Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010102.1 Olea europaea HOM05D006045 ORTHO05D007678 2.1e-239 832.0 431 100.0
MSTRG.19073 Avicennia marina HOM05D006045 ORTHO05D007678 6.5e-177 624.4 431 75.9
Migut.J00307 Erythranthe guttata HOM05D006045 ORTHO05D007678 5.0e-161 571.6 428 70.3
SGA_v2.0_scaffold126G33761 Striga asiatica HOM05D006045 ORTHO05D007678 2.1e-159 566.2 431 68.9
PGSC0003DMG400008825 Solanum tuberosum HOM05D006045 ORTHO05D007678 1.2e-141 507.3 399 65.4
Sopen09g005740 Solanum pennellii HOM05D006045 ORTHO05D007678 6.4e-140 501.5 400 64.5
CAN.G597.3 Capsicum annuum HOM05D006045 ORTHO05D007678 1.4e-139 500.4 436 60.3
Solyc09g011020.4 Solanum lycopersicum HOM05D006045 ORTHO05D007678 8.6e-137 491.1 400 64.0
DCAR_028758 Daucus carota HOM05D006045 ORTHO05D007678 9.5e-136 487.6 435 59.8
CSS0032526 Camellia sinensis var. sinensis HOM05D006045 ORTHO05D007678 1.8e-134 483.4 435 59.1
TAR623G1560 Trochodendron aralioides HOM05D006045 ORTHO05D007678 2.7e-130 469.5 441 57.6
Cc06_g02350 Coffea canephora HOM05D006045 ORTHO05D007678 5.2e-126 455.3 387 62.3
QL07p030118 Quercus lobata HOM05D006045 ORTHO05D007678 4.4e-125 452.2 435 56.3
QL07p030894 Quercus lobata HOM05D006045 ORTHO05D007678 6.4e-124 448.4 436 56.9
Thecc.05G035700 Theobroma cacao HOM05D006045 ORTHO05D007678 3.5e-122 442.6 439 56.9
CiPaw.09G195700 Carya illinoinensis HOM05D006045 ORTHO05D007678 6.0e-122 441.8 437 57.4
Prupe.6G259100 Prunus persica HOM05D006045 ORTHO05D007678 1.0e-121 441.0 439 56.3
Potri.002G091400 Populus trichocarpa HOM05D006045 ORTHO05D007678 2.3e-121 439.9 413 56.4
Gorai.009G406000 Gossypium raimondii HOM05D006045 ORTHO05D007678 2.5e-120 436.4 438 55.7
Ciclev10011734m.g Citrus clementina HOM05D006045 ORTHO05D007678 5.6e-120 435.3 439 55.1
GSVIVG01034130001 Vitis vinifera HOM05D006045 ORTHO05D007678 1.6e-119 433.7 382 58.9
EL10Ac2g03023 Beta vulgaris HOM05D006045 ORTHO05D007678 3.6e-119 432.6 439 54.9
SalBow1G6939 Salvia bowleyana HOM05D006045 ORTHO05D007678 3.6e-119 432.6 337 68.0
AUR62018119 Chenopodium quinoa HOM05D006045 ORTHO05D007678 8.1e-119 431.4 448 54.2
AUR62034450 Chenopodium quinoa HOM05D006045 ORTHO05D007678 8.1e-119 431.4 438 54.8
HanXRQChr13g0406931 Helianthus annuus HOM05D006045 ORTHO05D007678 8.1e-119 431.4 382 58.4
Gohir.D04G102700 Gossypium hirsutum HOM05D006045 ORTHO05D007678 3.1e-118 429.5 438 55.3
Eucgr.K03104 Eucalyptus grandis HOM05D006045 ORTHO05D007678 5.3e-118 428.7 430 53.5
MD12G1145400 Malus domestica HOM05D006045 ORTHO05D007678 6.9e-118 428.3 382 58.4
