Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010257.1 Olea europaea HOM05D002468 ORTHO05D005371 5.2e-246 854.0 442 100.0
Peaxi162Scf00842g00319 Petunia axillaris HOM05D002468 ORTHO05D005371 1.8e-206 722.6 442 83.3
MSTRG.449 Avicennia marina HOM05D002468 ORTHO05D005371 3.1e-206 721.8 444 85.1
Manes.08G100600 Manihot esculenta HOM05D002468 ORTHO05D005371 5.3e-206 721.1 444 84.5
Ciclev10004979m.g Citrus clementina HOM05D002468 ORTHO05D005371 1.2e-205 719.9 442 82.8
MSTRG.8058 Avicennia marina HOM05D002468 ORTHO05D005371 1.3e-204 716.5 444 84.5
Manes.09G188600 Manihot esculenta HOM05D002468 ORTHO05D005371 2.2e-204 715.7 445 83.1
MD16G1141700 Malus domestica HOM05D002468 ORTHO05D005371 1.4e-203 713.0 443 84.0
CSS0030444 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 2.7e-202 708.8 442 82.8
Solyc11g033288.1 Solanum lycopersicum HOM05D002468 ORTHO05D005371 2.7e-202 708.8 442 83.5
Cpa.g.sc38.67 Carica papaya HOM05D002468 ORTHO05D005371 3.5e-202 708.4 445 82.2
Sopen11g017140 Solanum pennellii HOM05D002468 ORTHO05D005371 3.5e-202 708.4 442 83.5
PGSC0003DMG402028027 Solanum tuberosum HOM05D002468 ORTHO05D005371 3.5e-202 708.4 443 84.0
Thecc.02G191400 Theobroma cacao HOM05D002468 ORTHO05D005371 6.0e-202 707.6 443 82.8
CSS0032961 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 1.0e-201 706.8 442 82.6
Prupe.1G214200 Prunus persica HOM05D002468 ORTHO05D005371 1.0e-201 706.8 442 82.6
CAN.G624.1 Capsicum annuum HOM05D002468 ORTHO05D005371 3.0e-201 705.3 443 83.3
Dinv17539 Davidia involucrata HOM05D002468 ORTHO05D005371 5.1e-201 704.5 442 83.0
Potri.001G068200 Populus trichocarpa HOM05D002468 ORTHO05D005371 5.1e-201 704.5 441 83.0
SalBow2G0960 Salvia bowleyana HOM05D002468 ORTHO05D005371 5.1e-201 704.5 443 83.5
Sabra03G0117600 Salix brachista HOM05D002468 ORTHO05D005371 6.6e-201 704.1 443 83.1
MD13G1131400 Malus domestica HOM05D002468 ORTHO05D005371 1.1e-200 703.4 444 83.3
GSVIVG01001098001 Vitis vinifera HOM05D002468 ORTHO05D005371 1.9e-200 702.6 443 82.4
Atru.chr12.1428 Acer truncatum HOM05D002468 ORTHO05D005371 4.3e-200 701.4 443 80.4
Duzib132G1053 Durio zibethinus HOM05D002468 ORTHO05D005371 5.6e-200 701.0 443 82.2
Gohir.D04G140900 Gossypium hirsutum HOM05D002468 ORTHO05D005371 5.6e-200 701.0 440 82.5
Gohir.A04G101700 Gossypium hirsutum HOM05D002468 ORTHO05D005371 7.3e-200 700.7 440 82.7
Cc11_g14960 Coffea canephora HOM05D002468 ORTHO05D005371 9.6e-200 700.3 447 83.7
arahy.Tifrunner.gnm1.ann1.PCZ0HW Arachis hypogaea HOM05D002468 ORTHO05D005371 1.6e-199 699.5 442 81.9
arahy.Tifrunner.gnm1.ann1.S6Z2J3 Arachis hypogaea HOM05D002468 ORTHO05D005371 1.6e-199 699.5 442 81.9
Gorai.012G125900 Gossypium raimondii HOM05D002468 ORTHO05D005371 2.1e-199 699.1 440 82.3
FvH4_4g22560 Fragaria vesca HOM05D002468 ORTHO05D005371 3.6e-199 698.4 444 81.1
