Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010052.1 Olea europaea HOM05D003311 ORTHO05D003707 7.1e-145 518.5 608 100.0
Lalb_Chr03g0024711 Lupinus albus HOM05D003311 ORTHO05D003707 1.3e-29 135.6 172 41.3
Dinv04967 Davidia involucrata HOM05D003311 ORTHO05D003707 2.4e-28 131.3 197 39.1
Duzib052G0176 Durio zibethinus HOM05D003311 ORTHO05D003707 1.2e-27 129.0 151 41.1
CiPaw.06G125100 Carya illinoinensis HOM05D003311 ORTHO05D003707 1.6e-27 128.6 158 42.4
GSVIVG01024081001 Vitis vinifera HOM05D003311 ORTHO05D003707 1.6e-27 128.6 167 40.7
SalBow6G2103 Salvia bowleyana HOM05D003311 ORTHO05D003707 2.1e-27 128.3 171 45.0
Duzib132G0547 Durio zibethinus HOM05D003311 ORTHO05D003707 2.7e-27 127.9 168 39.3
QL11p047628 Quercus lobata HOM05D003311 ORTHO05D003707 7.9e-27 126.3 145 42.1
Duzib099G0001 Durio zibethinus HOM05D003311 ORTHO05D003707 5.1e-26 123.6 177 37.3
Oeu010053.1 Olea europaea HOM05D003311 ORTHO05D003707 5.1e-26 123.6 167 38.9
Lalb_Chr01g0001331 Lupinus albus HOM05D003311 ORTHO05D003707 6.7e-26 123.2 151 41.7
Actinidia20487 Actinidia chinensis HOM05D000144 ORTHO05D003707 8.7e-26 122.9 174 39.1
Cfa005186 Carpinus fangiana HOM05D003311 ORTHO05D003707 8.7e-26 122.9 177 39.0
Sc08g0003160 Simmondsia chinensis HOM05D003311 ORTHO05D003707 8.7e-26 122.9 183 36.6
CAN.G588.28 Capsicum annuum HOM05D003311 ORTHO05D003707 1.1e-25 122.5 180 39.4
Potri.004G168600 Populus trichocarpa HOM05D003311 ORTHO05D003707 1.5e-25 122.1 164 39.0
Oeu008607.1 Olea europaea HOM05D003311 ORTHO05D003707 1.9e-25 121.7 149 39.6
CSS0038966 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 2.5e-25 121.3 176 38.1
Ciclev10028101m.g Citrus clementina HOM05D003311 ORTHO05D003707 3.3e-25 120.9 189 35.4
Sabra09G0099300 Salix brachista HOM05D003311 ORTHO05D003707 4.3e-25 120.6 171 38.0
TAR628G0207 Trochodendron aralioides HOM05D003311 ORTHO05D003707 5.6e-25 120.2 168 38.7
Potri.009G129900 Populus trichocarpa HOM05D003311 ORTHO05D003707 7.4e-25 119.8 142 41.5
Hund00043 Selenicereus undatus HOM05D003311 ORTHO05D003707 7.4e-25 119.8 163 39.3
Solyc10g054900.2 Solanum lycopersicum HOM05D003311 ORTHO05D003707 7.4e-25 119.8 167 38.9
Oeu008608.1 Olea europaea HOM05D003311 ORTHO05D003707 9.6e-25 119.4 184 37.0
Rhsim05G0063000 Rhododendron simsii HOM05D003311 ORTHO05D003707 9.6e-25 119.4 153 41.8
Thecc.02G066700 Theobroma cacao HOM05D003311 ORTHO05D003707 9.6e-25 119.4 171 37.4
Atru.chr5.3230 Acer truncatum HOM05D003311 ORTHO05D003707 1.3e-24 119.0 174 37.9
Aqoxy5G01799 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 1.3e-24 119.0 174 35.1
Atru.chr5.3229 Acer truncatum HOM05D003311 ORTHO05D003707 2.1e-24 118.2 171 40.4
MSTRG.16857 Avicennia marina HOM05D003311 ORTHO05D003707 2.1e-24 118.2 151 39.1
Sabra04G0113000 Salix brachista HOM05D003311 ORTHO05D003707 2.1e-24 118.2 175 38.9
Hund06406 Selenicereus undatus HOM05D003396 ORTHO05D003646 2.1e-24 118.2 153 39.9
