tifrunner.gnm1.ann1.H077MW Arachis hypogaea HOM05D000172 ORTHO05D000781 2.0e-17 92.0 72 69.4
Haze_10181 Corylus avellana HOM05D000172 ORTHO05D000781 4.4e-17 90.9 72 66.7
SGA_v2.0_scaffold225G43067 Striga asiatica HOM05D000172 ORTHO05D000781 4.4e-17 90.9 72 68.1
GSVIVG01037920001 Vitis vinifera HOM05D000172 ORTHO05D000781 4.4e-17 90.9 72 61.1
Cfa004588 Carpinus fangiana HOM05D000172 ORTHO05D000781 5.7e-17 90.5 72 65.3
Cc02_g19300 Coffea canephora HOM05D000172 ORTHO05D000781 7.5e-17 90.1 72 65.3
Cc02_g19310 Coffea canephora HOM05D000172 ORTHO05D000781 7.5e-17 90.1 72 65.3
MD10G1098600 Malus domestica HOM05D000172 ORTHO05D000781 7.5e-17 90.1 72 62.5
Glyma.10G262850 Glycine max HOM05D000172 ORTHO05D000781 9.8e-17 89.7 72 65.3
Glyma.20G127800 Glycine max HOM05D000172 ORTHO05D000781 9.8e-17 89.7 72 66.7
QL11p033375 Quercus lobata HOM05D000172 ORTHO05D000781 9.8e-17 89.7 72 63.9
CSS0020672 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 1.3e-16 89.4 72 63.9
CSS0028991 Camellia sinensis var. sinensis HOM05D000172 ORTHO05D000781 1.3e-16 89.4 72 63.9
CiPaw.05G012100 Carya illinoinensis HOM05D000172 ORTHO05D000781 1.3e-16 89.4 72 63.9
Lj5g0008199 Lotus japonicus HOM05D000172 ORTHO05D000781 1.3e-16 89.4 72 68.1
Actinidia00407 Actinidia chinensis HOM05D000172 ORTHO05D000781 1.7e-16 89.0 72 63.9
Hma1.2p1_0796F.1_g219270 Hydrangea macrophylla HOM05D000172 ORTHO05D000781 1.7e-16 89.0 72 66.7
Lj5C214T14 Lonicera japonica HOM05D000172 ORTHO05D000781 1.7e-16 89.0 72 65.3
RcHm_v2.0_Chr6g0254931 Rosa chinensis HOM05D000172 ORTHO05D000781 2.2e-16 88.6 72 61.1
vmacro02000 Vaccinium macrocarpon HOM05D000172 ORTHO05D000781 2.2e-16 88.6 72 65.3
COL.COLO4_32584 Corchorus olitorius HOM05D000172 ORTHO05D000781 2.8e-16 88.2 72 63.9
Gohir.A12G021700 Gossypium hirsutum HOM05D000172 ORTHO05D000781 2.8e-16 88.2 72 62.5
Gohir.D12G022200 Gossypium hirsutum HOM05D000172 ORTHO05D000781 2.8e-16 88.2 72 62.5
Gorai.008G022600 Gossypium raimondii HOM05D000172 ORTHO05D000781 2.8e-16 88.2 72 62.5
TPR.G3257 Trifolium pratense HOM05D000172 ORTHO05D000781 2.8e-16 88.2 72 66.7
VMungo0720G2067 Vigna mungo HOM05D004179 ORTHO05D005248 2.8e-16 88.2 72 65.3
Aa31LG8G13080 Aethionema arabicum HOM05D000172 ORTHO05D000781 3.7e-16 87.8 72 59.7
FvH4_2g05050 Fragaria vesca HOM05D000172 ORTHO05D000781 3.7e-16 87.8 72 63.9
FAN20G3184 Fragaria x ananassa HOM05D000172 ORTHO05D000781 3.7e-16 87.8 72 63.9
Nitab4.5_0000292g0050 Nicotiana tabacum HOM05D000172 ORTHO05D000781 3.7e-16 87.8 72 63.9
Phvul.007G039100 Phaseolus vulgaris HOM05D000172 ORTHO05D000781 3.7e-16 87.8 72 63.9
TAR376G1010 Trochodendron aralioides HOM05D000172 ORTHO05D000781 3.7e-16 87.8 72 63.9
Aqoxy6G02848 Aquilegia oxysepala HOM05D000172 ORTHO05D000781 6.3e-16 87.0 72 62.5
Dinv15768 Davidia involucrata HOM05D000172 ORTHO05D000781 6.3e-16 87.0 72 62.5
Eucgr.I01102 Eucalyptus grandis HOM05D000172 ORTHO05D000781 8.3e-16 86.7 72 63.9
Medtr1g107330 Medicago truncatula HOM05D000172 ORTHO05D000781 8.3e-16 86.7 72 65.3
Duzib132G0167 Durio zibethinus HOM05D000172 ORTHO05D000781 1.1e-15 86.3 72 62.5