ECA248G0328 Erigeron canadensis HOM05D006045 ORTHO05D007678 3.4e-117 426.0 390 57.9
vmacro08642 Vaccinium macrocarpon HOM05D006045 ORTHO05D007678 4.4e-117 425.6 393 56.2
CANSAT35G0136 Cannabis sativa HOM05D006045 ORTHO05D007678 2.9e-116 422.9 443 55.1
Manes.09G092411 Manihot esculenta HOM05D006045 ORTHO05D007678 4.9e-116 422.2 424 54.2
Lsat_1_v5_gn_5_154000 Lactuca sativa HOM05D006045 ORTHO05D007678 1.4e-115 420.6 385 59.0
Gohir.A04G065300 Gossypium hirsutum HOM05D006045 ORTHO05D007678 2.4e-115 419.9 439 54.7
Nn2g11183 Nelumbo nucifera HOM05D006045 ORTHO05D007678 9.3e-115 417.9 406 56.4
Hund15247 Selenicereus undatus HOM05D006045 ORTHO05D007678 2.3e-113 413.3 419 53.9
PGR004G1833 Punica granatum HOM05D006045 ORTHO05D007678 3.9e-113 412.5 436 51.8
Duzib106G0862 Durio zibethinus HOM05D006045 ORTHO05D007678 5.1e-113 412.1 439 54.0
TWI77G0138 Tripterygium wilfordii HOM05D006045 ORTHO05D007678 4.0e-110 402.5 446 52.5
Sed0026133 Sechium edule HOM05D006045 ORTHO05D007678 6.9e-110 401.7 434 51.6
PSO339G1759 Papaver somniferum HOM05D006045 ORTHO05D007678 5.8e-109 398.7 432 50.7
FvH4_6g13250 Fragaria vesca HOM05D006045 ORTHO05D007678 2.9e-108 396.4 444 50.9
RcHm_v2.0_Chr3g0466081 Rosa chinensis HOM05D006045 ORTHO05D007678 4.9e-108 395.6 442 51.1
Lj3A965G74 Lonicera japonica HOM05D006045 ORTHO05D007678 9.3e-107 391.3 356 58.7
Rhsim04G0158800 Rhododendron simsii HOM05D006045 ORTHO05D007678 9.3e-107 391.3 513 47.0
FAN14G1932 Fragaria x ananassa HOM05D006045 ORTHO05D007678 4.6e-106 389.0 455 49.7
FAN02G2147 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.8e-105 387.1 443 49.9
Nitab4.5_0000705g0060 Nicotiana tabacum HOM05D006045 ORTHO05D007678 6.7e-105 385.2 305 64.9
Nitab4.5_0003394g0010 Nicotiana tabacum HOM05D006045 ORTHO05D007678 1.3e-103 380.9 307 64.2
THA.LOC104816254 Tarenaya hassleriana HOM05D006045 ORTHO05D007678 4.8e-103 379.0 398 51.3
MELO3C009242.2 Cucumis melo HOM05D006045 ORTHO05D007678 2.4e-102 376.7 417 51.6
Sabra02G0072200 Salix brachista HOM05D006045 ORTHO05D007678 4.5e-101 372.5 442 48.4
ATR0559G357 Amborella trichopoda HOM05D006045 ORTHO05D007678 1.0e-100 371.3 399 51.4
BolC9t60170H Brassica oleracea HOM05D006045 ORTHO05D007678 8.4e-100 368.2 437 48.3
C09p74360 Brassica napus HOM05D006045 ORTHO05D007678 1.9e-99 367.1 437 48.1
Haze_20828 Corylus avellana HOM05D006045 ORTHO05D007678 9.3e-99 364.8 377 54.9
MBI14_g08020_MAGBIO Magnolia biondii HOM05D006045 ORTHO05D007678 1.2e-98 364.4 405 50.9
AT5G02130 Arabidopsis thaliana HOM05D006045 ORTHO05D007678 1.6e-98 364.0 440 48.9
