Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010100.1 Olea europaea HOM05D003692 ORTHO05D004295 8.6e-102 373.6 185 100.0
Cpa.g.sc40.66 Carica papaya HOM05D003692 ORTHO05D004295 5.0e-33 145.2 284 36.3
Nitab4.5_0003394g0020 Nicotiana tabacum HOM05D003692 ORTHO05D004295 2.3e-30 136.3 361 32.1
Nitab4.5_0000705g0070 Nicotiana tabacum HOM05D003692 ORTHO05D004295 5.2e-30 135.2 360 32.5
Oeu023073.1 Olea europaea HOM05D003692 ORTHO05D004295 6.7e-30 134.8 363 32.5
CAN.G947.5 Capsicum annuum HOM05D003692 ORTHO05D004295 1.5e-29 133.7 363 32.0
Oeu006893.1 Olea europaea HOM05D003692 ORTHO05D004295 1.5e-29 133.7 330 32.7
CSS0021952 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 3.3e-29 132.5 363 31.1
Sopen09g005760 Solanum pennellii HOM05D003692 ORTHO05D004295 3.3e-29 132.5 363 31.7
Solyc09g011030.3 Solanum lycopersicum HOM05D003692 ORTHO05D004295 5.7e-29 131.7 363 31.7
PGSC0003DMG400008824 Solanum tuberosum HOM05D003692 ORTHO05D004295 5.7e-29 131.7 363 31.1
Oeu001856.1 Olea europaea HOM05D003692 ORTHO05D004295 1.3e-28 130.6 363 31.7
TWI38G1706 Tripterygium wilfordii HOM05D003692 ORTHO05D004295 2.8e-28 129.4 361 30.7
QL07p030140 Quercus lobata HOM05D003692 ORTHO05D004295 6.3e-28 128.3 360 31.1
QL07p030873 Quercus lobata HOM05D003692 ORTHO05D004295 6.3e-28 128.3 360 31.1
Peaxi162Scf00527g00735 Petunia axillaris HOM05D003692 ORTHO05D004295 8.2e-28 127.9 363 30.3
Potri.006G088000 Populus trichocarpa HOM05D003692 ORTHO05D004295 1.4e-27 127.1 361 30.2
CAN.G397.48 Capsicum annuum HOM05D003692 ORTHO05D004295 2.4e-27 126.3 354 30.8
MBI05_g35626_MAGBIO Magnolia biondii HOM05D003692 ORTHO05D004295 2.4e-27 126.3 343 32.7
CiPaw.09G195400 Carya illinoinensis HOM05D003692 ORTHO05D004295 4.1e-27 125.6 348 30.7
Lj2A91G57 Lonicera japonica HOM05D003692 ORTHO05D004295 4.1e-27 125.6 362 28.5
Ciclev10011911m.g Citrus clementina HOM05D003692 ORTHO05D004295 9.1e-27 124.4 348 31.0
Manes.09G092685 Manihot esculenta HOM05D003692 ORTHO05D004295 1.2e-26 124.0 361 30.2
Duzib128G0550 Durio zibethinus HOM05D003692 ORTHO05D004295 7.7e-26 121.3 360 29.2
Haze_20825 Corylus avellana HOM05D003692 ORTHO05D004295 1.0e-25 120.9 349 29.8
Cc06_g02380 Coffea canephora HOM05D003692 ORTHO05D004295 1.3e-25 120.6 360 30.0
COL.COLO4_14767 Corchorus olitorius HOM05D003692 ORTHO05D004295 1.7e-25 120.2 361 29.9
Actinidia26484 Actinidia chinensis HOM05D003692 ORTHO05D004295 2.9e-25 119.4 359 29.2
Cfa017343 Carpinus fangiana HOM05D003692 ORTHO05D004295 3.8e-25 119.0 361 28.8
THA.LOC104816257 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 5.0e-25 118.6 349 29.8
Sed0012536 Sechium edule HOM05D003692 ORTHO05D004295 1.1e-24 117.5 361 28.5
Actinidia11270 Actinidia chinensis HOM05D003692 ORTHO05D004295 1.5e-24 117.1 364 29.7
Eucgr.A01287 Eucalyptus grandis HOM05D003692 ORTHO05D004295 2.5e-24 116.3 344 29.4
Prupe.6G258500 Prunus persica HOM05D003692 ORTHO05D004295 3.2e-24 115.9 361 29.9
