Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010220.1 Olea europaea HOM05D006569 ORTHO05D007515 0.0e+00 1861.3 1256 100.0
SGA_v2.0_scaffold236G43766 Striga asiatica HOM05D006569 ORTHO05D007515 1.3e-246 857.4 1222 50.0
Migut.K01310 Erythranthe guttata HOM05D006569 ORTHO05D007515 3.8e-241 839.3 1212 44.8
Dinv33774 Davidia involucrata HOM05D006569 ORTHO05D007515 1.1e-232 811.2 1044 58.0
TAR371G0591 Trochodendron aralioides HOM05D006569 ORTHO05D007515 1.6e-228 797.3 1204 51.2
CSS0028247 Camellia sinensis var. sinensis HOM05D006569 ORTHO05D007515 1.1e-227 794.7 1032 50.2
SalBow6G2371 Salvia bowleyana HOM05D006569 ORTHO05D007515 5.5e-224 782.3 988 50.3
MSTRG.15471 Avicennia marina HOM05D006569 ORTHO05D007515 3.7e-220 769.6 1050 55.4
FAN05G0252 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.1e-219 768.1 1204 43.2
Rhsim10G0036300 Rhododendron simsii HOM05D006569 ORTHO05D007515 4.5e-218 762.7 1045 46.9
MD09G1053400 Malus domestica HOM05D006569 ORTHO05D007515 8.4e-217 758.4 1251 48.8
FAN14G1478 Fragaria x ananassa HOM05D006569 ORTHO05D007515 4.6e-215 752.7 1211 52.0
CANSAT64G0455 Cannabis sativa HOM05D006569 ORTHO05D007515 1.8e-214 750.7 1230 47.0
GSVIVG01011442001 Vitis vinifera HOM05D006569 ORTHO05D007515 3.7e-212 743.0 1045 56.2
Cc07_g03540 Coffea canephora HOM05D006569 ORTHO05D007515 5.9e-210 735.7 1052 52.9
CiPaw.04G004700 Carya illinoinensis HOM05D006569 ORTHO05D007515 1.1e-208 731.5 1253 56.2
Prupe.3G265200 Prunus persica HOM05D006569 ORTHO05D007515 1.9e-208 730.7 1260 53.7
FAN02G1154 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.1e-207 727.2 1216 55.4
Ciclev10013587m.g Citrus clementina HOM05D006569 ORTHO05D007515 1.9e-205 720.7 1221 50.2
Potri.017G086000 Populus trichocarpa HOM05D006569 ORTHO05D007515 1.7e-196 691.0 1265 44.1
QL02p053824 Quercus lobata HOM05D006569 ORTHO05D007515 1.1e-195 688.3 1203 53.0
Sabra17G0075800 Salix brachista HOM05D006569 ORTHO05D007515 1.5e-194 684.5 1015 42.5
Nitab4.5_0003653g0010 Nicotiana tabacum HOM05D006569 ORTHO05D007515 7.2e-192 675.6 761 46.6
Solyc02g067200.4 Solanum lycopersicum HOM05D006569 ORTHO05D007515 8.8e-190 668.7 800 43.8
Lju41C9T14 Lonicera japonica HOM05D006569 ORTHO05D007515 1.5e-189 667.9 753 52.9
FAN09G2200 Fragaria x ananassa HOM05D006569 ORTHO05D007515 4.4e-189 666.4 1177 42.9
Nitab4.5_0000212g0030 Nicotiana tabacum HOM05D006569 ORTHO05D007515 2.2e-188 664.1 798 46.5
PGSC0003DMG400025133 Solanum tuberosum HOM05D006569 ORTHO05D007515 1.8e-187 661.0 791 43.9
Sopen02g016380 Solanum pennellii HOM05D006569 ORTHO05D007515 4.1e-187 659.8 794 43.5
Peaxi162Scf00011g00263 Petunia axillaris HOM05D006569 ORTHO05D007515 2.9e-185 653.7 967 49.5
Cpa.g.sc14.98 Carica papaya HOM05D006569 ORTHO05D007515 1.2e-183 648.3 999 50.8
AUR62018101 Chenopodium quinoa HOM05D006569 ORTHO05D007515 4.7e-183 646.4 1212 50.6
Atru.chr8.291 Acer truncatum HOM05D006569 ORTHO05D007515 7.5e-181 639.0 971 44.7
CAN.G1103.13 Capsicum annuum HOM05D006569 ORTHO05D007515 7.5e-181 639.0 715 50.9