CANSAT01G0579 Cannabis sativa HOM05D002468 ORTHO05D005371 4.8e-199 698.0 442 81.4
FAN07G2580 Fragaria x ananassa HOM05D002468 ORTHO05D005371 6.2e-199 697.6 444 80.6
PGR119G1329 Punica granatum HOM05D002468 ORTHO05D005371 6.2e-199 697.6 446 81.2
Dinv03336 Davidia involucrata HOM05D002468 ORTHO05D005371 1.4e-198 696.4 442 81.2
TWI36G1422 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 1.8e-198 696.0 445 81.3
Duzib052G0101 Durio zibethinus HOM05D002468 ORTHO05D005371 2.4e-198 695.7 443 81.0
Eucgr.G01978 Eucalyptus grandis HOM05D002468 ORTHO05D005371 2.4e-198 695.7 445 81.1
TWI18G0725 Tripterygium wilfordii HOM05D002468 ORTHO05D005371 2.4e-198 695.7 449 81.5
ClCG07G011940 Citrullus lanatus HOM05D002468 ORTHO05D005371 4.0e-198 694.9 440 80.9
THA.LOC104807252 Tarenaya hassleriana HOM05D002468 ORTHO05D005371 6.9e-198 694.1 440 80.5
Rhsim12G0017100 Rhododendron simsii HOM05D002468 ORTHO05D005371 1.2e-197 693.3 404 87.6
RcHm_v2.0_Chr4g0428801 Rosa chinensis HOM05D002468 ORTHO05D005371 2.0e-197 692.6 444 80.4
HanXRQChr17g0540381 Helianthus annuus HOM05D002468 ORTHO05D005371 2.6e-197 692.2 401 86.8
CiPaw.06G109900 Carya illinoinensis HOM05D002468 ORTHO05D005371 3.4e-197 691.8 442 81.7
TAR629G1443 Trochodendron aralioides HOM05D002468 ORTHO05D005371 9.9e-197 690.3 442 80.8
TAR371G0123 Trochodendron aralioides HOM05D002468 ORTHO05D005371 1.3e-196 689.9 430 82.6
Lj1g0025256 Lotus japonicus HOM05D002468 ORTHO05D005371 2.2e-196 689.1 442 81.0
FAN17G0051 Fragaria x ananassa HOM05D002468 ORTHO05D005371 2.9e-196 688.7 442 79.9
Glyma.08G362900 Glycine max HOM05D002468 ORTHO05D005371 2.9e-196 688.7 442 81.7
Actinidia30583 Actinidia chinensis HOM05D002468 ORTHO05D005371 1.1e-195 686.8 442 81.0
FAN12G2192 Fragaria x ananassa HOM05D002468 ORTHO05D005371 1.1e-195 686.8 439 80.4
TPR.G9718 Trifolium pratense HOM05D002468 ORTHO05D005371 1.1e-195 686.8 435 82.1
vmacro01017 Vaccinium macrocarpon HOM05D002468 ORTHO05D005371 1.1e-195 686.8 439 80.9
CsaV3_4G002210 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.4e-195 686.4 443 79.9
Phvul.008G003600 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.4e-195 686.4 420 84.0
ECA246G0169 Erigeron canadensis HOM05D002468 ORTHO05D005371 2.4e-195 685.6 443 81.0
CiPaw.05G100700 Carya illinoinensis HOM05D002468 ORTHO05D005371 4.2e-195 684.9 442 80.1
Medtr7g006560 Medicago truncatula HOM05D002468 ORTHO05D005371 5.4e-195 684.5 438 80.8
QL03p049039 Quercus lobata HOM05D002468 ORTHO05D005371 9.3e-195 683.7 441 79.4
Aqoxy5G03074 Aquilegia oxysepala HOM05D002468 ORTHO05D005371 1.2e-194 683.3 440 80.0
Cfa009455 Carpinus fangiana HOM05D002468 ORTHO05D005371 1.2e-194 683.3 443 79.9
Lsat_1_v5_gn_3_32661 Lactuca sativa HOM05D002468 ORTHO05D005371 1.2e-194 683.3 398 86.9
MELO3C017817.2 Cucumis melo HOM05D002468 ORTHO05D005371 1.6e-194 682.9 440 79.8
