Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010166.1 Olea europaea HOM05D003590 ORTHO05D004290 9.1e-85 317.0 176 100.0
MSTRG.8205 Avicennia marina HOM05D003590 ORTHO05D004290 3.6e-81 305.1 174 95.4
CDE08G0825 Ceratophyllum demersum HOM05D003590 ORTHO05D004290 1.0e-80 303.5 174 94.8
Dinv15385 Davidia involucrata HOM05D003590 ORTHO05D004290 1.4e-80 303.1 174 94.3
PGSC0003DMG400016231 Solanum tuberosum HOM05D003590 ORTHO05D004290 1.8e-80 302.8 174 94.3
CAN.G1177.3 Capsicum annuum HOM05D003590 ORTHO05D004290 3.0e-80 302.0 174 93.7
Solyc11g008990.2 Solanum lycopersicum HOM05D003590 ORTHO05D004290 8.8e-80 300.4 174 93.1
Sopen11g004770 Solanum pennellii HOM05D003590 ORTHO05D004290 8.8e-80 300.4 174 93.1
Migut.F01864 Erythranthe guttata HOM05D003590 ORTHO05D004290 1.2e-79 300.1 174 93.7
CSS0008581 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 3.3e-79 298.5 176 92.0
Oeu064494.2 Olea europaea HOM05D003590 ORTHO05D004290 5.7e-79 297.7 174 92.5
Cc09_g03870 Coffea canephora HOM05D003590 ORTHO05D004290 9.7e-79 297.0 174 93.1
CSS0039108 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 2.2e-78 295.8 174 92.0
Nitab4.5_0004390g0060 Nicotiana tabacum HOM05D003590 ORTHO05D004290 2.2e-78 295.8 174 92.0
Peaxi162Scf00074g01833 Petunia axillaris HOM05D003590 ORTHO05D004290 2.8e-78 295.4 174 92.0
GSVIVG01019065001 Vitis vinifera HOM05D003590 ORTHO05D004290 2.8e-78 295.4 174 91.4
Nn7g37627 Nelumbo nucifera HOM05D003590 ORTHO05D004290 4.8e-78 294.7 174 92.5
Dinv29086 Davidia involucrata HOM05D003590 ORTHO05D004290 1.1e-77 293.5 174 93.1
SalBow6G6444 Salvia bowleyana HOM05D003590 ORTHO05D004290 1.1e-77 293.5 174 91.4
TAR362G0082 Trochodendron aralioides HOM05D003590 ORTHO05D004290 1.4e-77 293.1 174 91.4
QL10p052769 Quercus lobata HOM05D003590 ORTHO05D004290 3.1e-77 292.0 174 90.8
Atru.chr4.1363 Acer truncatum HOM05D003590 ORTHO05D004290 5.3e-77 291.2 173 90.8
CSS0013807 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 5.3e-77 291.2 176 90.3
CiPaw.01G172800 Carya illinoinensis HOM05D003590 ORTHO05D004290 7.0e-77 290.8 174 90.2
Dinv33190 Davidia involucrata HOM05D003590 ORTHO05D004290 7.0e-77 290.8 174 92.5
TWI36G1101 Tripterygium wilfordii HOM05D003590 ORTHO05D004290 7.0e-77 290.8 174 89.7
PSO339G4307 Papaver somniferum HOM05D003590 ORTHO05D004290 9.1e-77 290.4 174 90.2
ClCG07G015120 Citrullus lanatus HOM05D003590 ORTHO05D004290 1.6e-76 289.7 174 89.7
Lj1A579G41 Lonicera japonica HOM05D003590 ORTHO05D004290 1.6e-76 289.7 174 89.7
CANSAT54G1837 Cannabis sativa HOM05D003590 ORTHO05D004290 2.0e-76 289.3 174 90.8
MBI17_g21475_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 3.5e-76 288.5 174 90.8
Sc06g0005010 Simmondsia chinensis HOM05D003590 ORTHO05D004290 3.5e-76 288.5 174 89.7
PSO384G2196 Papaver somniferum HOM05D003590 ORTHO05D004290 4.5e-76 288.1 174 89.1
Duzib151G0409 Durio zibethinus HOM05D003590 ORTHO05D004290 7.7e-76 287.3 174 87.9
Eucgr.A00018 Eucalyptus grandis HOM05D003590 ORTHO05D004290 7.7e-76 287.3 174 88.5
PGR119G1440 Punica granatum HOM05D003590 ORTHO05D004290 7.7e-76 287.3 174 90.2