MSTRG.10251 Avicennia marina HOM05D003692 ORTHO05D004295 4.2e-24 115.5 349 30.7
CsaV3_4G025150 Cucumis sativus L. HOM05D003692 ORTHO05D004295 4.2e-24 115.5 361 28.8
Thecc.05G036000 Theobroma cacao HOM05D003692 ORTHO05D004295 9.4e-24 114.4 361 28.5
MSTRG.19074 Avicennia marina HOM05D003692 ORTHO05D004295 1.2e-23 114.0 76 76.3
Gorai.012G105200 Gossypium raimondii HOM05D003692 ORTHO05D004295 1.2e-23 114.0 361 27.4
Sp3g07730 Schrenkiella parvula HOM05D003692 ORTHO05D004295 1.2e-23 114.0 350 29.4
BcaC01g04230 Brassica carinata HOM05D003692 ORTHO05D004295 1.6e-23 113.6 344 31.1
BolC3t16634H Brassica oleracea HOM05D003692 ORTHO05D004295 1.6e-23 113.6 344 31.1
CARHR083710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 1.6e-23 113.6 350 30.3
Gohir.A04G083600 Gossypium hirsutum HOM05D003692 ORTHO05D004295 1.6e-23 113.6 361 27.4
MELO3C003143.2 Cucumis melo HOM05D003692 ORTHO05D004295 2.7e-23 112.8 361 28.8
FAN13G1535 Fragaria x ananassa HOM05D003692 ORTHO05D004295 2.7e-23 112.8 292 35.3
RcHm_v2.0_Chr3g0462931 Rosa chinensis HOM05D003692 ORTHO05D004295 2.7e-23 112.8 359 28.1
BcaC05g29519 Brassica carinata HOM05D003692 ORTHO05D004295 3.6e-23 112.5 350 29.1
Carub.0003s0846 Capsella rubella HOM05D003692 ORTHO05D004295 3.6e-23 112.5 350 29.7
FvH4_6g11350 Fragaria vesca HOM05D003692 ORTHO05D004295 3.6e-23 112.5 359 28.4
FAN14G0506 Fragaria x ananassa HOM05D003692 ORTHO05D004295 3.6e-23 112.5 359 28.4
FAN14G3612 Fragaria x ananassa HOM05D003692 ORTHO05D004295 3.6e-23 112.5 359 28.4
Gohir.D04G122300 Gossypium hirsutum HOM05D003692 ORTHO05D004295 3.6e-23 112.5 361 27.4
TAR623G0629 Trochodendron aralioides HOM05D003692 ORTHO05D004295 3.6e-23 112.5 361 29.1
AL3G20500 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 4.7e-23 112.1 350 28.9
FAN09G2852 Fragaria x ananassa HOM05D003692 ORTHO05D004295 4.7e-23 112.1 359 28.1
MD12G1145000 Malus domestica HOM05D003692 ORTHO05D004295 4.7e-23 112.1 348 29.0
Thhalv10020978m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 6.1e-23 111.7 350 30.0
BcaC05g29662 Brassica carinata HOM05D003692 ORTHO05D004295 8.0e-23 111.3 350 29.1
C03p43660 Brassica napus HOM05D003692 ORTHO05D004295 8.0e-23 111.3 344 30.8
BolC5t34516H Brassica oleracea HOM05D003692 ORTHO05D004295 8.0e-23 111.3 350 29.1
AT3G09350 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 1.0e-22 110.9 348 29.0
FAN02G3395 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.0e-22 110.9 359 27.9
Lalb_Chr12g0209541 Lupinus albus HOM05D003692 ORTHO05D004295 1.0e-22 110.9 357 27.7
RcHm_v2.0_Chr7g0180681 Rosa chinensis HOM05D003692 ORTHO05D004295 1.0e-22 110.9 334 29.9
SGA_v2.0_scaffold75G24963 Striga asiatica HOM05D003692 ORTHO05D004295 1.0e-22 110.9 76 73.7
Lj3g0027938 Lotus japonicus HOM05D003692 ORTHO05D004295 1.4e-22 110.5 344 28.8
C05p58660 Brassica napus HOM05D003692 ORTHO05D004295 1.8e-22 110.2 350 28.9