MD04G1132700 Malus domestica HOM05D006045 ORTHO05D007678 2.7e-98 363.2 330 57.6
CDE06G1975 Ceratophyllum demersum HOM05D006045 ORTHO05D007678 1.0e-97 361.3 431 50.1
BcaB01g06214 Brassica carinata HOM05D006045 ORTHO05D007678 1.8e-97 360.5 387 50.9
Cfa017339 Carpinus fangiana HOM05D006045 ORTHO05D007678 2.3e-97 360.1 384 53.4
Peaxi162Scf00527g00742 Petunia axillaris HOM05D006045 ORTHO05D007678 2.3e-97 360.1 346 56.9
Lj1g0013519 Lotus japonicus HOM05D006045 ORTHO05D007678 5.1e-97 359.0 449 48.3
Thhalv10013663m.g Eutrema salsugineum HOM05D006045 ORTHO05D007678 5.7e-96 355.5 436 47.0
BraA03t09445Z Brassica rapa HOM05D006045 ORTHO05D007678 1.3e-95 354.4 437 47.1
BraA10t45376Z Brassica rapa HOM05D006045 ORTHO05D007678 1.3e-95 354.4 401 48.9
SHI12713 Sapria himalayana HOM05D006045 ORTHO05D007678 1.3e-95 354.4 401 50.4
Sc22g0004440 Simmondsia chinensis HOM05D006045 ORTHO05D007678 1.3e-95 354.4 319 60.8
Aa31LG1G22600 Aethionema arabicum HOM05D006045 ORTHO05D007678 2.1e-95 353.6 404 49.8
CsaV3_3G034720 Cucumis sativus L. HOM05D006045 ORTHO05D007678 2.1e-95 353.6 417 49.9
Lj3g0020199 Lotus japonicus HOM05D006045 ORTHO05D007678 8.2e-95 351.7 391 51.4
Sp6g40310 Schrenkiella parvula HOM05D006045 ORTHO05D007678 4.0e-94 349.4 386 49.7
Carub.0006s0097 Capsella rubella HOM05D006045 ORTHO05D007678 5.3e-94 349.0 439 47.2
AL6G11360 Arabidopsis lyrata HOM05D006045 ORTHO05D007678 6.9e-94 348.6 439 46.7
CARHR211230 Cardamine hirsuta HOM05D006045 ORTHO05D007678 1.2e-93 347.8 388 49.2
A03p00550 Brassica napus HOM05D006045 ORTHO05D007678 7.6e-93 345.1 462 45.0
Lalb_Chr03g0042401 Lupinus albus HOM05D006045 ORTHO05D007678 1.6e-90 337.4 445 47.0
A10p33460 Brassica napus HOM05D006045 ORTHO05D007678 2.7e-90 336.7 434 45.2
arahy.Tifrunner.gnm1.ann1.H3QXFP Arachis hypogaea HOM05D006045 ORTHO05D007678 6.7e-89 332.0 398 48.0
Psat3g136040 Pisum sativum HOM05D006045 ORTHO05D007678 3.1e-86 323.2 413 45.3
Ca_07336_v3 Cicer arietinum L. HOM05D006045 ORTHO05D007678 6.9e-86 322.0 413 46.7
Glyma.18G185200 Glycine max HOM05D006045 ORTHO05D007678 1.2e-85 321.2 448 43.3
Medtr7g062630 Medicago truncatula HOM05D006045 ORTHO05D007678 1.3e-84 317.8 448 43.3
C03p00810 Brassica napus HOM05D006045 ORTHO05D007678 1.8e-78 297.4 392 44.6
ClCG10G021320 Citrullus lanatus HOM05D006045 ORTHO05D007678 4.5e-77 292.7 550 38.9
BcaB01g06067 Brassica carinata HOM05D006045 ORTHO05D007678 1.0e-76 291.6 387 44.7
Aqoxy1G00880 Aquilegia oxysepala HOM05D006045 ORTHO05D007678 5.0e-76 289.3 387 43.7
CiPaw.09G197100 Carya illinoinensis HOM05D006045 ORTHO05D007678 2.5e-75 287.0 216 66.2