Lalb_Chr06g0165421 Lupinus albus HOM05D000172 ORTHO05D000781 1.1e-15 86.3 72 62.5
Nitab4.5_0002894g0010 Nicotiana tabacum HOM05D000172 ORTHO05D000781 1.1e-15 86.3 72 62.5
Potri.009G094900 Populus trichocarpa HOM05D000172 ORTHO05D000781 1.1e-15 86.3 72 63.9
CAN.G13.8 Capsicum annuum HOM05D000172 ORTHO05D000781 1.4e-15 85.9 72 62.5
Psat6g217800 Pisum sativum HOM05D000172 ORTHO05D000781 1.4e-15 85.9 72 62.5
Thecc.02G109100 Theobroma cacao HOM05D000172 ORTHO05D000781 1.4e-15 85.9 72 63.9
CANSAT25G0132 Cannabis sativa HOM05D000172 ORTHO05D000781 1.8e-15 85.5 72 59.7
CANSAT25G3736 Cannabis sativa HOM05D000172 ORTHO05D000781 1.8e-15 85.5 72 59.7
FAN15G3207 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.8e-15 85.5 72 62.5
FAN27G2874 Fragaria x ananassa HOM05D000172 ORTHO05D000781 1.8e-15 85.5 72 62.5
Nn5g30430 Nelumbo nucifera HOM05D000172 ORTHO05D000781 1.8e-15 85.5 72 59.7
EL10Ac9g22267 Beta vulgaris HOM05D000172 ORTHO05D000781 2.4e-15 85.1 69 62.3
CARHR105620 Cardamine hirsuta HOM05D000172 ORTHO05D000781 2.4e-15 85.1 72 59.7
Sabra09G0073200 Salix brachista HOM05D000172 ORTHO05D000781 2.4e-15 85.1 72 63.9
Sc14g0001870 Simmondsia chinensis HOM05D000172 ORTHO05D000781 3.2e-15 84.7 69 62.3
AL3G46940 Arabidopsis lyrata HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 59.7
AT2G15230 Arabidopsis thaliana HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 59.7
BcaB03g16245 Brassica carinata HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 59.7
Thhalv10022719m.g Eutrema salsugineum HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 59.7
Manes.07G070900 Manihot esculenta HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 59.7
Solyc11g032200.2 Solanum lycopersicum HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 61.1
Sopen11g015400 Solanum pennellii HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 61.1
THA.LOC104807237 Tarenaya hassleriana HOM05D000172 ORTHO05D000781 4.1e-15 84.3 72 59.7
Carub.0003s2907 Capsella rubella HOM05D000172 ORTHO05D000781 5.4e-15 84.0 72 61.1
DCAR_001651 Daucus carota HOM05D000172 ORTHO05D000781 5.4e-15 84.0 69 68.1
ECA234G4284 Erigeron canadensis HOM05D000172 ORTHO05D000781 5.4e-15 84.0 72 61.1
HanXRQChr10g0296971 Helianthus annuus HOM05D000172 ORTHO05D000781 7.0e-15 83.6 69 65.2
FAN24G2782 Fragaria x ananassa HOM05D000172 ORTHO05D000781 9.2e-15 83.2 72 59.7
Lsat_1_v5_gn_5_116180 Lactuca sativa HOM05D000172 ORTHO05D000781 9.2e-15 83.2 69 66.7
BcaC06g36039 Brassica carinata HOM05D000172 ORTHO05D000781 1.6e-14 82.4 72 58.3
A07p05390 Brassica napus HOM05D000172 ORTHO05D000781 1.6e-14 82.4 72 58.3
C07p08650 Brassica napus HOM05D000172 ORTHO05D000781 1.6e-14 82.4 72 58.3
BolC7t41277H Brassica oleracea HOM05D000172 ORTHO05D000781 1.6e-14 82.4 72 58.3
BraA07t28333Z Brassica rapa HOM05D000172 ORTHO05D000781 1.6e-14 82.4 72 58.3
Cpa.g.sc106.100 Carica papaya HOM05D000172 ORTHO05D000781 1.6e-14 82.4 72 61.1
Atru.chr5.2514 Acer truncatum HOM05D000172 ORTHO05D000781 3.5e-14 81.3 72 62.5
PSO675G8798 Papaver somniferum HOM05D000172 ORTHO05D000781 3.5e-14 81.3 69 63.8