FAN05G1146 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.8e-22 110.2 359 27.9
Sabra06G0067100 Salix brachista HOM05D003692 ORTHO05D004295 2.3e-22 109.8 78 71.8
SEGI_14146 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 2.3e-22 109.8 345 28.7
Lalb_Chr07g0192991 Lupinus albus HOM05D003692 ORTHO05D004295 3.0e-22 109.4 344 29.4
Aqoxy1G00886 Aquilegia oxysepala HOM05D003692 ORTHO05D004295 5.2e-22 108.6 356 28.9
DCAR_012112 Daucus carota HOM05D003692 ORTHO05D004295 5.2e-22 108.6 362 29.0
FvH4_5g15390 Fragaria vesca HOM05D003692 ORTHO05D004295 5.2e-22 108.6 334 29.3
FAN18G0330 Fragaria x ananassa HOM05D003692 ORTHO05D004295 5.2e-22 108.6 334 29.3
MD04G1131900 Malus domestica HOM05D003692 ORTHO05D004295 5.2e-22 108.6 348 29.3
BraA05t22745Z Brassica rapa HOM05D003692 ORTHO05D004295 6.7e-22 108.2 350 28.6
Atru.chr8.2010 Acer truncatum HOM05D003692 ORTHO05D004295 1.2e-21 107.5 76 69.7
FAN08G2733 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.5e-21 107.1 334 29.3
SGA_v2.0_scaffold126G33762 Striga asiatica HOM05D003692 ORTHO05D004295 1.5e-21 107.1 76 69.7
SGA_v2.0_scaffold94G28572 Striga asiatica HOM05D003692 ORTHO05D004295 1.5e-21 107.1 349 27.8
TAR560G0002 Trochodendron aralioides HOM05D003692 ORTHO05D004295 1.5e-21 107.1 361 28.5
EL10As1g23134 Beta vulgaris HOM05D003692 ORTHO05D004295 2.0e-21 106.7 351 27.9
HanXRQChr13g0406761 Helianthus annuus HOM05D003692 ORTHO05D004295 2.6e-21 106.3 76 67.1
Potri.016G100500 Populus trichocarpa HOM05D003692 ORTHO05D004295 2.6e-21 106.3 78 67.9
PGR031G2878 Punica granatum HOM05D003692 ORTHO05D004295 2.6e-21 106.3 78 67.9
Aa31LG3G1840 Aethionema arabicum HOM05D003692 ORTHO05D004295 3.3e-21 105.9 78 69.2
TAR369G0528 Trochodendron aralioides HOM05D003692 ORTHO05D004295 3.3e-21 105.9 347 28.5
Glyma.03G070400 Glycine max HOM05D003692 ORTHO05D004295 4.4e-21 105.5 76 68.4
Rhsim05G0194700 Rhododendron simsii HOM05D003692 ORTHO05D004295 5.7e-21 105.1 76 71.1
arahy.Tifrunner.gnm1.ann1.R5ZI8K Arachis hypogaea HOM05D003692 ORTHO05D004295 7.5e-21 104.8 78 67.9
Ca_11500_v3 Cicer arietinum L. HOM05D003692 ORTHO05D004295 1.7e-20 103.6 360 28.1
Glyma.01G103200 Glycine max HOM05D003692 ORTHO05D004295 1.7e-20 103.6 76 67.1
Lsat_1_v5_gn_5_154881 Lactuca sativa HOM05D003692 ORTHO05D004295 1.7e-20 103.6 78 61.5
GSVIVG01034132001 Vitis vinifera HOM05D003692 ORTHO05D004295 1.7e-20 103.6 76 69.7
arahy.Tifrunner.gnm1.ann1.C3169U Arachis hypogaea HOM05D003692 ORTHO05D004295 2.2e-20 103.2 78 66.7
A03p36010 Brassica napus HOM05D003692 ORTHO05D004295 2.2e-20 103.2 344 28.5
CANSAT35G0909 Cannabis sativa HOM05D003692 ORTHO05D004295 2.2e-20 103.2 78 65.4
HanXRQChr01g0003311 Helianthus annuus HOM05D003692 ORTHO05D004295 2.2e-20 103.2 76 65.8
ClCG04G008060 Citrullus lanatus HOM05D003692 ORTHO05D004295 2.8e-20 102.8 76 67.1
BcaB03g11607 Brassica carinata HOM05D003692 ORTHO05D004295 3.7e-20 102.4 78 67.9
Carub.0006s0099 Capsella rubella HOM05D003692 ORTHO05D004295 3.7e-20 102.4 78 66.7
