Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010081.1 Olea europaea HOM05D003094 ORTHO05D003482 6.0e-88 327.4 157 100.0
Oeu052057.1 Olea europaea HOM05D003094 ORTHO05D003482 8.2e-61 237.3 139 83.5
MSTRG.4516 Avicennia marina HOM05D003094 ORTHO05D003482 8.2e-53 210.7 139 74.1
Cc04_g06860 Coffea canephora HOM05D003094 ORTHO05D003482 2.4e-52 209.1 139 74.1
Lj9A424T34 Lonicera japonica HOM05D003094 ORTHO05D003482 5.3e-52 208.0 139 72.7
Migut.D00778 Erythranthe guttata HOM05D003094 ORTHO05D003482 9.1e-52 207.2 139 72.7
SGA_v2.0_scaffold29G12062 Striga asiatica HOM05D003094 ORTHO05D003482 5.0e-50 201.4 139 71.2
vmacro07219 Vaccinium macrocarpon HOM05D003094 ORTHO05D003482 8.5e-50 200.7 139 66.2
Actinidia19943 Actinidia chinensis HOM05D003094 ORTHO05D003482 1.4e-49 199.9 139 69.1
Dinv12225 Davidia involucrata HOM05D003094 ORTHO05D003482 1.4e-49 199.9 139 70.5
Peaxi162Scf00683g00159 Petunia axillaris HOM05D003094 ORTHO05D003482 2.5e-49 199.1 139 69.8
Actinidia36579 Actinidia chinensis HOM05D003094 ORTHO05D003482 9.4e-49 197.2 139 68.3
Nitab4.5_0001986g0070 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.1e-48 196.1 139 68.3
Rhsim10G0183200 Rhododendron simsii HOM05D003094 ORTHO05D003482 7.9e-48 194.1 139 64.7
GSVIVG01008338001 Vitis vinifera HOM05D003094 ORTHO05D003482 1.4e-47 193.4 139 66.9
ClCG06G014600 Citrullus lanatus HOM05D003094 ORTHO05D003482 1.8e-47 193.0 138 68.1
Solyc03g119170.3 Solanum lycopersicum HOM05D003094 ORTHO05D003482 2.3e-47 192.6 139 67.6
CiPaw.16G089100 Carya illinoinensis HOM05D003094 ORTHO05D003482 3.0e-47 192.2 149 60.4
Sopen03g038060 Solanum pennellii HOM05D003094 ORTHO05D003482 3.0e-47 192.2 139 67.6
PGSC0003DMG402005733 Solanum tuberosum HOM05D003094 ORTHO05D003482 3.0e-47 192.2 139 67.6
CSS0029576 Camellia sinensis var. sinensis HOM05D003094 ORTHO05D003482 6.7e-47 191.0 138 64.5
Nitab4.5_0004028g0060 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.7e-47 191.0 139 66.9
Nitab4.5_0004955g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 6.7e-47 191.0 139 67.6
Thecc.07G091700 Theobroma cacao HOM05D003094 ORTHO05D003482 8.8e-47 190.7 139 65.5
Duzib213G0897 Durio zibethinus HOM05D003094 ORTHO05D003482 1.1e-46 190.3 139 64.7
Gorai.013G169300 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.1e-46 190.3 139 65.5
Nitab4.5_0008678g0040 Nicotiana tabacum HOM05D003094 ORTHO05D003482 1.1e-46 190.3 139 66.9
Cpa.g.sc51.5 Carica papaya HOM05D003094 ORTHO05D003482 1.5e-46 189.9 138 63.8
Prupe.5G224900 Prunus persica HOM05D003094 ORTHO05D003482 1.5e-46 189.9 138 65.2
Gohir.D13G152004 Gossypium hirsutum HOM05D003094 ORTHO05D003482 2.0e-46 189.5 139 64.7
Nitab4.5_0008639g0020 Nicotiana tabacum HOM05D003094 ORTHO05D003482 2.0e-46 189.5 145 64.1
Sabra15G0041200 Salix brachista HOM05D003094 ORTHO05D003482 2.0e-46 189.5 142 63.4
CAN.G1129.13 Capsicum annuum HOM05D003094 ORTHO05D003482 2.6e-46 189.1 139 66.9
Gohir.D13G151300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 5.7e-46 188.0 139 64.0
QL10p026547 Quercus lobata HOM05D003094 ORTHO05D003482 5.7e-46 188.0 135 64.4
FAN05G2182 Fragaria x ananassa HOM05D003094 ORTHO05D003482 7.4e-46 187.6 138 65.2
FvH4_6g26830 Fragaria vesca HOM05D003094 ORTHO05D003482 1.7e-45 186.4 138 64.5