CiPaw.02G102900 Carya illinoinensis HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 89.7
Ca_20810_v3 Cicer arietinum L. HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 89.1
MELO3C017774.2 Cucumis melo HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 88.5
Duzib268G1650 Durio zibethinus HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 87.9
HanXRQChr16g0500391 Helianthus annuus HOM05D003590 ORTHO05D004290 1.0e-75 287.0 173 89.6
Lsat_1_v5_gn_8_26121 Lactuca sativa HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 88.5
RcHm_v2.0_Chr6g0285711 Rosa chinensis HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 89.1
SGA_v2.0_scaffold62G21494 Striga asiatica HOM05D004200 ORTHO05D004996 1.0e-75 287.0 174 87.4
Thecc.04G169500 Theobroma cacao HOM05D003590 ORTHO05D004290 1.0e-75 287.0 174 87.9
Cfa015230 Carpinus fangiana HOM05D003590 ORTHO05D004290 1.3e-75 286.6 174 88.5
Haze_01407 Corylus avellana HOM05D003590 ORTHO05D004290 1.3e-75 286.6 174 88.5
Manes.11G128000 Manihot esculenta HOM05D003590 ORTHO05D004290 1.3e-75 286.6 174 88.5
VMungo1383G1305 Vigna mungo HOM05D003590 ORTHO05D004290 1.3e-75 286.6 174 89.7
arahy.Tifrunner.gnm1.ann1.SY3MF3 Arachis hypogaea HOM05D003590 ORTHO05D004290 1.7e-75 286.2 174 89.1
Glyma.11G124800 Glycine max HOM05D003590 ORTHO05D004290 1.7e-75 286.2 174 88.5
Glyma.12G049400 Glycine max HOM05D003590 ORTHO05D004290 1.7e-75 286.2 174 88.5
Lj3A152T20 Lonicera japonica HOM05D003590 ORTHO05D004290 1.7e-75 286.2 174 89.7
Phvul.008G099200 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 1.7e-75 286.2 174 88.5
Psat7g208480 Pisum sativum HOM05D003590 ORTHO05D004290 1.7e-75 286.2 174 88.5
Eucgr.K00001 Eucalyptus grandis HOM05D003590 ORTHO05D004290 2.2e-75 285.8 174 89.1
Prupe.1G203200 Prunus persica HOM05D003590 ORTHO05D004290 2.2e-75 285.8 174 88.5
PGR042G3827 Punica granatum HOM05D003590 ORTHO05D004290 2.2e-75 285.8 174 87.9
Ciclev10021047m.g Citrus clementina HOM05D003590 ORTHO05D004290 2.9e-75 285.4 174 89.1
CsaV3_4G002670 Cucumis sativus L. HOM05D003590 ORTHO05D004290 2.9e-75 285.4 174 87.9
Gohir.A10G141800 Gossypium hirsutum HOM05D003590 ORTHO05D004290 2.9e-75 285.4 174 87.4
Potri.006G123600 Populus trichocarpa HOM05D003590 ORTHO05D004290 2.9e-75 285.4 174 87.9
Sabra06G0097800 Salix brachista HOM05D003590 ORTHO05D004290 2.9e-75 285.4 176 88.6
arahy.Tifrunner.gnm1.ann1.YL8857 Arachis hypogaea HOM05D003590 ORTHO05D004290 3.8e-75 285.0 174 88.5
COL.COLO4_10136 Corchorus olitorius HOM05D003590 ORTHO05D004290 3.8e-75 285.0 174 86.8
Sed0008844 Sechium edule HOM05D003590 ORTHO05D004290 3.8e-75 285.0 174 87.9
Sed0014148 Sechium edule HOM05D003590 ORTHO05D004290 3.8e-75 285.0 174 87.9
Eucgr.B01427 Eucalyptus grandis HOM05D003590 ORTHO05D004290 6.5e-75 284.3 174 88.5
FvH4_2g19990 Fragaria vesca HOM05D003590 ORTHO05D004290 6.5e-75 284.3 174 87.4
Lalb_Chr07g0192831 Lupinus albus HOM05D003590 ORTHO05D004290 6.5e-75 284.3 174 89.1
Gohir.D10G124700 Gossypium hirsutum HOM05D003590 ORTHO05D004290 8.5e-75 283.9 174 86.8
Gorai.011G137800 Gossypium raimondii HOM05D003590 ORTHO05D004290 8.5e-75 283.9 174 86.8