VMungo0331G1001 Vigna mungo HOM05D003692 ORTHO05D004295 3.7e-20 102.4 76 65.8
Phvul.010G011500 Phaseolus vulgaris HOM05D003692 ORTHO05D004295 6.3e-20 101.7 76 64.5
AT5G02150 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 1.1e-19 100.9 78 64.1
HPP92_006643 Vanilla planifolia HOM05D003692 ORTHO05D004295 1.1e-19 100.9 363 26.7
Hma1.2p1_0877F.1_g231720 Hydrangea macrophylla HOM05D003692 ORTHO05D004295 1.8e-19 100.1 76 68.4
Medtr4g021570 Medicago truncatula HOM05D003692 ORTHO05D004295 2.4e-19 99.8 76 65.8
A05p39620 Brassica napus HOM05D002396 ORTHO05D004295 3.1e-19 99.4 78 65.4
BraA03t12773Z Brassica rapa HOM05D003692 ORTHO05D004295 3.1e-19 99.4 78 65.4
ECA248G3146 Erigeron canadensis HOM05D003692 ORTHO05D004295 3.1e-19 99.4 76 61.8
Lj3A965G75 Lonicera japonica HOM05D003692 ORTHO05D004295 3.1e-19 99.4 77 68.8
unitig_8.g4279 Utricularia gibba HOM05D003692 ORTHO05D004295 4.1e-19 99.0 76 64.5
Actinidia05324 Actinidia chinensis HOM05D003692 ORTHO05D004295 5.3e-19 98.6 76 64.5
ECA248G3834 Erigeron canadensis HOM05D003692 ORTHO05D004295 5.3e-19 98.6 76 61.8
TPR.G5579 Trifolium pratense HOM05D003692 ORTHO05D004295 5.3e-19 98.6 76 64.5
Psat7g237280 Pisum sativum HOM05D003692 ORTHO05D004295 9.1e-19 97.8 76 64.5
AL6G11380 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 2.7e-18 96.3 78 62.8
BcaB04g18532 Brassica carinata HOM05D003692 ORTHO05D004295 2.7e-18 96.3 80 61.2
CAN.G597.5 Capsicum annuum HOM05D003692 ORTHO05D004295 3.5e-18 95.9 65 69.2
CDE07G1498 Ceratophyllum demersum HOM05D003692 ORTHO05D004295 4.5e-18 95.5 76 60.5
Ah.12g059970 Amaranthus hybridus HOM05D003692 ORTHO05D004295 1.0e-17 94.4 76 64.5
SHI12711 Sapria himalayana HOM05D003692 ORTHO05D000023 1.3e-17 94.0 69 63.8
Sc07g0007060 Simmondsia chinensis HOM05D003692 ORTHO05D004295 1.3e-17 94.0 58 74.1
PSO339G0014 Papaver somniferum HOM05D003692 ORTHO05D004295 1.7e-17 93.6 80 61.2
PSO513G0124 Papaver somniferum HOM05D003692 ORTHO05D004295 2.2e-17 93.2 80 61.2
Dinv35578 Davidia involucrata HOM05D003692 ORTHO05D004295 2.9e-17 92.8 70 62.9
PSO478G2467 Papaver somniferum HOM05D003692 ORTHO05D004295 5.0e-17 92.0 78 60.3
Os03g0822700 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 8.5e-17 91.3 353 26.9
Sp6g40290 Schrenkiella parvula HOM05D003692 ORTHO05D004295 8.5e-17 91.3 79 62.0
THA.LOC104823413 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 8.5e-17 91.3 78 56.4
CARHR211210 Cardamine hirsuta HOM05D003692 ORTHO05D004295 1.1e-16 90.9 77 59.7
Migut.J00308 Erythranthe guttata HOM05D003692 ORTHO05D004295 1.9e-16 90.1 76 59.2
Thhalv10010482m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 1.9e-16 90.1 78 57.7
Atru.chr8.2011 Acer truncatum HOM05D003692 ORTHO05D004295 2.5e-16 89.7 70 61.4
Thhalv10014140m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 2.5e-16 89.7 78 59.0
Hund07758 Selenicereus undatus HOM05D003692 ORTHO05D004295 3.2e-16 89.4 76 57.9