Sopen10g024820 Solanum pennellii HOM05D003311 ORTHO05D003707 2.8e-24 117.9 163 38.7
COL.COLO4_17258 Corchorus olitorius HOM05D003311 ORTHO05D003707 4.8e-24 117.1 172 36.0
Medtr4g075333 Medicago truncatula HOM05D003311 ORTHO05D003707 4.8e-24 117.1 162 39.5
Sopen10g024840 Solanum pennellii HOM05D003311 ORTHO05D003707 4.8e-24 117.1 152 41.4
AUR62013087 Chenopodium quinoa HOM05D003311 ORTHO05D003707 8.1e-24 116.3 172 38.4
vmacro02251 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 8.1e-24 116.3 173 37.0
Eucgr.L01869 Eucalyptus grandis HOM05D003311 ORTHO05D003707 1.1e-23 115.9 179 35.2
CSS0033713 Camellia sinensis var. sinensis HOM05D003311 ORTHO05D003707 1.4e-23 115.5 173 39.3
Nn5g29097 Nelumbo nucifera HOM05D003311 ORTHO05D003707 1.4e-23 115.5 193 34.2
DCAR_022953 Daucus carota HOM05D003311 ORTHO05D003707 1.8e-23 115.2 144 39.6
Lj9A389T67 Lonicera japonica HOM05D003311 ORTHO05D003707 1.8e-23 115.2 185 34.6
Rhsim11G0187900 Rhododendron simsii HOM05D003311 ORTHO05D003707 2.4e-23 114.8 180 36.1
PGR042G2254 Punica granatum HOM05D003311 ORTHO05D003707 3.1e-23 114.4 154 36.4
Gorai.002G193500 Gossypium raimondii HOM05D003311 ORTHO05D003707 4.0e-23 114.0 144 37.5
Sopen10g024830 Solanum pennellii HOM05D003311 ORTHO05D003707 4.0e-23 114.0 163 38.0
PGSC0003DMG400001631 Solanum tuberosum HOM05D003311 ORTHO05D003707 4.0e-23 114.0 151 41.1
Gohir.D01G156000 Gossypium hirsutum HOM05D003311 ORTHO05D003707 5.3e-23 113.6 144 37.5
Sopen01g053220 Solanum pennellii HOM05D003311 ORTHO05D003707 5.3e-23 113.6 164 39.6
CiPaw.05G077500 Carya illinoinensis HOM05D003311 ORTHO05D003707 6.9e-23 113.2 153 38.6
CsaV3_2G015730 Cucumis sativus L. HOM05D003311 ORTHO05D003707 6.9e-23 113.2 164 36.6
Gohir.A01G164100 Gossypium hirsutum HOM05D003311 ORTHO05D003707 9.0e-23 112.8 144 37.5
TWI79G0740 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 9.0e-23 112.8 171 39.8
Actinidia00597 Actinidia chinensis HOM05D003311 ORTHO05D003707 1.2e-22 112.5 150 38.7
AUR62010091 Chenopodium quinoa HOM05D003311 ORTHO05D003707 1.2e-22 112.5 171 36.3
ClCG02G011360 Citrullus lanatus HOM05D003311 ORTHO05D003707 1.5e-22 112.1 164 36.6
ClCG02G011540 Citrullus lanatus HOM05D003311 ORTHO05D003707 1.5e-22 112.1 164 36.6
Cpa.g.sc37.189 Carica papaya HOM05D003311 ORTHO05D003707 2.0e-22 111.7 151 39.1
PGSC0003DMG400004441 Solanum tuberosum HOM05D003311 ORTHO05D003707 2.6e-22 111.3 144 38.9
MSTRG.5426 Avicennia marina HOM05D003311 ORTHO05D003707 3.4e-22 110.9 176 36.4
HanXRQChr07g0186871 Helianthus annuus HOM05D003311 ORTHO05D003707 3.4e-22 110.9 184 36.4
Nitab4.5_0000956g0190 Nicotiana tabacum HOM05D003311 ORTHO05D003707 3.4e-22 110.9 141 37.6
MELO3C020785.2 Cucumis melo HOM05D003311 ORTHO05D003707 4.5e-22 110.5 164 36.6
Hma1.2p1_4000F.1_g338120 Hydrangea macrophylla HOM05D003311 ORTHO05D003707 4.5e-22 110.5 132 41.7