Sp3g28470 Schrenkiella parvula HOM05D000172 ORTHO05D000781 3.5e-14 81.3 72 55.6
Ca_11069_v3 Cicer arietinum L. HOM05D000172 ORTHO05D000781 4.6e-14 80.9 72 59.7
PSO541G5053 Papaver somniferum HOM05D000172 ORTHO05D000781 4.6e-14 80.9 69 60.9
PGR142G0361 Punica granatum HOM05D000172 ORTHO05D000781 4.6e-14 80.9 72 61.1
AUR62039069 Chenopodium quinoa HOM05D000172 ORTHO05D000781 5.9e-14 80.5 69 62.3
Ciclev10028553m.g Citrus clementina HOM05D000172 ORTHO05D000781 5.9e-14 80.5 72 61.1
AUR62010317 Chenopodium quinoa HOM05D000172 ORTHO05D000781 7.8e-14 80.1 69 60.9
Lsat_1_v5_gn_5_116261 Lactuca sativa HOM05D000172 ORTHO05D000781 7.8e-14 80.1 68 64.7
ATR0205G013 Amborella trichopoda HOM05D000172 ORTHO05D000781 1.7e-13 79.0 72 52.8
unitig_0.g101 Utricularia gibba HOM05D000172 ORTHO05D000781 2.3e-13 78.6 72 56.9
HPP92_008253 Vanilla planifolia HOM05D000172 ORTHO05D000781 2.9e-13 78.2 72 56.9
CsaV3_7G008200 Cucumis sativus L. HOM05D000172 ORTHO05D000781 5.0e-13 77.4 69 60.9
Os09g0103100 Oryza sativa ssp. japonica HOM05D000172 ORTHO05D000781 6.6e-13 77.0 72 54.2
TWI79G1031 Tripterygium wilfordii HOM05D000172 ORTHO05D000781 6.6e-13 77.0 72 56.9
ClCG02G006410 Citrullus lanatus HOM05D000172 ORTHO05D000781 1.9e-12 75.5 72 56.9
PSO210G7133 Papaver somniferum HOM05D000172 ORTHO05D000781 3.3e-12 74.7 72 56.9
Zm00001eb307440 Zea mays HOM05D000172 ORTHO05D000781 3.3e-12 74.7 72 51.4
PSO170G6860 Papaver somniferum HOM05D000172 ORTHO05D000781 1.2e-11 72.8 72 55.6
CDE02G2713 Ceratophyllum demersum HOM05D000172 ORTHO05D000781 3.6e-11 71.2 72 51.4
SEGI_32303 Sequoiadendron giganteum HOM05D000172 ORTHO05D000781 3.6e-11 71.2 72 54.2
SEGI_36667 Sequoiadendron giganteum HOM05D000172 ORTHO05D000781 3.6e-11 71.2 72 54.2
Sed0009779 Sechium edule HOM05D000172 ORTHO05D000781 1.4e-10 69.3 69 56.5
CAN.G13.6 Capsicum annuum HOM05D000172 ORTHO05D000781 4.0e-10 67.8 72 52.8
MD07G1023500 Malus domestica HOM05D000172 ORTHO05D000781 2.0e-09 65.5 55 58.2
Pp3c8_1920 Physcomitrium patens HOM05D000172 ORTHO05D000781 4.4e-09 64.3 58 55.2
MD07G1242400 Malus domestica HOM05D000172 ORTHO05D000781 5.8e-09 63.9 53 66.0
Mapoly0134s0021 Marchantia polymorpha HOM05D000172 ORTHO05D000781 2.2e-08 62.0 58 56.9
AagrBONN_evm.TU.Sc2ySwM_228.409 Anthoceros agrestis HOM05D000172 ORTHO05D000781 1.1e-07 59.7 59 54.2
SMO118G0483 Selaginella moellendorffii HOM05D000172 ORTHO05D000781 1.1e-07 59.7 60 53.3
Hund06313 Selenicereus undatus HOM05D000172 ORTHO05D000781 1.2e-06 56.2 69 47.8
Pp3c3_34940 Physcomitrium patens HOM05D000172 ORTHO05D000781 1.6e-06 55.8 59 47.5
DCAR_021983 Daucus carota HOM05D000172 ORTHO05D000781 2.0e-06 55.5 72 38.9
Potri.014G159800 Populus trichocarpa HOM05D000172 ORTHO05D000781 2.7e-06 55.1 69 42.0
TAR624G1179 Trochodendron aralioides HOM05D000172 ORTHO05D000781 2.7e-06 55.1 69 40.6
TAR381G0814 Trochodendron aralioides HOM05D000172 ORTHO05D000781 3.5e-06 54.7 48 60.4
Thecc.01G183700 Theobroma cacao HOM05D000172 ORTHO05D000781 7.8e-06 53.5 72 40.3


User provided reference genes

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