Lsat_1_v5_gn_2_89461 Lactuca sativa HOM05D006569 ORTHO05D007515 4.1e-179 633.3 1246 42.5
Sc10g0003480 Simmondsia chinensis HOM05D006569 ORTHO05D007515 5.3e-179 632.9 997 48.6
Manes.01G092900 Manihot esculenta HOM05D006569 ORTHO05D007515 8.5e-177 625.5 1048 42.8
TWI60G0939 Tripterygium wilfordii HOM05D006569 ORTHO05D007515 6.1e-175 619.4 1046 41.1
FvH4_6g48150 Fragaria vesca HOM05D006569 ORTHO05D007515 8.0e-175 619.0 1083 48.9
Eucgr.I01955 Eucalyptus grandis HOM05D006569 ORTHO05D007515 5.7e-173 612.8 1004 42.0
CsaV3_7G024320 Cucumis sativus L. HOM05D006569 ORTHO05D007515 1.3e-172 611.7 1198 43.7
DCAR_021661 Daucus carota HOM05D006569 ORTHO05D007515 4.8e-172 609.8 797 48.4
EL10Ac2g03001 Beta vulgaris HOM05D006569 ORTHO05D007515 3.5e-170 603.6 1191 42.2
HanXRQChr07g0199321 Helianthus annuus HOM05D006569 ORTHO05D007515 1.7e-169 601.3 1407 37.4
arahy.Tifrunner.gnm1.ann1.80L4ZA Arachis hypogaea HOM05D006569 ORTHO05D007515 3.8e-169 600.1 999 39.1
RcHm_v2.0_Chr2g0167491 Rosa chinensis HOM05D006569 ORTHO05D007515 5.5e-168 596.3 1251 43.9
MELO3C023650.2 Cucumis melo HOM05D006569 ORTHO05D007515 2.3e-166 590.9 1198 45.2
Hund15592 Selenicereus undatus HOM05D006569 ORTHO05D007515 1.2e-165 588.6 980 41.9
Cfa007985 Carpinus fangiana HOM05D006569 ORTHO05D007515 5.7e-165 586.3 997 50.9
Lalb_Chr15g0081471 Lupinus albus HOM05D006569 ORTHO05D007515 4.9e-164 583.2 1000 41.3
AUR62034434 Chenopodium quinoa HOM05D006569 ORTHO05D007515 1.4e-163 581.6 1000 48.9
Carub.0006s1347 Capsella rubella HOM05D006569 ORTHO05D007515 1.2e-162 578.6 1171 36.1
Lj6g0009481 Lotus japonicus HOM05D006569 ORTHO05D007515 2.8e-159 567.4 1254 43.0
Haze_14089 Corylus avellana HOM05D006569 ORTHO05D007515 3.6e-159 567.0 1042 48.8
Psat5g175080 Pisum sativum HOM05D006569 ORTHO05D007515 6.8e-158 562.8 1178 43.7
ClCG09G010340 Citrullus lanatus HOM05D006569 ORTHO05D007515 2.0e-157 561.2 993 51.6
TPR.G33795 Trifolium pratense HOM05D006569 ORTHO05D007515 7.5e-157 559.3 1196 44.8
Medtr3g053000 Medicago truncatula HOM05D006569 ORTHO05D007515 1.8e-155 554.7 1165 41.5
Sp6g28790 Schrenkiella parvula HOM05D006569 ORTHO05D007515 7.8e-154 549.3 1251 35.7
AL6G26150 Arabidopsis lyrata HOM05D006569 ORTHO05D007515 2.3e-153 547.7 1174 36.2
AT5G15280 Arabidopsis thaliana HOM05D006569 ORTHO05D007515 2.1e-151 541.2 1207 37.1
Aqoxy3G03442 Aquilegia oxysepala HOM05D006569 ORTHO05D007515 4.7e-151 540.0 789 45.9
Thhalv10012473m.g Eutrema salsugineum HOM05D006569 ORTHO05D007515 1.1e-147 528.9 1165 35.4
THA.LOC104822352 Tarenaya hassleriana HOM05D006569 ORTHO05D007515 1.1e-147 528.9 882 40.2
ECA238G4289 Erigeron canadensis HOM05D006569 ORTHO05D007515 1.4e-147 528.5 1083 41.8
CARHR198030 Cardamine hirsuta HOM05D006569 ORTHO05D007515 2.8e-143 514.2 1175 37.4
BcaNung03317 Brassica carinata HOM05D006569 ORTHO05D007515 8.1e-143 512.7 1202 34.4
Duzib264G1306 Durio zibethinus HOM05D006569 ORTHO05D007515 5.8e-141 506.5 642 51.1
Sed0017024 Sechium edule HOM05D006569 ORTHO05D007515 9.9e-141 505.8 1217 42.3
