Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 2.3e-108 395.6 201 100.0
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 4.1e-81 305.1 186 84.4
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 8.3e-66 254.2 187 71.1
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 1.1e-65 253.8 187 69.0
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.4e-65 253.4 186 69.4
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 3.5e-64 248.8 188 69.7
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 4.5e-64 248.4 171 73.7
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 8.6e-63 244.2 186 68.8
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.9e-62 243.0 186 68.8
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.9e-62 243.0 186 68.8
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 4.2e-62 241.9 188 69.7
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 5.5e-62 241.5 187 67.9
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 2.8e-61 239.2 186 67.2
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 2.3e-60 236.1 190 68.4
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 4.0e-60 235.3 188 67.0
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 5.2e-60 235.0 188 68.1
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 6.8e-60 234.6 188 68.1
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 3.4e-59 232.3 186 66.7
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 7.5e-59 231.1 186 66.1
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 9.8e-59 230.7 214 59.3
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 2.0e-56 223.0 177 68.9
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 5.9e-56 221.5 155 74.2
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 5.9e-56 221.5 189 67.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 5.9e-56 221.5 190 65.8
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.0e-55 220.7 188 63.8
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 1.7e-55 219.9 191 64.9
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 2.3e-55 219.5 177 68.9
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 2.3e-55 219.5 188 66.5
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 5.0e-55 218.4 188 64.4
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 8.6e-55 217.6 165 70.9
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.9e-54 216.5 187 63.1
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 4.3e-54 215.3 187 62.6
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 9.5e-54 214.2 190 64.7
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 1.2e-53 213.8 188 63.8
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.6e-53 213.4 196 62.8
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 2.8e-53 212.6 192 62.5
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 4.7e-53 211.8 187 63.1
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 8.0e-53 211.1 191 60.7
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 1.0e-52 210.7 192 62.0
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.4e-52 210.3 187 63.6
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.4e-52 210.3 187 63.6
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.4e-52 210.3 158 69.6
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 4.0e-52 208.8 198 60.6
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 5.2e-52 208.4 188 62.2
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 5.2e-52 208.4 188 62.2
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 6.8e-52 208.0 192 59.4
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 8.9e-52 207.6 187 62.6
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.2e-51 207.2 155 68.4
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.5e-51 206.8 191 61.3
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 2.0e-51 206.5 191 62.3
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.6e-51 206.1 187 62.6
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 2.6e-51 206.1 191 62.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 4.4e-51 205.3 195 59.5
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.4e-51 205.3 195 59.5
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.4e-51 205.3 195 59.5
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 7.5e-51 204.5 192 59.9
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 9.8e-51 204.1 191 60.7
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.2e-50 203.0 174 63.8
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.9e-50 202.6 189 61.9
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 4.9e-50 201.8 188 61.2
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 8.3e-50 201.1 186 61.8
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 8.3e-50 201.1 187 62.6
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.1e-49 200.7 144 71.5
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.9e-49 199.9 194 59.8
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 3.2e-49 199.1 187 61.5
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 9.2e-49 197.6 169 62.7
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 9.2e-49 197.6 176 60.8
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 9.2e-49 197.6 153 66.7
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 9.2e-49 197.6 185 56.8
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 9.2e-49 197.6 197 60.4
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 1.2e-48 197.2 135 74.1
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 2.0e-48 196.4 145 70.3
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.7e-48 196.1 176 60.2
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 3.5e-48 195.7 175 61.7
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 6.0e-48 194.9 188 64.9
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.7e-47 193.4 154 68.8
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 3.9e-47 192.2 201 57.2
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 5.0e-47 191.8 143 69.9
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 6.6e-47 191.4 154 65.6
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 6.6e-47 191.4 141 70.9
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.1e-46 190.7 200 58.5
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 1.5e-46 190.3 196 59.2
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 1.5e-46 190.3 188 58.5
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.9e-46 189.9 193 55.4
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 1.9e-46 189.9 188 58.0
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 3.3e-46 189.1 172 60.5
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 3.3e-46 189.1 194 58.2
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 4.3e-46 188.7 141 70.9
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 4.3e-46 188.7 188 59.6
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 5.6e-46 188.3 148 67.6
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 7.3e-46 188.0 183 61.2
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 1.6e-45 186.8 146 70.5
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 2.1e-45 186.4 176 58.5
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 2.8e-45 186.0 176 59.1
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 2.8e-45 186.0 149 66.4
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 4.0e-44 182.2 194 56.2
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 5.2e-44 181.8 154 60.4
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 8.9e-44 181.0 156 64.7
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 4.4e-43 178.7 203 55.2
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 5.8e-43 178.3 179 58.7
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 5.8e-43 178.3 176 59.7
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 9.8e-43 177.6 158 63.9
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 2.7e-40 169.5 188 53.2
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.5e-38 163.7 171 58.5
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 7.3e-38 161.4 187 52.4
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 7.3e-38 161.4 161 55.9
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.8e-36 156.8 146 57.5
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.4e-33 147.1 192 47.9
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 3.5e-32 142.5 96 77.1
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 1.5e-30 137.1 114 61.4
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 9.5e-30 134.4 136 56.6
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 4.7e-29 132.1 110 60.0
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 6.2e-29 131.7 100 64.0
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.1e-28 131.0 138 51.4
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 1.1e-28 131.0 87 79.3
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.6e-27 126.3 123 56.9
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 1.7e-26 123.6 104 64.4
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 2.1e-24 116.7 75 80.0
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 3.5e-24 115.9 148 48.6
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 7.8e-24 114.8 66 86.4
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.5e-22 110.5 91 64.8
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 2.1e-21 106.7 103 50.5
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 3.6e-21 105.9 84 59.5
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 2.4e-17 93.2 69 62.3
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 4.2e-17 92.4 63 65.1
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 6.6e-15 85.1 120 50.0
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.5e-11 72.4 51 70.6
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 8.7e-07 58.2 58 44.8
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 9.6e-06 54.7 40 65.0


User provided reference genes

Program Settings