Ca_04094_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 2.1e-194 682.6 422 83.6
Migut.K01049 Erythranthe guttata HOM05D002468 ORTHO05D005371 2.1e-194 682.6 444 81.8
Sed0000476 Sechium edule HOM05D002468 ORTHO05D005371 3.5e-194 681.8 440 79.3
Glyma.18G299100 Glycine max HOM05D002468 ORTHO05D005371 4.6e-194 681.4 442 80.8
VMungo1383G1406 Vigna mungo HOM05D002468 ORTHO05D005371 4.6e-194 681.4 442 80.1
Hund14581 Selenicereus undatus HOM05D002468 ORTHO05D005371 3.0e-193 678.7 441 78.5
Sc11g0000080 Simmondsia chinensis HOM05D002468 ORTHO05D005371 1.1e-192 676.8 440 79.1
HanXRQChr06g0175161 Helianthus annuus HOM05D002468 ORTHO05D005371 2.5e-192 675.6 399 86.0
DCAR_024636 Daucus carota HOM05D002468 ORTHO05D005371 4.3e-192 674.9 443 81.0
Thhalv10013572m.g Eutrema salsugineum HOM05D002468 ORTHO05D005371 1.6e-191 672.9 422 81.3
SGA_v2.0_scaffold258G45768 Striga asiatica HOM05D002468 ORTHO05D005371 1.6e-191 672.9 448 80.6
BraA10t44546Z Brassica rapa HOM05D002468 ORTHO05D005371 2.1e-191 672.5 440 79.3
Carub.0006s1158 Capsella rubella HOM05D002468 ORTHO05D005371 4.8e-191 671.4 440 78.6
A10p24820 Brassica napus HOM05D002468 ORTHO05D005371 6.2e-191 671.0 428 81.3
Psat3g207000 Pisum sativum HOM05D002468 ORTHO05D005371 8.1e-191 670.6 435 81.4
EL10Ac6g13612 Beta vulgaris HOM05D002468 ORTHO05D005371 1.1e-190 670.2 440 78.2
Sed0003563 Sechium edule HOM05D002468 ORTHO05D005371 1.1e-190 670.2 442 79.0
C09p63670 Brassica napus HOM05D002468 ORTHO05D005371 2.4e-190 669.1 440 78.6
BolC9t59208H Brassica oleracea HOM05D002468 ORTHO05D005371 2.4e-190 669.1 440 78.6
Ah.03g135540 Amaranthus hybridus HOM05D002468 ORTHO05D005371 3.1e-190 668.7 443 76.3
CARHR200010 Cardamine hirsuta HOM05D002468 ORTHO05D005371 2.0e-189 666.0 401 83.0
AUR62028839 Chenopodium quinoa HOM05D002468 ORTHO05D005371 2.6e-189 665.6 398 82.9
unitig_8.g2893 Utricularia gibba HOM05D002468 ORTHO05D005371 4.5e-189 664.8 398 85.2
AUR62005716 Chenopodium quinoa HOM05D002468 ORTHO05D005371 5.8e-189 664.5 398 82.7
Sp6g30600 Schrenkiella parvula HOM05D002468 ORTHO05D005371 7.6e-189 664.1 412 82.3
AT5G13420 Arabidopsis thaliana HOM05D002468 ORTHO05D005371 2.9e-188 662.1 440 77.7
BcaC04g19118 Brassica carinata HOM05D002468 ORTHO05D005371 2.9e-188 662.1 413 81.8
Lalb_Chr04g0257301 Lupinus albus HOM05D002468 ORTHO05D005371 2.9e-188 662.1 444 78.8
C02p06130 Brassica napus HOM05D002468 ORTHO05D005371 4.9e-188 661.4 441 78.7
BolC2t06554H Brassica oleracea HOM05D002468 ORTHO05D005371 4.9e-188 661.4 441 78.7
C03p07000 Brassica napus HOM05D002468 ORTHO05D005371 6.4e-188 661.0 441 78.9
BolC3t13199H Brassica oleracea HOM05D002468 ORTHO05D005371 6.4e-188 661.0 441 78.9
AL6G24040 Arabidopsis lyrata HOM05D002468 ORTHO05D005371 1.1e-187 660.2 440 77.0
PSO017G4233 Papaver somniferum HOM05D002468 ORTHO05D005371 1.1e-187 660.2 439 77.9
