Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010050.1 Olea europaea HOM05D000375 ORTHO05D000240 1.1e-51 206.5 110 100.0
Oeu055177.1 Olea europaea HOM05D000375 ORTHO05D000240 1.2e-18 96.7 77 72.7
Oeu041321.1 Olea europaea HOM05D000375 ORTHO05D000240 2.0e-13 79.3 66 72.7
SalBow6G6588 Salvia bowleyana HOM05D000375 ORTHO05D000240 7.8e-10 67.4 49 69.4
Oeu049604.1 Olea europaea HOM05D000375 ORTHO05D000240 1.3e-09 66.6 86 46.5
Actinidia08689 Actinidia chinensis HOM05D000375 ORTHO05D000240 1.5e-08 63.2 48 62.5
Nitab4.5_0006389g0010 Nicotiana tabacum HOM05D000375 ORTHO05D000240 1.5e-08 63.2 47 63.8
Gohir.A12G240900 Gossypium hirsutum HOM05D000375 ORTHO05D000240 1.9e-08 62.8 64 56.2
Nitab4.5_0000319g0230 Nicotiana tabacum HOM05D000375 ORTHO05D000240 1.9e-08 62.8 47 63.8
Aqoxy7G00974 Aquilegia oxysepala HOM05D000375 ORTHO05D000240 5.6e-08 61.2 73 49.3
CiPaw.06G042100 Carya illinoinensis HOM05D000375 ORTHO05D000240 5.6e-08 61.2 51 56.9
Duzib205G0789 Durio zibethinus HOM05D000375 ORTHO05D000240 5.6e-08 61.2 74 50.0
SGA_v2.0_scaffold18G08458 Striga asiatica HOM05D000375 ORTHO05D000240 5.6e-08 61.2 42 69.0
Thecc.03G219200 Theobroma cacao HOM05D000375 ORTHO05D000240 5.6e-08 61.2 60 55.0
Gohir.D12G242200 Gossypium hirsutum HOM05D000375 ORTHO05D000240 7.3e-08 60.8 64 54.7
Gorai.008G259500 Gossypium raimondii HOM05D000375 ORTHO05D000240 7.3e-08 60.8 64 54.7
Solyc03g082430.1 Solanum lycopersicum HOM05D000375 ORTHO05D000240 7.3e-08 60.8 52 61.5
Sopen03g022150 Solanum pennellii HOM05D000375 ORTHO05D000240 7.3e-08 60.8 52 61.5
PGSC0003DMG400003220 Solanum tuberosum HOM05D000375 ORTHO05D000240 7.3e-08 60.8 52 61.5
MSTRG.26986 Avicennia marina HOM05D000375 ORTHO05D000240 9.6e-08 60.5 70 47.1
Lj1g0010685 Lotus japonicus HOM05D000375 ORTHO05D000240 9.6e-08 60.5 54 57.4
Manes.01G041800 Manihot esculenta HOM05D000375 ORTHO05D000240 1.3e-07 60.1 53 58.5
Rhsim03G0214300 Rhododendron simsii HOM05D000375 ORTHO05D000240 1.3e-07 60.1 40 72.5
Oeu028440.1 Olea europaea HOM05D000375 ORTHO05D000240 1.6e-07 59.7 91 41.8
CAN.G303.7 Capsicum annuum HOM05D000375 ORTHO05D000240 2.1e-07 59.3 46 63.0
Lalb_Chr11g0067311 Lupinus albus HOM05D000375 ORTHO05D000240 2.1e-07 59.3 50 58.0
QL09p007351 Quercus lobata HOM05D000375 ORTHO05D000240 2.1e-07 59.3 46 63.0
THA.LOC104799945 Tarenaya hassleriana HOM05D000375 ORTHO05D000240 2.1e-07 59.3 39 71.8
Potri.012G022600 Populus trichocarpa HOM05D000375 ORTHO05D000240 2.8e-07 58.9 49 59.2
Atru.chr9.1853 Acer truncatum HOM05D000375 ORTHO05D000240 3.6e-07 58.5 77 45.5
Ca_16761_v3 Cicer arietinum L. HOM05D000375 ORTHO05D000240 3.6e-07 58.5 46 58.7
Phvul.009G047000 Phaseolus vulgaris HOM05D000375 ORTHO05D000240 3.6e-07 58.5 56 55.4
VMungo1309G0553 Vigna mungo HOM05D000375 ORTHO05D000240 3.6e-07 58.5 56 55.4
COL.COLO4_10813 Corchorus olitorius HOM05D000375 ORTHO05D000240 4.8e-07 58.2 66 53.0
ECA246G2646 Erigeron canadensis HOM05D000375 ORTHO05D000240 4.8e-07 58.2 48 60.4