Peaxi162Scf00538g00520 Petunia axillaris HOM05D003311 ORTHO05D003707 4.5e-22 110.5 146 39.0
TPR.G17164 Trifolium pratense HOM05D003311 ORTHO05D003707 4.5e-22 110.5 162 36.4
Sed0012527 Sechium edule HOM05D003311 ORTHO05D003707 5.8e-22 110.2 164 37.2
PGSC0003DMG400001243 Solanum tuberosum HOM05D003311 ORTHO05D003707 5.8e-22 110.2 140 38.6
Ca_19004_v3 Cicer arietinum L. HOM05D003311 ORTHO05D003707 7.6e-22 109.8 164 38.4
Peaxi162Scf00362g00962 Petunia axillaris HOM05D003311 ORTHO05D003707 7.6e-22 109.8 151 39.1
Sed0022693 Sechium edule HOM05D003311 ORTHO05D003707 7.6e-22 109.8 180 34.4
DCAR_003701 Daucus carota HOM05D003311 ORTHO05D003707 9.9e-22 109.4 166 35.5
Lsat_1_v5_gn_3_45680 Lactuca sativa HOM05D003311 ORTHO05D003707 1.3e-21 109.0 167 36.5
arahy.Tifrunner.gnm1.ann1.6SU9IG Arachis hypogaea HOM05D003311 ORTHO05D003707 1.7e-21 108.6 148 39.2
arahy.Tifrunner.gnm1.ann1.M74JA5 Arachis hypogaea HOM05D003311 ORTHO05D003707 1.7e-21 108.6 149 38.9
Lj3g0005308 Lotus japonicus HOM05D003311 ORTHO05D003707 2.2e-21 108.2 153 37.9
Gohir.D04G164900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 2.9e-21 107.8 151 39.1
Gorai.012G153300 Gossypium raimondii HOM05D003311 ORTHO05D003707 2.9e-21 107.8 151 39.1
Phvul.011G026700 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 2.9e-21 107.8 184 35.9
Prupe.8G160900 Prunus persica HOM05D003311 ORTHO05D003707 3.8e-21 107.5 171 39.8
RcHm_v2.0_Chr6g0245161 Rosa chinensis HOM05D003311 ORTHO05D003707 3.8e-21 107.5 186 36.0
TWI75G0647 Tripterygium wilfordii HOM05D003311 ORTHO05D003707 3.8e-21 107.5 170 37.6
Glyma.04G005400 Glycine max HOM05D003311 ORTHO05D003707 4.9e-21 107.1 173 37.6
HanXRQChr10g0294871 Helianthus annuus HOM05D003311 ORTHO05D003707 6.4e-21 106.7 176 36.4
unitig_744.g24265 Utricularia gibba HOM05D003311 ORTHO05D003707 6.4e-21 106.7 174 34.5
HanXRQChr10g0290731 Helianthus annuus HOM05D003311 ORTHO05D003707 8.4e-21 106.3 146 39.0
MELO3C013376.2 Cucumis melo HOM05D003311 ORTHO05D003707 1.1e-20 105.9 146 39.0
Nitab4.5_0013889g0010 Nicotiana tabacum HOM05D003311 ORTHO05D003707 1.1e-20 105.9 141 36.9
ECA246G0279 Erigeron canadensis HOM05D003311 ORTHO05D003707 1.9e-20 105.1 163 37.4
Gohir.A04G122900 Gossypium hirsutum HOM05D003311 ORTHO05D003707 1.9e-20 105.1 151 37.7
CANSAT25G1598 Cannabis sativa HOM05D003311 ORTHO05D003707 2.5e-20 104.8 183 36.1
Aqoxy5G01798 Aquilegia oxysepala HOM05D003311 ORTHO05D003707 3.2e-20 104.4 183 33.9
MD10G1118600 Malus domestica HOM05D003311 ORTHO05D003707 4.2e-20 104.0 177 36.7
TAR376G0773 Trochodendron aralioides HOM05D003311 ORTHO05D003707 5.5e-20 103.6 150 38.7
Eucgr.I01377 Eucalyptus grandis HOM05D003311 ORTHO05D003707 7.1e-20 103.2 164 33.5
Ciclev10029326m.g Citrus clementina HOM05D003311 ORTHO05D003707 9.3e-20 102.8 145 37.9
FAN27G1129 Fragaria x ananassa HOM05D003311 ORTHO05D003707 1.2e-19 102.4 170 37.6