Gohir.A02G091600 Gossypium hirsutum HOM05D003590 ORTHO05D004290 1.1e-74 283.5 174 87.4
Gohir.D02G109000 Gossypium hirsutum HOM05D003590 ORTHO05D004290 1.1e-74 283.5 174 87.4
Gorai.005G124600 Gossypium raimondii HOM05D003590 ORTHO05D004290 1.1e-74 283.5 174 87.4
Lalb_Chr19g0138461 Lupinus albus HOM05D003590 ORTHO05D004290 1.1e-74 283.5 174 88.5
MD17G1177400 Malus domestica HOM05D003590 ORTHO05D004290 1.1e-74 283.5 174 87.4
Ah.06g195400 Amaranthus hybridus HOM05D003590 ORTHO05D004290 1.5e-74 283.1 174 86.8
MD00G1019200 Malus domestica HOM05D003590 ORTHO05D004290 1.5e-74 283.1 174 87.4
HanXRQChr05g0149811 Helianthus annuus HOM05D003590 ORTHO05D004290 1.9e-74 282.7 174 87.9
RcHm_v2.0_Chr2g0122441 Rosa chinensis HOM05D003590 ORTHO05D004290 1.9e-74 282.7 174 87.4
THA.LOC104805702 Tarenaya hassleriana HOM05D003590 ORTHO05D004290 1.9e-74 282.7 174 87.9
Lj3g0023284 Lotus japonicus HOM05D003590 ORTHO05D004290 2.5e-74 282.3 174 87.4
Manes.04G049785 Manihot esculenta HOM05D003590 ORTHO05D004290 2.5e-74 282.3 174 86.8
ATR0743G202 Amborella trichopoda HOM05D003590 ORTHO05D004290 7.2e-74 280.8 174 87.9
CANSAT64G0301 Cannabis sativa HOM05D003590 ORTHO05D004290 7.2e-74 280.8 174 87.4
GSVIVG01038103001 Vitis vinifera HOM05D003590 ORTHO05D004290 1.2e-73 280.0 174 86.8
AUR62006641 Chenopodium quinoa HOM05D003590 ORTHO05D004290 1.6e-73 279.6 175 85.7
Actinidia27105 Actinidia chinensis HOM05D003590 ORTHO05D004290 2.1e-73 279.3 174 87.9
EL10Ac4g10000 Beta vulgaris HOM05D003590 ORTHO05D004290 2.7e-73 278.9 175 84.6
TPR.G34214 Trifolium pratense HOM05D003590 ORTHO05D004290 2.7e-73 278.9 174 87.4
AL2G20260 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 3.6e-73 278.5 174 86.2
Rhsim09G0012200 Rhododendron simsii HOM05D003590 ORTHO05D004290 3.6e-73 278.5 174 86.8
MBI07_g22611_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 6.1e-73 277.7 174 86.8
Potri.016G099400 Populus trichocarpa HOM05D003590 ORTHO05D004290 6.1e-73 277.7 174 85.6
vmacro00650 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 6.1e-73 277.7 174 86.2
vmacro00679 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 6.1e-73 277.7 174 86.2
Carub.0006s2551 Capsella rubella HOM05D003590 ORTHO05D004290 8.0e-73 277.3 174 85.6
AT1G65260 Arabidopsis thaliana HOM05D003590 ORTHO05D004290 1.0e-72 276.9 174 85.6
Medtr4g068210 Medicago truncatula HOM05D003590 ORTHO05D004290 1.0e-72 276.9 174 85.6
Aa31LG2G2380 Aethionema arabicum HOM05D003590 ORTHO05D004290 1.4e-72 276.6 174 85.1
DCAR_023942 Daucus carota HOM05D003590 ORTHO05D004290 1.4e-72 276.6 174 86.8
HPP92_009006 Vanilla planifolia HOM05D003590 ORTHO05D004290 1.8e-72 276.2 174 86.2
CARHR056900 Cardamine hirsuta HOM05D003590 ORTHO05D004290 2.3e-72 275.8 174 85.1
Thhalv10018833m.g Eutrema salsugineum HOM05D003590 ORTHO05D004290 3.0e-72 275.4 174 85.1
Sp5g19930 Schrenkiella parvula HOM05D003590 ORTHO05D004290 3.0e-72 275.4 174 85.1
Os01g0895100 Oryza sativa ssp. japonica HOM05D003590 ORTHO05D004290 4.0e-72 275.0 173 85.0
Zm00001eb144840 Zea mays HOM05D003590 ORTHO05D004290 4.0e-72 275.0 173 85.0