Hund29077 Selenicereus undatus HOM05D003692 ORTHO05D004295 3.2e-16 89.4 76 57.9
Zm00001eb062800 Zea mays HOM05D003692 ORTHO05D004295 3.2e-16 89.4 77 62.3
AL5G34790 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 4.2e-16 89.0 78 53.8
Carub.0005s2038 Capsella rubella HOM05D003692 ORTHO05D004295 4.2e-16 89.0 342 25.7
Sp5g08580 Schrenkiella parvula HOM05D003692 ORTHO05D004295 5.5e-16 88.6 78 53.8
vmacro20176 Vaccinium macrocarpon HOM05D003692 ORTHO05D004295 7.2e-16 88.2 70 62.9
AagrBONN_evm.TU.Sc2ySwM_368.3385 Anthoceros agrestis HOM05D003692 ORTHO05D004295 9.4e-16 87.8 75 53.3
ATR0559G081 Amborella trichopoda HOM05D003692 ORTHO05D004295 2.1e-15 86.7 78 55.1
BraA09t40139Z Brassica rapa HOM05D003692 ORTHO05D004295 2.1e-15 86.7 78 52.6
Dinv37149 Davidia involucrata HOM05D003692 ORTHO05D004295 3.6e-15 85.9 70 61.4
A09p46790 Brassica napus HOM05D003692 ORTHO05D004295 4.7e-15 85.5 78 52.6
BcaB01g00236 Brassica carinata HOM05D003692 ORTHO05D004295 1.0e-14 84.3 78 51.3
Hund07755 Selenicereus undatus HOM05D003692 ORTHO05D004295 1.0e-14 84.3 58 67.2
AUR62042383 Chenopodium quinoa HOM05D003692 ORTHO05D004295 1.4e-14 84.0 60 68.3
SEGI_33439 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 2.3e-14 83.2 87 52.9
SMO302G0018 Selaginella moellendorffii HOM05D003692 ORTHO05D004295 3.0e-14 82.8 73 61.6
BcaC07g39737 Brassica carinata HOM05D003692 ORTHO05D004295 4.0e-14 82.4 78 50.0
C08p29100 Brassica napus HOM05D003692 ORTHO05D004295 4.0e-14 82.4 78 50.0
BolC8t50511H Brassica oleracea HOM05D003692 ORTHO05D004295 4.0e-14 82.4 78 50.0
Mapoly0070s0083 Marchantia polymorpha HOM05D003692 ORTHO05D004295 1.2e-13 80.9 78 47.4
AUR62043522 Chenopodium quinoa HOM05D003692 ORTHO05D004295 2.0e-13 80.1 57 68.4
CBR_g66724 Chara braunii HOM05D003692 ORTHO05D004295 2.6e-13 79.7 78 46.2
Pp3c16_19440 Physcomitrium patens HOM05D003692 ORTHO05D004295 5.7e-13 78.6 74 48.6
ECA248G3804 Erigeron canadensis HOM05D003692 ORTHO05D004295 5.4e-11 72.0 76 52.6
AT3G53800 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 7.0e-11 71.6 55 60.0
Pp3c5_26180 Physcomitrium patens HOM05D003692 ORTHO05D004295 1.2e-10 70.9 78 43.6
CSS0018872 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 1.6e-10 70.5 80 51.2
Os03g0271400 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 5.9e-10 68.6 79 46.8
C07p37320 Brassica napus HOM05D003692 ORTHO05D004295 7.2e-08 61.6 63 44.4
BolC7t44242H Brassica oleracea HOM05D003692 ORTHO05D004295 1.6e-07 60.5 61 45.9
CARHR163710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 1.6e-07 60.5 51 52.9
THA.LOC104806556 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 6.1e-07 58.5 74 39.2
Zm00001eb012160 Zea mays HOM05D003692 ORTHO05D004295 4.0e-06 55.8 48 56.2
Nn2g13418 Nelumbo nucifera HOM05D003692 ORTHO05D004295 8.8e-06 54.7 40 65.0


User provided reference genes

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