Migut.F00160 Erythranthe guttata HOM05D000375 ORTHO05D000240 4.8e-07 58.2 44 68.2
Lj1C1027T4 Lonicera japonica HOM05D000375 ORTHO05D000240 4.8e-07 58.2 51 58.8
Sabra12G0011200 Salix brachista HOM05D000375 ORTHO05D000240 4.8e-07 58.2 50 56.0
Sabra14G0051000 Salix brachista HOM05D000375 ORTHO05D000240 4.8e-07 58.2 52 55.8
Hund21045 Selenicereus undatus HOM05D000375 ORTHO05D000240 4.8e-07 58.2 40 67.5
SEGI_39841 Sequoiadendron giganteum HOM05D000375 ORTHO05D000240 4.8e-07 58.2 47 59.6
Cfa016174 Carpinus fangiana HOM05D000375 ORTHO05D000240 6.2e-07 57.8 49 61.2
Cc02_g00930 Coffea canephora HOM05D000375 ORTHO05D000240 6.2e-07 57.8 39 69.2
Haze_00280 Corylus avellana HOM05D000375 ORTHO05D000240 6.2e-07 57.8 49 61.2
Dinv29221 Davidia involucrata HOM05D000375 ORTHO05D000240 6.2e-07 57.8 55 60.0
Lsat_1_v5_gn_2_135541 Lactuca sativa HOM05D000375 ORTHO05D000240 6.2e-07 57.8 50 60.0
GSVIVG01019667001 Vitis vinifera HOM05D000375 ORTHO05D000240 6.2e-07 57.8 47 59.6
Aa31LG3G9790 Aethionema arabicum HOM05D000375 ORTHO05D000240 8.1e-07 57.4 51 58.8
arahy.Tifrunner.gnm1.ann1.95DHJ9 Arachis hypogaea HOM05D000375 ORTHO05D000240 8.1e-07 57.4 42 61.9
A02p10920 Brassica napus HOM05D000375 ORTHO05D000240 8.1e-07 57.4 62 50.0
Carub.0008s1400 Capsella rubella HOM05D000375 ORTHO05D000240 8.1e-07 57.4 71 47.9
vmacro06429 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 8.1e-07 57.4 40 70.0
Atru.chr9.1484 Acer truncatum HOM05D000375 ORTHO05D000240 1.1e-06 57.0 39 66.7
C02p18120 Brassica napus HOM05D000375 ORTHO05D000240 1.1e-06 57.0 62 48.4
Carub.0007s1695 Capsella rubella HOM05D000375 ORTHO05D000240 1.1e-06 57.0 54 57.4
Ciclev10019828m.g Citrus clementina HOM05D000375 ORTHO05D000240 1.1e-06 57.0 47 61.7
Haze_09014 Corylus avellana HOM05D000375 ORTHO05D000240 1.1e-06 57.0 69 47.8
Dinv35375 Davidia involucrata HOM05D000375 ORTHO05D000240 1.1e-06 57.0 47 59.6
Peaxi162Scf00300g00828 Petunia axillaris HOM05D000375 ORTHO05D000240 1.1e-06 57.0 50 58.0
PGR031G1212 Punica granatum HOM05D000375 ORTHO05D000240 1.1e-06 57.0 52 59.6
TWI15G0310 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 1.1e-06 57.0 49 59.2
TWI39G0606 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 1.1e-06 57.0 68 48.5
GSVIVG01038629001 Vitis vinifera HOM05D000375 ORTHO05D000240 1.1e-06 57.0 51 54.9
BolC2t07943H Brassica oleracea HOM05D000375 ORTHO05D000240 1.4e-06 56.6 62 48.4
Cpa.g.sc3.145 Carica papaya HOM05D000375 ORTHO05D000240 1.4e-06 56.6 49 59.2
Duzib084G1440 Durio zibethinus HOM05D000375 ORTHO05D000240 1.4e-06 56.6 60 51.7
QL12p015939 Quercus lobata HOM05D000375 ORTHO05D000240 1.4e-06 56.6 39 66.7
Sp7g22110 Schrenkiella parvula HOM05D000375 ORTHO05D000240 1.4e-06 56.6 42 66.7
unitig_0.g2446 Utricularia gibba HOM05D000375 ORTHO05D000240 1.4e-06 56.6 43 65.1
CiPaw.11G111100 Carya illinoinensis HOM05D000375 ORTHO05D000240 1.8e-06 56.2 51 54.9
Ciclev10019529m.g Citrus clementina HOM05D000375 ORTHO05D000240 1.8e-06 56.2 53 58.5