BcaB05g24099 Brassica carinata HOM05D003590 ORTHO05D004290 5.2e-72 274.6 174 85.1
BcaC03g14688 Brassica carinata HOM05D003590 ORTHO05D004290 5.2e-72 274.6 174 85.1
A02p13120 Brassica napus HOM05D003590 ORTHO05D004290 5.2e-72 274.6 174 85.1
C02p21260 Brassica napus HOM05D003590 ORTHO05D004290 5.2e-72 274.6 174 85.1
BraA02t06368Z Brassica rapa HOM05D003590 ORTHO05D004290 5.2e-72 274.6 174 85.1
Actinidia03270 Actinidia chinensis HOM05D003590 ORTHO05D004290 8.8e-72 273.9 174 87.9
Aqoxy2G04149 Aquilegia oxysepala HOM05D003590 ORTHO05D004290 8.8e-72 273.9 174 83.9
BolC2t08266H Brassica oleracea HOM05D003590 ORTHO05D004290 8.8e-72 273.9 174 84.5
Duzib212G0521 Durio zibethinus HOM05D003590 ORTHO05D004290 8.8e-72 273.9 174 83.3
Zm00001eb365760 Zea mays HOM05D003590 ORTHO05D004290 1.2e-71 273.5 173 85.0
FAN27G0950 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.7e-70 269.6 202 75.2
unitig_52.g17513 Utricularia gibba HOM05D003590 ORTHO05D004290 2.2e-70 269.2 174 83.9
DCAR_002151 Daucus carota HOM05D003590 ORTHO05D004290 4.8e-70 268.1 174 85.6
FAN26G3423 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.8e-69 266.2 187 80.2
Phvul.008G052900 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 1.8e-69 266.2 174 82.8
Glyma.18G243700 Glycine max HOM05D003590 ORTHO05D004290 2.4e-69 265.8 174 82.8
Nn1g09673 Nelumbo nucifera HOM05D003590 ORTHO05D004290 2.4e-69 265.8 174 86.8
FAN15G3511 Fragaria x ananassa HOM05D003590 ORTHO05D004290 3.1e-69 265.4 212 71.7
SGA_v2.0_scaffold122G33190 Striga asiatica HOM05D003590 ORTHO05D004290 4.1e-69 265.0 227 68.7
FAN24G1875 Fragaria x ananassa HOM05D003590 ORTHO05D004290 5.4e-69 264.6 214 71.0
Rhsim05G0167200 Rhododendron simsii HOM05D003590 ORTHO05D004290 4.5e-68 261.5 225 69.3
Sabra16G0098800 Salix brachista HOM05D003590 ORTHO05D004290 7.7e-68 260.8 184 78.3
Lj1g0027383 Lotus japonicus HOM05D003590 ORTHO05D004290 2.3e-67 259.2 174 81.0
FvH4_6g53380 Fragaria vesca HOM05D003590 ORTHO05D004290 6.5e-67 257.7 174 79.9
Lsat_1_v5_gn_9_37260 Lactuca sativa HOM05D003590 ORTHO05D004290 6.5e-67 257.7 174 81.0
Pp3c2_28040 Physcomitrium patens HOM05D003590 ORTHO05D004290 1.1e-66 256.9 173 78.0
Nitab4.5_0009796g0040 Nicotiana tabacum HOM05D003590 ORTHO05D004290 4.2e-66 255.0 151 92.7
Mapoly0058s0048 Marchantia polymorpha HOM05D003590 ORTHO05D004290 2.8e-65 252.3 173 76.9
Pp3c7_13570 Physcomitrium patens HOM05D003590 ORTHO05D004290 2.8e-65 252.3 173 76.9
SEGI_22814 Sequoiadendron giganteum HOM05D003590 ORTHO05D004290 4.0e-64 248.4 174 77.6
SMO115G0200 Selaginella moellendorffii HOM05D003590 ORTHO05D004290 7.5e-63 244.2 174 73.6
PSO782G1591 Papaver somniferum HOM05D003590 ORTHO05D004290 3.7e-62 241.9 174 75.9
Hund07359 Selenicereus undatus HOM05D003590 ORTHO05D004290 1.1e-61 240.4 152 84.2
AagrBONN_evm.TU.Sc2ySwM_228.379 Anthoceros agrestis HOM05D003590 ORTHO05D004290 2.4e-61 239.2 174 72.4
CBR_g79424 Chara braunii HOM05D003590 ORTHO05D004290 4.1e-61 238.4 172 72.7
PSO478G1249 Papaver somniferum HOM05D003590 ORTHO05D004290 7.0e-61 237.7 174 75.3
Hund21913 Selenicereus undatus HOM05D003590 ORTHO05D004290 1.0e-59 233.8 167 78.4