FAN14G2495 Fragaria x ananassa HOM05D003094 ORTHO05D003482 1.7e-45 186.4 138 64.5
FAN02G1016 Fragaria x ananassa HOM05D003094 ORTHO05D003482 2.2e-45 186.0 138 65.2
TAR374G0309 Trochodendron aralioides HOM05D003094 ORTHO05D003482 2.2e-45 186.0 149 59.7
Haze_18734 Corylus avellana HOM05D003094 ORTHO05D003482 2.8e-45 185.7 149 59.1
Sed0020442 Sechium edule HOM05D003094 ORTHO05D003482 2.8e-45 185.7 138 63.8
TWI60G1358 Tripterygium wilfordii HOM05D003094 ORTHO05D003482 3.7e-45 185.3 137 65.0
Eucgr.K02236 Eucalyptus grandis HOM05D003094 ORTHO05D003482 6.3e-45 184.5 139 64.0
Phvul.002G182800 Phaseolus vulgaris HOM05D003094 ORTHO05D003482 6.3e-45 184.5 138 65.2
SalBow7G3604 Salvia bowleyana HOM05D003094 ORTHO05D003482 6.3e-45 184.5 139 67.6
Gohir.A13G146300 Gossypium hirsutum HOM05D003094 ORTHO05D003482 1.1e-44 183.7 139 62.6
Cfa019732 Carpinus fangiana HOM05D003094 ORTHO05D003482 2.4e-44 182.6 149 59.1
Potri.015G044100 Populus trichocarpa HOM05D003094 ORTHO05D003482 3.1e-44 182.2 138 62.3
Gohir.A13G146900 Gossypium hirsutum HOM05D003094 ORTHO05D003482 4.1e-44 181.8 139 62.6
Lalb_Chr08g0242311 Lupinus albus HOM05D003094 ORTHO05D003482 5.3e-44 181.4 138 62.3
COL.COLO4_27184 Corchorus olitorius HOM05D003094 ORTHO05D003482 6.9e-44 181.0 139 61.2
Glyma.05G139400 Glycine max HOM05D003094 ORTHO05D003482 6.9e-44 181.0 139 63.3
arahy.Tifrunner.gnm1.ann1.D1K70W Arachis hypogaea HOM05D003094 ORTHO05D003482 1.2e-43 180.3 139 63.3
TAR374G0733 Trochodendron aralioides HOM05D003094 ORTHO05D003482 1.5e-43 179.9 139 63.3
Glyma.08G094700 Glycine max HOM05D003094 ORTHO05D003482 2.0e-43 179.5 138 63.0
Sc04g0003380 Simmondsia chinensis HOM05D003094 ORTHO05D003482 3.4e-43 178.7 149 57.0
MELO3C017325.2 Cucumis melo HOM05D003094 ORTHO05D003482 4.5e-43 178.3 138 63.8
CsaV3_1G004020 Cucumis sativus L. HOM05D003094 ORTHO05D003482 7.7e-43 177.6 138 63.0
MBI16_g44830_MAGBIO Magnolia biondii HOM05D003094 ORTHO05D003482 1.7e-42 176.4 149 56.4
arahy.Tifrunner.gnm1.ann1.2IG2A1 Arachis hypogaea HOM05D003094 ORTHO05D003482 2.2e-42 176.0 139 61.9
CANSAT80G1577 Cannabis sativa HOM05D003094 ORTHO05D003482 3.8e-42 175.3 138 61.6
Lj4g0013095 Lotus japonicus HOM05D003094 ORTHO05D003482 6.5e-42 174.5 139 61.2
THA.LOC104820380 Tarenaya hassleriana HOM05D003094 ORTHO05D003482 8.5e-42 174.1 139 61.9
MD06G1220500 Malus domestica HOM05D003094 ORTHO05D003482 1.4e-41 173.3 138 61.6
AL3G31470 Arabidopsis lyrata HOM05D003094 ORTHO05D003482 1.9e-41 172.9 138 60.1
AT3G18240 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 1.9e-41 172.9 138 59.4
CDE11G0955 Ceratophyllum demersum HOM05D003094 ORTHO05D003482 1.9e-41 172.9 151 55.6
Aa31LG8G5090 Aethionema arabicum HOM05D003094 ORTHO05D003482 2.5e-41 172.6 149 53.7
MD14G1229900 Malus domestica HOM05D003094 ORTHO05D003482 4.2e-41 171.8 138 62.3
VMungo0251G1973 Vigna mungo HOM05D003094 ORTHO05D003482 4.2e-41 171.8 140 62.1
Psat7g083520 Pisum sativum HOM05D003094 ORTHO05D003482 5.5e-41 171.4 139 60.4
Manes.05G133000 Manihot esculenta HOM05D003094 ORTHO05D003482 7.2e-41 171.0 138 60.1
Carub.0003s1800 Capsella rubella HOM05D003094 ORTHO05D003482 9.4e-41 170.6 138 59.4
Os08g0513300 Oryza sativa ssp. japonica HOM05D003094 ORTHO05D003482 1.2e-40 170.2 140 60.0
Prupe.4G184600 Prunus persica HOM05D003094 ORTHO05D003482 1.2e-40 170.2 137 58.4