Glyma.18G093100 Glycine max HOM05D006569 ORTHO05D007515 2.2e-140 504.6 1164 40.5
Ah.10g031720 Amaranthus hybridus HOM05D006569 ORTHO05D007515 2.9e-140 504.2 964 38.9
PGR004G0299 Punica granatum HOM05D006569 ORTHO05D007515 5.4e-139 500.0 989 40.4
BraA02t05270Z Brassica rapa HOM05D006569 ORTHO05D007515 2.3e-137 494.6 1163 31.6
VMungo0540G0528 Vigna mungo HOM05D006569 ORTHO05D007515 1.1e-136 492.3 1165 43.9
Aa31LG11G14260 Aethionema arabicum HOM05D006569 ORTHO05D007515 8.9e-134 482.6 1169 35.3
PSO832G0544 Papaver somniferum HOM05D006569 ORTHO05D007515 3.9e-129 467.2 793 43.8
PSO013G0141 Papaver somniferum HOM05D006569 ORTHO05D007515 5.6e-128 463.4 792 42.9
Ca_14754_v3 Cicer arietinum L. HOM05D006569 ORTHO05D007515 3.6e-127 460.7 1086 40.1
Zm00001eb005280 Zea mays HOM05D006569 ORTHO05D007515 1.3e-124 452.2 1192 30.8
C02p07640 Brassica napus HOM05D006569 ORTHO05D007515 4.9e-116 423.7 1164 29.8
BcaC03g13417 Brassica carinata HOM05D006569 ORTHO05D007515 6.4e-116 423.3 1164 29.8
BolC2t06696H Brassica oleracea HOM05D006569 ORTHO05D007515 1.4e-115 422.2 1164 29.6
MBI05_g41591_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 3.9e-105 387.5 755 38.5
HPP92_012798 Vanilla planifolia HOM05D006569 ORTHO05D007515 8.7e-105 386.3 684 33.5
ATR1145G048 Amborella trichopoda HOM05D006569 ORTHO05D007515 9.6e-104 382.9 1241 48.1
CDE04G0154 Ceratophyllum demersum HOM05D006569 ORTHO05D007515 1.1e-99 369.4 631 31.9
FAN09G3888 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.2e-93 349.4 582 47.1
MBI05_g10764_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 3.0e-81 308.1 754 29.0
A02p02990 Brassica napus HOM05D006569 ORTHO05D007515 9.7e-80 303.1 739 33.8
COL.COLO4_10330 Corchorus olitorius HOM05D006569 ORTHO05D007515 7.0e-78 297.0 773 33.9
FvH4_6g47953 Fragaria vesca HOM05D006569 ORTHO05D007515 1.6e-69 269.2 353 50.7
FAN05G1756 Fragaria x ananassa HOM05D006569 ORTHO05D007515 4.5e-69 267.7 348 55.2
Phvul.006G046500 Phaseolus vulgaris HOM05D006569 ORTHO05D007515 5.9e-69 267.3 777 41.2
RcHm_v2.0_Chr2g0167581 Rosa chinensis HOM05D006569 ORTHO05D007515 1.1e-62 246.5 241 50.6
FAN09G1632 Fragaria x ananassa HOM05D006569 ORTHO05D007515 3.8e-60 238.0 297 45.5
Thecc.04G085700 Theobroma cacao HOM05D006569 ORTHO05D007515 8.0e-50 203.8 209 50.7
Glyma.18G108202 Glycine max HOM05D006569 ORTHO05D007515 2.0e-45 189.1 346 50.9
QL93p0100_0341 Quercus lobata HOM05D006569 ORTHO05D007515 2.0e-45 189.1 527 27.7
QL08p010038 Quercus lobata HOM05D006569 ORTHO05D007515 2.7e-45 188.7 951 25.6
QL02p057930 Quercus lobata HOM05D006569 ORTHO05D007515 1.7e-44 186.0 543 26.9
RcHm_v2.0_Chr2g0167571 Rosa chinensis HOM05D006569 ORTHO05D007515 8.6e-44 183.7 202 43.6
FvH4_6g48880 Fragaria vesca HOM05D006569 ORTHO05D007515 3.3e-43 181.8 181 53.0
HanXRQChr05g0134551 Helianthus annuus HOM05D006569 ORTHO05D007515 8.6e-36 157.1 305 67.9
FAN14G0320 Fragaria x ananassa HOM05D006569 ORTHO05D007515 9.8e-32 143.7 154 50.0
FvH4_6g47954 Fragaria vesca HOM05D006569 ORTHO05D007515 1.3e-31 143.3 154 50.0