Os05g0457700 Oryza sativa ssp. japonica HOM05D006045 ORTHO05D007678 7.9e-74 282.0 431 42.5
VMungo1383G2703 Vigna mungo HOM05D006045 ORTHO05D007678 1.4e-70 271.2 352 45.5
Rhsim04G0160900 Rhododendron simsii HOM05D006045 ORTHO05D007678 3.1e-70 270.0 386 43.5
arahy.Tifrunner.gnm1.ann1.FBGI2B Arachis hypogaea HOM05D006045 ORTHO05D007678 1.2e-69 268.1 315 47.6
FAN05G2873 Fragaria x ananassa HOM05D006045 ORTHO05D007678 1.9e-67 260.8 200 64.5
SEGI_25878 Sequoiadendron giganteum HOM05D006045 ORTHO05D007678 7.2e-67 258.8 385 40.8
HPP92_014298 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.1e-62 245.0 250 52.8
Medtr6g445490 Medicago truncatula HOM05D006045 ORTHO05D007678 2.0e-61 240.7 432 38.0
TPR.G18356 Trifolium pratense HOM05D006045 ORTHO05D007678 4.2e-59 233.0 288 46.5
Phvul.008G118100 Phaseolus vulgaris HOM05D006045 ORTHO05D007678 9.1e-46 188.7 321 37.4
Atru.chr8.2013 Acer truncatum HOM05D006045 ORTHO05D007678 3.7e-39 166.8 447 31.3
PSO063G1044 Papaver somniferum HOM05D006045 ORTHO05D007678 3.2e-38 163.7 201 45.3
SMO361G0160 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 3.5e-37 160.2 336 35.7
Gohir.A04G065314 Gossypium hirsutum HOM05D006045 ORTHO05D007678 4.6e-37 159.8 115 68.7
Pp3c17_13640 Physcomitrium patens HOM05D006045 ORTHO05D007678 3.9e-36 156.8 378 31.2
SMO361G0306 Selaginella moellendorffii HOM05D006045 ORTHO05D007678 3.9e-36 156.8 337 35.9
Mapoly0002s0152 Marchantia polymorpha HOM05D006045 ORTHO05D007678 5.0e-36 156.4 421 30.9
COL.COLO4_14760 Corchorus olitorius HOM05D006045 ORTHO05D007678 8.3e-31 139.0 94 73.4
PSO339G4427 Papaver somniferum HOM05D006045 ORTHO05D007678 9.5e-27 125.6 169 45.0
CBR_g8766 Chara braunii HOM05D006045 ORTHO05D007678 6.8e-25 119.4 466 27.0
Hma1.2p1_0028F.1_g017940 Hydrangea macrophylla HOM05D006045 ORTHO05D007678 2.4e-22 110.9 113 49.6
unitig_21.g21014 Utricularia gibba HOM05D006045 ORTHO05D007678 2.8e-18 97.4 208 35.6
Cpa.g.sc169.5 Carica papaya HOM05D006045 ORTHO05D007678 8.9e-17 92.4 150 39.3
MD07G1261700 Malus domestica HOM05D006045 ORTHO05D007678 1.4e-14 85.1 93 48.4
Zm00001eb351230 Zea mays HOM05D006045 ORTHO05D007678 3.2e-14 84.0 236 31.4
Dinv35575 Davidia involucrata HOM05D006045 ORTHO05D007678 1.5e-11 75.1 211 31.8
HPP92_014299 Vanilla planifolia HOM05D006045 ORTHO05D007678 1.9e-11 74.7 97 47.4
Medtr7g062690 Medicago truncatula HOM05D006045 ORTHO05D007678 1.2e-08 65.5 71 54.9
Lsat_1_v5_gn_1_108300 Lactuca sativa HOM05D000747 ORTHO05D015226 2.0e-08 64.7 95 38.9


User provided reference genes

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