FAN15G0502 Fragaria x ananassa HOM05D003311 ORTHO05D003707 1.6e-19 102.1 170 37.1
FAN24G0785 Fragaria x ananassa HOM05D003311 ORTHO05D003707 1.6e-19 102.1 170 37.1
MD05G1116400 Malus domestica HOM05D003311 ORTHO05D003707 1.6e-19 102.1 154 39.0
FvH4_2g01970 Fragaria vesca HOM05D003311 ORTHO05D003707 2.1e-19 101.7 170 37.1
FAN20G1603 Fragaria x ananassa HOM05D003311 ORTHO05D003707 2.1e-19 101.7 170 37.1
ECA234G1895 Erigeron canadensis HOM05D003311 ORTHO05D003707 2.7e-19 101.3 147 38.1
Haze_02195 Corylus avellana HOM05D003311 ORTHO05D003707 3.5e-19 100.9 145 37.2
HanXRQChr10g0289061 Helianthus annuus HOM05D003311 ORTHO05D003707 4.6e-19 100.5 179 35.2
VMungo1309G0179 Vigna mungo HOM05D003311 ORTHO05D003707 2.3e-18 98.2 179 36.3
GSVIVG01024076001 Vitis vinifera HOM05D003311 ORTHO05D003707 3.0e-18 97.8 172 35.5
SalBow3G2231 Salvia bowleyana HOM05D003311 ORTHO05D003707 8.7e-18 96.3 164 36.0
SGA_v2.0_scaffold58G20458 Striga asiatica HOM05D003311 ORTHO05D003707 8.7e-18 96.3 162 39.5
MBI05_g26897_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 1.1e-17 95.9 125 40.8
CAN.G104.8 Capsicum annuum HOM05D003311 ORTHO05D003707 1.9e-17 95.1 162 33.3
MBI05_g46239_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 1.9e-17 95.1 155 33.5
EL10Ac9g21436 Beta vulgaris HOM05D003311 ORTHO05D003707 2.5e-17 94.7 149 35.6
QL05p072824 Quercus lobata HOM05D003311 ORTHO05D008853 3.3e-17 94.4 102 44.1
ClCG00G004470 Citrullus lanatus HOM05D003311 ORTHO05D003707 4.3e-17 94.0 123 39.8
Phvul.009G024900 Phaseolus vulgaris HOM05D003311 ORTHO05D003707 5.6e-17 93.6 170 35.3
Ah.01g009150 Amaranthus hybridus HOM05D003396 ORTHO05D003646 3.7e-16 90.9 127 35.4
PSO170G2430 Papaver somniferum HOM05D003311 ORTHO05D003707 3.7e-16 90.9 182 34.1
unitig_21.g20802 Utricularia gibba HOM05D003311 ORTHO05D003707 3.7e-16 90.9 142 33.8
MSTRG.20036 Avicennia marina HOM05D003311 ORTHO05D003707 4.8e-16 90.5 124 41.1
Nn1g05901 Nelumbo nucifera HOM05D003311 ORTHO05D003707 8.2e-16 89.7 171 33.9
MBI09_g00986_MAGBIO Magnolia biondii HOM05D003311 ORTHO05D003707 1.1e-15 89.4 152 33.6
SGA_v2.0_scaffold32G13229 Striga asiatica HOM05D003311 ORTHO05D003707 1.1e-15 89.4 176 30.7
DCAR_003704 Daucus carota HOM05D003311 ORTHO05D003707 1.8e-15 88.6 172 31.4
DCAR_003702 Daucus carota HOM05D003311 ORTHO05D003707 2.4e-15 88.2 145 34.5
PSO700G0002 Papaver somniferum HOM05D003311 ORTHO05D003707 3.1e-15 87.8 182 33.0
Sp7g37040 Schrenkiella parvula HOM05D003311 ORTHO05D003707 3.1e-15 87.8 146 34.2
unitig_0.g832 Utricularia gibba HOM05D003311 ORTHO05D003707 3.1e-15 87.8 152 33.6
Cc02_g16490 Coffea canephora HOM05D003311 ORTHO05D003707 4.0e-15 87.4 148 35.8
THA.LOC104824774 Tarenaya hassleriana HOM05D003311 ORTHO05D003707 5.3e-15 87.0 171 33.9
Aa31LG7G15540 Aethionema arabicum HOM05D003311 ORTHO05D003707 9.0e-15 86.3 175 32.6
Carub.0007s0062 Capsella rubella HOM05D003311 ORTHO05D003707 2.6e-14 84.7 181 32.0