FAN03G1345 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.8e-06 56.2 40 67.5
FAN03G1521 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.8e-06 56.2 40 67.5
FAN03G2868 Fragaria x ananassa HOM05D000375 ORTHO05D000240 1.8e-06 56.2 40 67.5
Prupe.5G131600 Prunus persica HOM05D000375 ORTHO05D000240 1.8e-06 56.2 47 61.7
RcHm_v2.0_Chr1g0382681 Rosa chinensis HOM05D000375 ORTHO05D000240 1.8e-06 56.2 40 65.0
Aa31LG6G7410 Aethionema arabicum HOM05D000375 ORTHO05D000240 2.4e-06 55.8 42 64.3
arahy.Tifrunner.gnm1.ann1.2H34WG Arachis hypogaea HOM05D000375 ORTHO05D000240 2.4e-06 55.8 52 50.0
CANSAT21G0845 Cannabis sativa HOM05D000375 ORTHO05D000240 2.4e-06 55.8 47 57.4
COL.COLO4_23825 Corchorus olitorius HOM05D000375 ORTHO05D000240 2.4e-06 55.8 39 66.7
Duzib205G0951 Durio zibethinus HOM05D000375 ORTHO05D000240 2.4e-06 55.8 68 47.1
Migut.E00302 Erythranthe guttata HOM05D000375 ORTHO05D000240 2.4e-06 55.8 46 60.9
HanXRQChr06g0166741 Helianthus annuus HOM05D000375 ORTHO05D000240 2.4e-06 55.8 47 57.4
Lsat_1_v5_gn_3_14660 Lactuca sativa HOM05D000375 ORTHO05D000240 2.4e-06 55.8 41 65.9
MD07G1297800 Malus domestica HOM05D000375 ORTHO05D000240 2.4e-06 55.8 40 67.5
Prupe.2G317500 Prunus persica HOM05D000375 ORTHO05D000240 2.4e-06 55.8 40 67.5
PGSC0003DMG400012233 Solanum tuberosum HOM05D000375 ORTHO05D000240 2.4e-06 55.8 40 67.5
THA.LOC104815306 Tarenaya hassleriana HOM05D000375 ORTHO05D000240 2.4e-06 55.8 40 65.0
Thecc.03G265600 Theobroma cacao HOM05D000375 ORTHO05D000240 2.4e-06 55.8 70 44.3
AT4G24150 Arabidopsis thaliana HOM05D000375 ORTHO05D000240 3.1e-06 55.5 46 65.2
BraA02t06157Z Brassica rapa HOM05D000375 ORTHO05D000240 3.1e-06 55.5 62 48.4
COL.COLO4_14355 Corchorus olitorius HOM05D000375 ORTHO05D000240 3.1e-06 55.5 42 61.9
FvH4_7g32780 Fragaria vesca HOM05D000375 ORTHO05D000240 3.1e-06 55.5 40 65.0
FAN01G1108 Fragaria x ananassa HOM05D000375 ORTHO05D000240 3.1e-06 55.5 40 65.0
FAN10G2746 Fragaria x ananassa HOM05D000375 ORTHO05D000240 3.1e-06 55.5 40 65.0
Lalb_Chr23g0271871 Lupinus albus HOM05D000375 ORTHO05D000240 3.1e-06 55.5 50 56.0
TAR629G0608 Trochodendron aralioides HOM05D000375 ORTHO05D000240 3.1e-06 55.5 49 59.2
AL7G29140 Arabidopsis lyrata HOM05D000375 ORTHO05D000240 4.0e-06 55.1 39 69.2
BcaB05g22069 Brassica carinata HOM05D000375 ORTHO05D000240 4.0e-06 55.1 58 51.7
BcaNung01120 Brassica carinata HOM05D000375 ORTHO05D000240 4.0e-06 55.1 39 71.8
BcaNung06402 Brassica carinata HOM05D000375 ORTHO05D000240 4.0e-06 55.1 49 59.2
A03p55070 Brassica napus HOM05D000375 ORTHO05D000240 4.0e-06 55.1 51 56.9
BraA03t14567Z Brassica rapa HOM05D000375 ORTHO05D000240 4.0e-06 55.1 51 56.9
CARHR231550 Cardamine hirsuta HOM05D000375 ORTHO05D000240 4.0e-06 55.1 46 60.9
Duzib084G0024 Durio zibethinus HOM05D000375 ORTHO05D000240 4.0e-06 55.1 42 61.9
Gohir.A08G175500 Gossypium hirsutum HOM05D000375 ORTHO05D000240 4.0e-06 55.1 80 38.8
Nitab4.5_0002720g0070 Nicotiana tabacum HOM05D000375 ORTHO05D000240 4.0e-06 55.1 42 61.9