Sp3g16360 Schrenkiella parvula HOM05D003094 ORTHO05D003482 2.1e-40 169.5 149 53.7
CARHR093590 Cardamine hirsuta HOM05D003094 ORTHO05D003482 2.7e-40 169.1 149 55.0
Ciclev10020325m.g Citrus clementina HOM05D003094 ORTHO05D003482 6.1e-40 167.9 138 58.0
Thhalv10020806m.g Eutrema salsugineum HOM05D003094 ORTHO05D003482 6.1e-40 167.9 138 58.0
PGR044G0078 Punica granatum HOM05D003094 ORTHO05D003482 6.1e-40 167.9 138 58.7
PSO017G6706 Papaver somniferum HOM05D003094 ORTHO05D003482 1.0e-39 167.2 139 60.4
Atru.chr9.905 Acer truncatum HOM05D003094 ORTHO05D003482 1.4e-39 166.8 138 58.0
Ca_11586_v3 Cicer arietinum L. HOM05D003094 ORTHO05D003482 1.4e-39 166.8 138 59.4
A05p31440 Brassica napus HOM05D003094 ORTHO05D003482 1.8e-39 166.4 138 58.7
BraA05t21983Z Brassica rapa HOM05D003094 ORTHO05D003482 1.8e-39 166.4 138 58.7
AT4G21460 Arabidopsis thaliana HOM05D003094 ORTHO05D003482 2.3e-39 166.0 138 57.2
PSO063G0897 Papaver somniferum HOM05D003094 ORTHO05D003482 3.0e-39 165.6 139 59.7
BcaC05g28647 Brassica carinata HOM05D003094 ORTHO05D003482 5.2e-39 164.9 138 58.0
C05p47760 Brassica napus HOM05D003094 ORTHO05D003482 5.2e-39 164.9 138 58.0
BolC5t33491H Brassica oleracea HOM05D003094 ORTHO05D003482 5.2e-39 164.9 138 58.0
HanXRQChr14g0446571 Helianthus annuus HOM05D003094 ORTHO05D003482 1.1e-38 163.7 138 55.8
Gorai.013G170500 Gossypium raimondii HOM05D003094 ORTHO05D003482 1.5e-38 163.3 107 71.0
TPR.G5116 Trifolium pratense HOM05D003094 ORTHO05D003482 1.5e-38 163.3 138 58.7
unitig_21.g20424 Utricularia gibba HOM05D003094 ORTHO05D003482 2.8e-37 159.1 138 58.7
ECA238G4750 Erigeron canadensis HOM05D003094 ORTHO05D003482 3.7e-37 158.7 138 55.8
HPP92_008848 Vanilla planifolia HOM05D003094 ORTHO05D003482 4.8e-37 158.3 142 57.0
AUR62040348 Chenopodium quinoa HOM05D003094 ORTHO05D003482 6.3e-37 157.9 138 57.2
AUR62042498 Chenopodium quinoa HOM05D003094 ORTHO05D003482 2.4e-36 156.0 138 57.2
Lsat_1_v5_gn_2_64400 Lactuca sativa HOM05D003094 ORTHO05D003482 2.4e-36 156.0 138 52.9
EL10Ac7g16627 Beta vulgaris HOM05D003094 ORTHO05D003482 4.1e-36 155.2 139 56.1
EL10Ac4g10181 Beta vulgaris HOM05D003094 ORTHO05D003482 5.3e-36 154.8 140 56.4
HPP92_008864 Vanilla planifolia HOM05D003094 ORTHO05D003482 7.0e-36 154.5 142 54.2
ATR0757G079 Amborella trichopoda HOM05D003094 ORTHO05D003482 1.6e-35 153.3 150 51.3
Hund11930 Selenicereus undatus HOM05D003094 ORTHO05D003482 1.6e-35 153.3 138 55.1
Zm00001eb143930 Zea mays HOM05D003094 ORTHO05D003482 1.3e-34 150.2 140 52.9
RcHm_v2.0_Chr2g0128191 Rosa chinensis HOM05D003094 ORTHO05D003482 2.7e-27 125.9 75 77.3
Gohir.A06G136104 Gossypium hirsutum HOM05D003094 ORTHO05D003482 6.1e-24 114.8 101 57.4
SEGI_02552 Sequoiadendron giganteum HOM05D003094 ORTHO05D003482 8.0e-24 114.4 138 43.5
TAR622G0867 Trochodendron aralioides HOM05D003094 ORTHO05D009164 1.0e-23 114.0 85 64.7
Mapoly0002s0206 Marchantia polymorpha HOM05D003094 ORTHO05D003482 8.6e-18 94.4 84 53.6
Pp3c18_10090 Physcomitrium patens HOM05D003094 ORTHO05D003482 3.3e-17 92.4 72 59.7
CBR_g23797 Chara braunii HOM05D003094 ORTHO05D003482 2.6e-14 82.8 99 46.5
SMO367G0461 Selaginella moellendorffii HOM05D003094 ORTHO05D003482 1.9e-09 66.6 71 43.7


User provided reference genes

Program Settings