BraA03t09933Z Brassica rapa HOM05D002468 ORTHO05D005371 3.2e-187 658.7 441 78.2
PSO478G3355 Papaver somniferum HOM05D002468 ORTHO05D005371 4.2e-187 658.3 439 77.4
A03p05960 Brassica napus HOM05D002468 ORTHO05D005371 9.3e-187 657.1 441 77.8
A02p01910 Brassica napus HOM05D002468 ORTHO05D005371 1.2e-186 656.8 396 83.3
BraA02t05164Z Brassica rapa HOM05D002468 ORTHO05D005371 1.2e-186 656.8 396 83.3
MBI07_g35982_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 2.7e-186 655.6 442 76.9
Haze_12509 Corylus avellana HOM05D002468 ORTHO05D005371 1.9e-184 649.4 415 79.8
Nitab4.5_0004349g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 2.1e-183 646.0 441 77.1
Os01g0926300 Oryza sativa ssp. japonica HOM05D002468 ORTHO05D005371 1.2e-181 640.2 414 78.7
HanXRQChr06g0175171 Helianthus annuus HOM05D002468 ORTHO05D005371 2.6e-181 639.0 383 83.8
Aa31LG3G14290 Aethionema arabicum HOM05D002468 ORTHO05D005371 1.7e-180 636.3 486 68.5
CDE05G3080 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 1.9e-179 632.9 398 79.1
HPP92_009801 Vanilla planifolia HOM05D002468 ORTHO05D005371 2.5e-179 632.5 421 77.7
MBI07_g48060_MAGBIO Magnolia biondii HOM05D002468 ORTHO05D005371 7.1e-179 630.9 484 69.8
Zm00001eb363880 Zea mays HOM05D002468 ORTHO05D005371 1.0e-177 627.1 382 81.4
CDE05G2158 Ceratophyllum demersum HOM05D002468 ORTHO05D005371 1.3e-177 626.7 437 73.0
ATR0582G307 Amborella trichopoda HOM05D002468 ORTHO05D005371 1.8e-177 626.3 381 82.9
CSS0032033 Camellia sinensis var. sinensis HOM05D002468 ORTHO05D005371 3.0e-177 625.5 388 82.7
Zm00001eb142730 Zea mays HOM05D002468 ORTHO05D005371 1.9e-176 622.9 383 80.9
Nitab4.5_0002569g0040 Nicotiana tabacum HOM05D002468 ORTHO05D005371 4.5e-173 611.7 446 74.0
BcaB01g05361 Brassica carinata HOM05D002468 ORTHO05D005371 5.9e-173 611.3 441 75.1
Actinidia22113 Actinidia chinensis HOM05D002468 ORTHO05D005371 5.1e-169 598.2 345 87.2
Potri.003G161900 Populus trichocarpa HOM05D002468 ORTHO05D005371 1.2e-162 577.0 368 81.8
BcaNung01156 Brassica carinata HOM05D002468 ORTHO05D005371 1.1e-158 563.9 347 83.0
Lalb_Chr10g0091121 Lupinus albus HOM05D002468 ORTHO05D005371 2.2e-151 539.7 362 78.5
AagrBONN_evm.TU.Sc2ySwM_228.2334 Anthoceros agrestis HOM05D002468 ORTHO05D005371 1.8e-150 536.6 376 71.5
Lj4g0027400 Lotus japonicus HOM05D002468 ORTHO05D005371 9.1e-150 534.3 410 65.6
Lalb_Chr13g0296941 Lupinus albus HOM05D002468 ORTHO05D005371 7.7e-149 531.2 404 64.4
Lj6C840T10 Lonicera japonica HOM05D002468 ORTHO05D005371 3.8e-148 528.9 307 87.9
Glyma.05G199800 Glycine max HOM05D002468 ORTHO05D005371 6.3e-143 511.5 365 67.7
Medtr8g096130 Medicago truncatula HOM05D002468 ORTHO05D005371 8.3e-143 511.1 399 63.7
Mapoly0092s0071 Marchantia polymorpha HOM05D002468 ORTHO05D005371 3.5e-141 505.8 377 66.6
Mapoly0092s0072 Marchantia polymorpha HOM05D002468 ORTHO05D005371 3.8e-140 502.3 377 66.3