Nitab4.5_0008141g0020 Nicotiana tabacum HOM05D000375 ORTHO05D000240 4.0e-06 55.1 42 61.9
Oeu013369.1 Olea europaea HOM05D000375 ORTHO05D000240 4.0e-06 55.1 42 64.3
Oeu013370.1 Olea europaea HOM05D000375 ORTHO05D000240 4.0e-06 55.1 42 64.3
Thecc.03G207100 Theobroma cacao HOM05D000375 ORTHO05D000240 4.0e-06 55.1 42 61.9
TWI14G0388 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 4.0e-06 55.1 68 45.6
arahy.Tifrunner.gnm1.ann1.MSLW3U Arachis hypogaea HOM05D000375 ORTHO05D000240 5.3e-06 54.7 43 58.1
BcaC06g33371 Brassica carinata HOM05D000375 ORTHO05D000240 5.3e-06 54.7 43 60.5
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 5.3e-06 54.7 43 60.5
C07p62620 Brassica napus HOM05D000375 ORTHO05D000240 5.3e-06 54.7 43 60.5
BolC7t46678H Brassica oleracea HOM05D000375 ORTHO05D000240 5.3e-06 54.7 43 60.5
BraA03t15606Z Brassica rapa HOM05D000375 ORTHO05D000240 5.3e-06 54.7 43 60.5
CDE04G2864 Ceratophyllum demersum HOM05D000375 ORTHO05D000240 5.3e-06 54.7 44 61.4
DCAR_020360 Daucus carota HOM05D000375 ORTHO05D000240 5.3e-06 54.7 39 66.7
Sabra15G0004400 Salix brachista HOM05D000375 ORTHO05D000240 5.3e-06 54.7 67 41.8
Sp6g15780 Schrenkiella parvula HOM05D000375 ORTHO05D000240 5.3e-06 54.7 86 44.2
TWI60G1212 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 5.3e-06 54.7 49 57.1
TAR636G1213 Trochodendron aralioides HOM05D000375 ORTHO05D000240 5.3e-06 54.7 54 55.6
vmacro11496 Vaccinium macrocarpon HOM05D000375 ORTHO05D000240 5.3e-06 54.7 48 56.2
EL10Ac3g05196 Beta vulgaris HOM05D000375 ORTHO05D000240 6.9e-06 54.3 41 61.0
Thhalv10025371m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 6.9e-06 54.3 64 50.0
Gohir.A12G246800 Gossypium hirsutum HOM05D000375 ORTHO05D000240 6.9e-06 54.3 42 61.9
Gorai.008G265600 Gossypium raimondii HOM05D000375 ORTHO05D000240 6.9e-06 54.3 42 61.9
MBI12_g07777_MAGBIO Magnolia biondii HOM05D000375 ORTHO05D000240 6.9e-06 54.3 51 56.9
Peaxi162Scf00074g00155 Petunia axillaris HOM05D000375 ORTHO05D000240 6.9e-06 54.3 52 55.8
SalBow2G3136 Salvia bowleyana HOM05D000375 ORTHO05D000240 6.9e-06 54.3 71 46.5
Sed0013097 Sechium edule HOM05D000375 ORTHO05D000240 6.9e-06 54.3 87 42.5
Hund09704 Selenicereus undatus HOM05D000375 ORTHO05D000240 6.9e-06 54.3 40 62.5
Atru.chr5.330 Acer truncatum HOM05D000375 ORTHO05D000240 9.0e-06 53.9 39 64.1
AT5G53660 Arabidopsis thaliana HOM05D000375 ORTHO05D000240 9.0e-06 53.9 70 47.1
C07p53390 Brassica napus HOM05D000375 ORTHO05D000240 9.0e-06 53.9 39 69.2
BolC7t45833H Brassica oleracea HOM05D000375 ORTHO05D000240 9.0e-06 53.9 39 69.2
Thhalv10013862m.g Eutrema salsugineum HOM05D000375 ORTHO05D000240 9.0e-06 53.9 70 45.7
SEGI_28345 Sequoiadendron giganteum HOM05D000375 ORTHO05D000240 9.0e-06 53.9 51 52.9
SEGI_38542 Sequoiadendron giganteum HOM05D000375 ORTHO05D000240 9.0e-06 53.9 51 52.9
TWI23G0929 Tripterygium wilfordii HOM05D000375 ORTHO05D000240 9.0e-06 53.9 68 48.5


User provided reference genes

Program Settings