Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 1.5e-311 1072.0 560 100.0
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 6.0e-130 468.8 604 49.3
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 6.0e-122 442.2 568 48.4
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 9.5e-112 408.3 601 45.4
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 8.9e-110 401.7 605 44.6
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 4.9e-108 396.0 604 42.4
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 9.2e-107 391.7 557 47.0
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 1.2e-106 391.3 563 46.2
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 9.9e-101 371.7 560 46.1
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 6.4e-100 369.0 559 45.1
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 1.1e-99 368.2 575 43.7
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 1.4e-99 367.9 557 45.6
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 4.2e-99 366.3 579 43.7
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 9.3e-99 365.2 556 44.2
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 9.3e-99 365.2 575 43.5
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 3.5e-98 363.2 606 40.4
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 6.6e-97 359.0 562 44.8
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 3.3e-96 356.7 472 46.8
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 1.3e-95 354.8 568 42.8
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 1.6e-95 354.4 589 41.9
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.6e-95 353.2 573 42.6
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 4.8e-95 352.8 573 42.8
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 6.2e-95 352.4 573 42.1
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 4.0e-94 349.7 573 42.6
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 1.2e-93 348.2 561 40.8
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 9.9e-93 345.1 583 42.7
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 2.9e-92 343.6 556 44.2
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 6.4e-92 342.4 564 42.2
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 1.1e-91 341.7 580 40.2
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 9.3e-91 338.6 581 41.0
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 2.7e-90 337.0 586 42.2
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 6.0e-90 335.9 576 41.1
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 7.9e-90 335.5 432 48.8
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 2.3e-89 334.0 374 48.7
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 3.0e-89 333.6 580 40.5
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 6.7e-89 332.4 531 42.4
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 3.3e-88 330.1 547 42.2
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 4.3e-88 329.7 488 43.4
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 7.4e-88 328.9 594 40.6
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 3.7e-87 326.6 595 40.0
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 1.8e-86 324.3 349 50.1
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 6.9e-86 322.4 576 40.3
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 1.3e-84 318.2 560 40.2
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 3.8e-84 316.6 585 41.7
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 4.9e-84 316.2 580 40.0
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 6.4e-84 315.8 596 40.4
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 8.4e-84 315.5 464 43.1
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 1.9e-83 314.3 573 39.6
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 9.3e-83 312.0 565 38.9
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 4.6e-82 309.7 463 43.4
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 6.0e-82 309.3 548 40.1
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 1.8e-81 307.8 645 36.1
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.9e-80 304.3 465 42.6
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 4.8e-79 299.7 565 39.8
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 8.2e-79 298.9 502 42.4
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 3.1e-78 297.0 558 39.6
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 5.8e-77 292.7 574 38.7
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 1.7e-76 291.2 551 38.5
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 6.5e-76 289.3 555 38.2
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 2.5e-75 287.3 537 39.9
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 3.2e-75 287.0 548 39.1
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 3.2e-75 287.0 398 43.5
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 4.2e-75 286.6 503 39.6
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 1.5e-72 278.1 436 42.4
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.5e-72 278.1 436 42.2
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 9.7e-72 275.4 353 47.9
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 1.6e-71 274.6 385 44.2
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 3.7e-71 273.5 289 49.8
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 6.3e-71 272.7 385 43.9
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 8.2e-71 272.3 564 38.1
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 1.8e-70 271.2 606 36.1
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 5.3e-70 269.6 539 37.1
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 5.3e-70 269.6 564 35.5
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 2.0e-69 267.7 317 50.5
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 2.2e-68 264.2 561 34.9
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 8.5e-68 262.3 563 35.3
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 1.4e-67 261.5 568 35.4
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 1.6e-66 258.1 348 43.4
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 2.7e-66 257.3 593 36.1
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.3e-65 254.2 577 37.4
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 3.9e-65 253.4 577 38.0
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 1.8e-62 244.6 562 36.3
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 6.9e-62 242.7 747 32.0
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 2.6e-61 240.7 564 34.8
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 2.6e-61 240.7 564 34.8
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 6.1e-58 229.6 656 34.1
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 7.7e-53 212.6 567 33.5
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.3e-52 211.8 467 38.3
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 1.7e-52 211.5 376 37.0
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.1e-48 198.7 534 34.6
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 5.7e-48 196.4 303 40.6
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 1.3e-47 195.3 276 42.8
GSVIVG01026370001 Vitis vinifera HOM05D006063 ORTHO05D000023 9.1e-46 189.1 331 45.0
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 3.5e-45 187.2 301 41.5
COL.COLO4_20542 Corchorus olitorius HOM05D006063 ORTHO05D000023 2.7e-42 177.6 384 38.0
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.8e-41 174.9 427 31.9
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 2.0e-40 171.4 444 31.3
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 5.7e-40 169.9 451 31.3
FvH4_5g38930 Fragaria vesca HOM05D006063 ORTHO05D000023 1.1e-38 165.6 321 40.8
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 1.4e-38 165.2 226 41.6
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 3.1e-38 164.1 397 34.3
Atru.chr2.1231 Acer truncatum HOM05D006063 ORTHO05D000023 1.8e-33 148.3 138 63.0
HPP92_006233 Vanilla planifolia HOM05D006063 ORTHO05D000023 1.2e-32 145.6 338 38.2
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 4.4e-32 143.7 583 27.4
CDE05G3203 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 4.8e-31 140.2 346 36.7
A05p43200 Brassica napus HOM05D000005 ORTHO05D000449 3.3e-27 127.5 174 46.0
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 6.8e-25 119.8 272 32.4
DCAR_005531 Daucus carota HOM05D006063 ORTHO05D000023 5.7e-24 116.7 245 30.6
CsaV3_1G044530 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.3e-23 115.5 117 58.1
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 5.9e-21 106.7 116 41.4
SEGI_40887 Sequoiadendron giganteum HOM05D006063 ORTHO05D000023 1.3e-20 105.5 263 35.7
BraA05t23062Z Brassica rapa HOM05D006063 ORTHO05D000023 2.9e-20 104.4 82 64.6
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 2.6e-16 91.3 313 29.1
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 4.9e-15 87.0 92 44.6
BcaC05g30213 Brassica carinata HOM05D006063 ORTHO05D000023 8.9e-09 66.2 49 69.4
Dinv03778 Davidia involucrata HOM05D006063 ORTHO05D045100 2.6e-08 64.7 254 29.1
MBI18_g46978_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 7.5e-08 63.2 59 45.8
FAN08G2149 Fragaria x ananassa HOM05D006063 ORTHO05D000023 9.8e-08 62.8 191 30.9
Dinv03782 Davidia involucrata HOM05D006063 ORTHO05D045148 2.2e-07 61.6 40 75.0


User provided reference genes

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