ClCG02G004300 Citrullus lanatus HOM05D003311 ORTHO05D003707 5.8e-14 83.6 220 28.6
BraA01t00013Z Brassica rapa HOM05D003311 ORTHO05D003707 1.0e-13 82.8 181 30.4
Nitab4.5_0000283g0120 Nicotiana tabacum HOM05D003311 ORTHO05D003707 1.0e-13 82.8 151 33.1
AL7G10640 Arabidopsis lyrata HOM05D003311 ORTHO05D003707 1.3e-13 82.4 180 31.1
AT4G38770 Arabidopsis thaliana HOM05D003311 ORTHO05D003707 1.3e-13 82.4 146 32.2
BcaNung01299 Brassica carinata HOM05D003311 ORTHO05D003707 4.9e-13 80.5 175 29.7
BolC1t00017H Brassica oleracea HOM05D003311 ORTHO05D003707 4.9e-13 80.5 175 29.7
Thhalv10025123m.g Eutrema salsugineum HOM05D003311 ORTHO05D003707 8.4e-13 79.7 168 29.8
THA.LOC104807787 Tarenaya hassleriana HOM05D003311 ORTHO05D003707 8.4e-13 79.7 146 34.9
BcaB03g12224 Brassica carinata HOM05D003311 ORTHO05D003707 9.3e-12 76.3 148 29.1
A08p24020 Brassica napus HOM05D003311 ORTHO05D003707 1.6e-11 75.5 147 29.3
BraA08t34359Z Brassica rapa HOM05D003311 ORTHO05D003707 1.6e-11 75.5 147 29.3
BcaC01g00253 Brassica carinata HOM05D003311 ORTHO05D003707 3.5e-11 74.3 147 28.6
C03p77310 Brassica napus HOM05D003311 ORTHO05D003707 3.5e-11 74.3 147 28.6
BolC3t19984H Brassica oleracea HOM05D003311 ORTHO05D003707 3.5e-11 74.3 147 28.6
Duzib248G1175 Durio zibethinus HOM05D003311 ORTHO05D003707 6.1e-11 73.6 131 32.8
Nitab4.5_0000980g0220 Nicotiana tabacum HOM05D003311 ORTHO05D003707 6.1e-11 73.6 95 36.8
Psat7g138320 Pisum sativum HOM05D003311 ORTHO05D003707 1.0e-10 72.8 122 34.4
vmacro17380 Vaccinium macrocarpon HOM05D003311 ORTHO05D003707 1.0e-10 72.8 102 40.2
CDE08G0629 Ceratophyllum demersum HOM05D003311 ORTHO05D003707 1.3e-10 72.4 152 34.2
QL09p030113 Quercus lobata HOM05D003311 ORTHO05D003707 1.5e-09 68.9 98 33.7
Os03g0245200 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 4.3e-09 67.4 122 31.1
HPP92_022646 Vanilla planifolia HOM05D003311 ORTHO05D003707 4.3e-09 67.4 149 31.5
Zm00001eb398790 Zea mays HOM05D003311 ORTHO05D003707 9.7e-09 66.2 113 32.7
Os10g0149800 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 1.6e-08 65.5 170 29.4
Zm00001eb026530 Zea mays HOM05D003311 ORTHO05D003707 4.8e-08 63.9 84 39.3
Os10g0148100 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 6.3e-08 63.5 171 29.2
Os10g0149400 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 2.4e-07 61.6 140 30.7
Os10g0149000 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 3.1e-07 61.2 140 31.4
Os10g0149200 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 3.1e-07 61.2 140 31.4
Os10g0150700 Oryza sativa ssp. japonica HOM05D003311 ORTHO05D003707 4.1e-07 60.8 148 31.1
QL04p095545 Quercus lobata HOM05D003311 ORTHO05D003707 5.3e-07 60.5 81 34.6
Zm00001eb010490 Zea mays HOM05D003311 ORTHO05D003707 1.2e-06 59.3 195 27.2


User provided reference genes

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