Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 6.5e-232 807.0 395 100.0
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 6.3e-211 737.3 395 90.9
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 3.4e-180 635.2 391 77.5
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 1.6e-177 626.3 393 77.6
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 2.0e-172 609.4 387 76.0
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 7.3e-167 590.9 387 74.2
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 1.2e-166 590.1 387 73.6
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 3.6e-166 588.6 390 74.1
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 3.6e-166 588.6 388 72.2
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.4e-165 586.6 389 72.8
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.4e-165 586.6 389 72.8
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 1.4e-165 586.6 391 72.6
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 2.4e-165 585.9 391 72.6
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 4.0e-165 585.1 387 72.9
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 9.0e-165 583.9 387 74.4
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 9.0e-165 583.9 390 72.6
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 2.2e-163 579.3 404 69.8
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 1.6e-161 573.2 387 70.8
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 3.5e-161 572.0 391 71.6
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 2.3e-160 569.3 390 70.8
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.6e-160 567.8 391 70.1
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 3.3e-159 565.5 390 70.0
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.3e-159 565.5 390 70.0
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 3.3e-159 565.5 387 69.5
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 3.3e-159 565.5 387 68.5
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 9.6e-159 563.9 390 70.3
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 6.2e-158 561.2 390 69.7
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 6.2e-158 561.2 393 69.2
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 1.4e-157 560.1 387 70.3
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 3.1e-157 558.9 390 69.0
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 6.9e-157 557.8 389 69.2
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 1.2e-156 557.0 387 68.5
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 1.2e-156 557.0 388 69.8
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 2.0e-156 556.2 387 69.5
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 3.4e-156 555.4 387 69.3
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 1.3e-155 553.5 387 68.0
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 1.1e-154 550.4 387 69.5
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 7.1e-154 547.7 394 66.8
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 9.3e-154 547.4 387 69.0
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 9.3e-154 547.4 387 69.0
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 2.7e-153 545.8 387 68.2
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 4.6e-153 545.0 387 68.2
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 7.9e-153 544.3 387 67.7
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 1.3e-152 543.5 387 68.7
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 2.3e-152 542.7 390 65.9
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 3.9e-152 542.0 387 68.0
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 1.1e-151 540.4 389 65.8
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 1.5e-151 540.0 389 66.6
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 9.6e-151 537.3 387 68.2
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 1.6e-150 536.6 387 68.2
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 2.8e-150 535.8 387 68.2
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 3.7e-150 535.4 391 66.8
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 4.8e-150 535.0 387 68.0
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 6.2e-150 534.6 389 65.0
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 6.2e-150 534.6 386 67.4
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 6.2e-150 534.6 390 65.1
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 8.1e-150 534.3 390 67.2
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 1.1e-149 533.9 387 68.2
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 4.0e-149 531.9 386 65.3
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 5.3e-149 531.6 389 64.8
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 6.9e-149 531.2 387 66.7
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 9.9e-148 527.3 387 64.9
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 9.9e-148 527.3 387 67.4
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 1.7e-147 526.6 387 67.7
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 2.9e-147 525.8 388 66.2
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 3.8e-147 525.4 393 65.4
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 3.8e-147 525.4 390 64.6
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 4.9e-147 525.0 387 63.0
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 4.2e-146 521.9 391 67.5
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.2e-145 520.4 402 63.4
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 1.0e-144 517.3 387 62.8
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 1.3e-144 516.9 390 63.8
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 3.0e-144 515.8 387 63.6
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 5.1e-144 515.0 387 63.0
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 1.5e-143 513.5 387 62.5
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 1.9e-143 513.1 387 62.3
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 2.5e-143 512.7 387 64.9
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 3.3e-143 512.3 390 62.8
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 3.3e-143 512.3 395 63.0
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 4.3e-143 511.9 387 63.3
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 7.4e-143 511.1 390 62.8
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 7.4e-143 511.1 387 64.3
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 2.1e-142 509.6 390 62.6
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 4.8e-142 508.4 387 64.6
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 9.0e-141 504.2 377 64.5
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 5.8e-140 501.5 390 62.3
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 7.6e-140 501.1 368 64.7
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 1.3e-136 490.3 390 61.3
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 1.8e-136 490.0 388 60.1
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 5.1e-136 488.4 391 61.6
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 5.7e-135 485.0 386 62.4
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 4.2e-130 468.8 309 71.2
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 5.1e-128 461.8 345 64.6
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 6.9e-125 451.4 309 70.6
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 3.4e-124 449.1 390 55.4
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 5.9e-124 448.4 346 61.6
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 2.7e-121 439.5 309 66.3
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.7e-118 430.3 285 72.6
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 2.8e-118 429.5 279 75.6
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.4e-117 427.2 260 77.7
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 6.5e-115 418.3 277 73.3
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 9.1e-109 397.9 382 50.8
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 9.1e-109 397.9 388 50.8
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 9.4e-106 387.9 387 52.7
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 4.7e-105 385.6 397 49.6
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 6.5e-99 365.2 221 76.5
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.2e-96 355.5 301 56.8
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.8e-93 347.1 237 67.5
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 9.1e-93 344.7 303 55.1
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 2.0e-92 343.6 233 69.1
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.5e-90 337.4 395 47.1
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 1.2e-89 334.3 203 78.8
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 1.0e-88 331.3 236 64.4
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 4.0e-88 329.3 391 44.8
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 4.9e-86 322.4 252 59.5
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 1.2e-81 307.8 388 39.4
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 9.2e-77 291.6 191 69.1
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 6.2e-73 278.9 202 62.9
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.3e-70 271.2 399 39.8
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 1.6e-49 201.1 196 49.0
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 4.7e-49 199.5 133 69.2
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 4.0e-48 196.4 136 66.2
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 1.7e-46 191.0 382 33.5
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.4e-39 166.8 127 66.9
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 2.2e-38 164.1 127 66.1
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 1.2e-36 158.3 96 78.1
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 3.9e-35 153.3 123 58.5
Hma1.2p1_0171F.1_g075730 Hydrangea macrophylla HOM05D005279 ORTHO05D006757 4.0e-24 116.7 94 64.9


User provided reference genes

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