Cpa.g.sc9.339 Carica papaya HOM05D003590 ORTHO05D004290 1.3e-59 233.4 174 76.4
ECA246G2345 Erigeron canadensis HOM05D003590 ORTHO05D004290 1.5e-58 229.9 139 89.9
FvH4_3g16870 Fragaria vesca HOM05D003590 ORTHO05D004290 1.2e-57 226.9 174 71.8
RcHm_v2.0_Chr5g0028111 Rosa chinensis HOM05D003590 ORTHO05D004290 2.8e-57 225.7 174 74.1
PRCOL_00001168 Prasinoderma coloniale HOM05D003590 ORTHO05D004290 3.2e-53 212.2 173 64.7
Pp3c10_14840 Physcomitrium patens HOM05D003590 ORTHO05D004290 1.6e-52 209.9 174 63.8
Lsat_1_v5_gn_1_99340 Lactuca sativa HOM05D003590 ORTHO05D004290 1.8e-48 196.4 126 85.7
SHI32795 Sapria himalayana HOM05D003590 ORTHO05D004290 8.9e-48 194.1 187 63.6
AagrBONN_evm.TU.Sc2ySwM_228.2375 Anthoceros agrestis HOM05D003590 ORTHO05D004290 1.0e-43 180.6 175 56.0
vmacro19566 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 1.2e-41 173.7 98 91.8
Hma1.2p1_0831F.1_g225440 Hydrangea macrophylla HOM05D003590 ORTHO05D004290 3.6e-41 172.2 99 91.9
Cre13.g583550 Chlamydomonas reinhardtii HOM05D003590 ORTHO05D004290 4.0e-40 168.7 155 56.8
FAN11G2382 Fragaria x ananassa HOM05D003590 ORTHO05D004290 4.0e-40 168.7 139 68.3
Cpa.g.sc123.34 Carica papaya HOM05D003590 ORTHO05D004290 1.3e-38 163.7 130 70.8
Cre11.g468050 Chlamydomonas reinhardtii HOM05D003590 ORTHO05D004290 2.2e-38 162.9 175 50.3
MD15G1434500 Malus domestica HOM05D003590 ORTHO05D004290 2.3e-35 152.9 93 82.8
FAN19G0667 Fragaria x ananassa HOM05D003590 ORTHO05D004290 3.3e-34 149.1 98 80.6
CBR_g16972 Chara braunii HOM05D003590 ORTHO05D004290 1.2e-33 147.1 176 46.6
ECA246G3922 Erigeron canadensis HOM05D003590 ORTHO05D004290 4.7e-33 145.2 136 64.0
Lj4g0013306 Lotus japonicus HOM05D003590 ORTHO05D004290 2.6e-31 139.4 94 76.6
CBR_g29875 Chara braunii HOM05D003594 ORTHO05D000497 1.1e-29 134.0 99 74.7
Dinv15392 Davidia involucrata HOM05D003590 ORTHO05D004290 6.0e-28 128.3 81 87.7
vmacro19565 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 8.7e-27 124.4 76 89.5
FAN16G0742 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.2e-25 120.6 139 54.7
MCO10G215 Micromonas commoda HOM05D003590 ORTHO05D004290 1.6e-25 120.2 173 44.5
QL11p022255 Quercus lobata HOM05D003590 ORTHO05D004290 5.2e-24 115.2 70 90.0
TWI36G0235 Tripterygium wilfordii HOM05D003590 ORTHO05D004290 1.5e-23 113.6 71 85.9
Actinidia06797 Actinidia chinensis HOM05D003590 ORTHO05D004290 1.3e-17 94.0 76 72.4
Ca_29066_v3 Cicer arietinum L. HOM05D003590 ORTHO05D147848 1.5e-15 87.0 174 29.3
AL2G21120 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 3.4e-15 85.9 50 86.0
AL2G21940 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 5.8e-15 85.1 49 85.7
FAN19G0592 Fragaria x ananassa HOM05D003590 ORTHO05D004290 8.4e-14 81.3 47 83.0
arahy.Tifrunner.gnm1.ann1.Z3LWFH Arachis hypogaea HOM05D000145 ORTHO05D000115 1.1e-13 80.9 66 71.2
EL10Ac4g08485 Beta vulgaris HOM05D003590 ORTHO05D004290 6.7e-11 71.6 48 75.0
EL10Ac4g08487 Beta vulgaris HOM05D003590 ORTHO05D004290 6.7e-11 71.6 48 75.0


User provided reference genes

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