MBI05_g36424_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 4.3e-27 128.3 245 33.1
HPP92_012677 Vanilla planifolia HOM05D006569 ORTHO05D007515 4.0e-25 121.7 671 35.0
SEGI_17455 Sequoiadendron giganteum HOM05D006569 ORTHO05D007515 1.1e-22 113.6 528 33.5
FAN05G1232 Fragaria x ananassa HOM05D006569 ORTHO05D007515 2.1e-18 99.4 117 45.3
Os03g0168400 Oryza sativa ssp. japonica HOM05D006569 ORTHO05D007515 8.1e-18 97.4 140 37.9
MBI05_g36420_MAGBIO Magnolia biondii HOM05D006569 ORTHO05D007515 3.1e-17 95.5 102 50.0
Medtr3g052970 Medicago truncatula HOM05D006569 ORTHO05D007515 4.9e-15 88.2 89 48.3
ATR0974G001 Amborella trichopoda HOM05D006569 ORTHO05D007515 1.1e-14 87.0 75 54.7
Thecc.04G085800 Theobroma cacao HOM05D006569 ORTHO05D007515 2.7e-13 82.4 173 36.4
Glyma.08G319450 Glycine max HOM05D006569 ORTHO05D007515 4.0e-09 68.6 88 38.6
FAN09G4849 Fragaria x ananassa HOM05D006569 ORTHO05D007515 1.2e-08 67.0 87 44.8
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 3.4e-08 65.5 249 22.9
Eucgr.E03336 Eucalyptus grandis HOM05D002986 ORTHO05D007611 7.6e-08 64.3 167 25.7
RcHm_v2.0_Chr1g0326571 Rosa chinensis HOM05D006556 ORTHO05D008146 9.9e-08 63.9 277 21.3
RcHm_v2.0_Chr1g0326501 Rosa chinensis HOM05D006556 ORTHO05D008146 1.7e-07 63.2 275 23.3
HanXRQChr16g0524351 Helianthus annuus HOM05D006569 ORTHO05D007515 2.2e-07 62.8 89 32.6
Zm00001eb315460 Zea mays HOM05D003689 ORTHO05D003950 2.2e-07 62.8 281 21.4
Lsat_1_v5_gn_1_46480 Lactuca sativa HOM05D001126 ORTHO05D000991 3.8e-07 62.0 81 44.4
BcaNung04765 Brassica carinata HOM05D007322 ORTHO05D009029 4.9e-07 61.6 242 25.6
Aa31LG9G6870 Aethionema arabicum HOM05D002986 ORTHO05D007611 1.4e-06 60.1 187 24.6
C07p29280 Brassica napus HOM05D002986 ORTHO05D007611 1.9e-06 59.7 191 24.1
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 2.4e-06 59.3 253 21.3
Carub.0008s0183 Capsella rubella HOM05D002986 ORTHO05D007611 3.2e-06 58.9 181 24.3
CAN.G1456.8 Capsicum annuum HOM05D002453 ORTHO05D002107 3.2e-06 58.9 230 23.0
Sp2g10960 Schrenkiella parvula HOM05D002986 ORTHO05D007611 3.2e-06 58.9 181 24.3
AL2G28380 Arabidopsis lyrata HOM05D005706 ORTHO05D007474 4.2e-06 58.5 204 22.1
BraA06t27482Z Brassica rapa HOM05D002986 ORTHO05D007611 4.2e-06 58.5 181 24.3
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 5.4e-06 58.2 249 20.5
Gohir.D05G161532 Gossypium hirsutum HOM05D002986 ORTHO05D007611 5.4e-06 58.2 181 24.3
HPP92_025826 Vanilla planifolia HOM05D006999 ORTHO05D008936 5.4e-06 58.2 188 25.0
BcaC05g24974 Brassica carinata HOM05D007322 ORTHO05D009029 7.1e-06 57.8 243 23.9
A06p46180 Brassica napus HOM05D002986 ORTHO05D007611 7.1e-06 57.8 181 24.3
Cpa.g.sc95.19 Carica papaya HOM05D006842 ORTHO05D008908 7.1e-06 57.8 175 21.1
BolC7t43470H Brassica oleracea HOM05D002986 ORTHO05D007611 9.3e-06 57.4 181 24.3
CARHR175750 Cardamine hirsuta HOM05D002986 ORTHO05D007611 9.3e-06 57.4 181 23.8
Lj4g0007925 Lotus japonicus HOM05D002460 ORTHO05D002716 9.3e-06 57.4 172 26.7


User provided reference genes

Program Settings