Ca_16823_v3 Cicer arietinum L. HOM05D002468 ORTHO05D005371 5.0e-140 501.9 387 63.8
Mapoly0092s0073 Marchantia polymorpha HOM05D002468 ORTHO05D005371 5.0e-140 501.9 377 66.3
TPR.G12900 Trifolium pratense HOM05D002468 ORTHO05D005371 4.2e-139 498.8 389 65.6
Phvul.002G281000 Phaseolus vulgaris HOM05D002468 ORTHO05D005371 1.6e-138 496.9 366 66.1
SMO367G1271 Selaginella moellendorffii HOM05D002468 ORTHO05D005371 6.1e-138 495.0 361 69.8
VMungo0251G2964 Vigna mungo HOM05D002468 ORTHO05D001247 5.2e-137 491.9 366 64.2
Pp3c26_4790 Physcomitrium patens HOM05D002468 ORTHO05D005371 2.0e-136 490.0 364 67.0
ClCG06G013000 Citrullus lanatus HOM05D002468 ORTHO05D005371 2.7e-133 479.6 396 59.6
MELO3C017506.2 Cucumis melo HOM05D002468 ORTHO05D005371 4.7e-130 468.8 374 62.0
SHI04110 Sapria himalayana HOM05D002468 ORTHO05D005371 1.2e-128 464.2 317 75.7
Cpa.g.sc2215.1 Carica papaya HOM05D002468 ORTHO05D005371 3.4e-128 462.6 360 62.5
CBR_g51451 Chara braunii HOM05D002468 ORTHO05D005371 7.3e-115 418.3 365 60.0
arahy.Tifrunner.gnm1.ann1.93S04R Arachis hypogaea HOM05D002468 ORTHO05D005371 6.8e-97 358.6 366 54.1
Eucgr.H00650 Eucalyptus grandis HOM05D002468 ORTHO05D005371 7.3e-91 338.6 302 59.3
Lj2g0022028 Lotus japonicus HOM05D002468 ORTHO05D005371 1.4e-81 307.8 225 68.9
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 1.9e-70 270.8 186 78.0
Mapoly0189s0003 Marchantia polymorpha HOM05D002468 ORTHO05D005371 8.7e-68 261.9 328 44.2
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 2.7e-61 240.4 139 87.1
HanXRQChr10g0304361 Helianthus annuus HOM05D002468 ORTHO05D005371 1.3e-60 238.0 123 91.1
arahy.Tifrunner.gnm1.ann1.1XR5VC Arachis hypogaea HOM05D002468 ORTHO05D005371 1.1e-57 228.4 199 59.8
Glyma.15G205533 Glycine max HOM05D002468 ORTHO05D005371 2.9e-55 220.3 154 69.5
CsaV3_1G031170 Cucumis sativus L. HOM05D002468 ORTHO05D005371 3.2e-38 163.7 162 53.7
Glyma.08G007300 Glycine max HOM05D002468 ORTHO05D005371 4.7e-37 159.8 119 68.9
BcaB01g05316 Brassica carinata HOM05D000877 ORTHO05D012137 1.8e-36 157.9 111 74.8
BolC3t13237H Brassica oleracea HOM05D000877 ORTHO05D012137 1.4e-33 148.3 81 87.7
Lalb_Chr10g0091111 Lupinus albus HOM05D002468 ORTHO05D005371 1.5e-30 138.3 82 84.1
SGA_v2.0_scaffold4G02418 Striga asiatica HOM05D002468 ORTHO05D051394 5.5e-30 136.3 98 65.3
CsaV3_1G031160 Cucumis sativus L. HOM05D002468 ORTHO05D005371 1.7e-26 124.8 80 70.0
SEGI_31132 Sequoiadendron giganteum HOM05D002468 ORTHO05D005371 3.0e-20 104.0 133 46.6
SGA_v2.0_scaffold528G52739 Striga asiatica HOM05D002468 ORTHO05D051394 2.6e-19 100.9 51 88.2
Pp3c3_15390 Physcomitrium patens HOM05D002468 ORTHO05D005371 2.5e-14 84.3 94 47.9
vmacro08874 Vaccinium macrocarpon HOM05D002468 ORTHO05D013153 2.7e-08 64.3 35 85.7


User provided reference genes

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