Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu010029.1 Olea europaea HOM05D005699 ORTHO05D007496 5.4e-148 527.7 281 100.0
Dinv13365 Davidia involucrata HOM05D005699 ORTHO05D007496 3.9e-122 441.8 272 85.7
Hma1.2p1_0050F.1_g028850 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 1.5e-121 439.9 272 83.8
Migut.M00694 Erythranthe guttata HOM05D005699 ORTHO05D007496 3.3e-121 438.7 278 82.0
CSS0029451 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 8.2e-120 434.1 276 81.9
EL10Ac4g08415 Beta vulgaris HOM05D005699 ORTHO05D007496 1.2e-118 430.3 257 86.4
ECA240G3195 Erigeron canadensis HOM05D005699 ORTHO05D007496 4.5e-118 428.3 265 82.3
Nitab4.5_0000347g0060 Nicotiana tabacum HOM05D005699 ORTHO05D007496 5.8e-118 427.9 277 80.9
CSS0007542 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 7.6e-118 427.6 282 80.5
SGA_v2.0_scaffold73G24389 Striga asiatica HOM05D005699 ORTHO05D007496 1.3e-117 426.8 300 76.0
Potri.001G384300 Populus trichocarpa HOM05D005699 ORTHO05D007496 1.7e-117 426.4 264 82.6
Atru.chr2.2008 Acer truncatum HOM05D005699 ORTHO05D007496 2.9e-117 425.6 259 83.0
MSTRG.6687 Avicennia marina HOM05D005699 ORTHO05D007496 4.2e-116 421.8 277 78.3
Cc05_g10740 Coffea canephora HOM05D005699 ORTHO05D007496 4.2e-116 421.8 272 83.1
Lj8A146G72 Lonicera japonica HOM05D005699 ORTHO05D007496 5.5e-116 421.4 275 81.1
Lj1A824T64 Lonicera japonica HOM05D005699 ORTHO05D007496 7.1e-116 421.0 272 79.8
Ciclev10021126m.g Citrus clementina HOM05D005699 ORTHO05D007496 9.3e-116 420.6 269 82.2
Manes.15G097700 Manihot esculenta HOM05D005699 ORTHO05D007496 9.3e-116 420.6 261 83.1
Actinidia12601 Actinidia chinensis HOM05D005699 ORTHO05D007496 1.6e-115 419.9 273 81.0
SalBow7G3647 Salvia bowleyana HOM05D005699 ORTHO05D007496 1.6e-115 419.9 264 81.8
Solyc07g062180.4 Solanum lycopersicum HOM05D005699 ORTHO05D007496 3.5e-115 418.7 274 80.3
Peaxi162Scf00111g01334 Petunia axillaris HOM05D005699 ORTHO05D007496 4.6e-115 418.3 272 82.0
TAR629G2232 Trochodendron aralioides HOM05D005699 ORTHO05D007496 6.0e-115 417.9 254 83.1
PGR083G0120 Punica granatum HOM05D005699 ORTHO05D007496 7.9e-115 417.5 261 80.8
CiPaw.12G110500 Carya illinoinensis HOM05D005699 ORTHO05D007496 1.0e-114 417.2 261 80.8
DCAR_013779 Daucus carota HOM05D005699 ORTHO05D007496 1.0e-114 417.2 276 78.3
Sabra11G0080500 Salix brachista HOM05D005699 ORTHO05D007496 3.0e-114 415.6 260 81.9
COL.COLO4_17478 Corchorus olitorius HOM05D005699 ORTHO05D007496 3.9e-114 415.2 263 82.9
Potri.011G105700 Populus trichocarpa HOM05D005699 ORTHO05D007496 6.7e-114 414.5 260 81.9
FAN11G1539 Fragaria x ananassa HOM05D005699 ORTHO05D007496 8.7e-114 414.1 261 80.8
Aqoxy1G01911 Aquilegia oxysepala HOM05D005699 ORTHO05D007496 1.1e-113 413.7 255 82.0
HanXRQChr14g0439361 Helianthus annuus HOM05D005699 ORTHO05D007496 1.1e-113 413.7 276 77.9
MD11G1269700 Malus domestica HOM05D005699 ORTHO05D007496 1.5e-113 413.3 262 79.8
RcHm_v2.0_Chr5g0029561 Rosa chinensis HOM05D005699 ORTHO05D007496 1.5e-113 413.3 261 80.8
MSTRG.14252 Avicennia marina HOM05D005699 ORTHO05D007496 1.9e-113 412.9 276 80.1
Cfa019514 Carpinus fangiana HOM05D005699 ORTHO05D007496 2.5e-113 412.5 261 79.7
HanXRQChr13g0389711 Helianthus annuus HOM05D005699 ORTHO05D007496 2.5e-113 412.5 260 80.4
FAN16G3421 Fragaria x ananassa HOM05D005699 ORTHO05D007496 4.3e-113 411.8 261 80.5
FAN21G2533 Fragaria x ananassa HOM05D005699 ORTHO05D007496 5.7e-113 411.4 261 80.1
Lalb_Chr20g0109131 Lupinus albus HOM05D005699 ORTHO05D007496 7.4e-113 411.0 258 81.8
Nn3g21006 Nelumbo nucifera HOM05D005699 ORTHO05D007496 7.4e-113 411.0 257 81.3
Thecc.07G132200 Theobroma cacao HOM05D005699 ORTHO05D007496 7.4e-113 411.0 260 83.1
TWI39G0441 Tripterygium wilfordii HOM05D005699 ORTHO05D007496 7.4e-113 411.0 263 77.2
Glyma.12G233800 Glycine max HOM05D005699 ORTHO05D007496 9.6e-113 410.6 251 84.5
Gorai.007G331300 Gossypium raimondii HOM05D005699 ORTHO05D007496 9.6e-113 410.6 261 80.8
MD03G1247900 Malus domestica HOM05D005699 ORTHO05D007496 9.6e-113 410.6 261 80.1
AUR62019646 Chenopodium quinoa HOM05D005699 ORTHO05D007496 1.6e-112 409.8 257 81.7
FAN25G0494 Fragaria x ananassa HOM05D005699 ORTHO05D007496 1.6e-112 409.8 261 79.7
Cpa.g.sc77.58 Carica papaya HOM05D005699 ORTHO05D007496 2.1e-112 409.5 257 81.7
Gohir.D11G303400 Gossypium hirsutum HOM05D005699 ORTHO05D007496 2.8e-112 409.1 261 80.5
GSVIVG01014100001 Vitis vinifera HOM05D005699 ORTHO05D007496 2.8e-112 409.1 256 82.4
Ah.04g164050 Amaranthus hybridus HOM05D005699 ORTHO05D007496 3.7e-112 408.7 260 78.8
CAN.G375.48 Capsicum annuum HOM05D005699 ORTHO05D007496 3.7e-112 408.7 273 78.8
Glyma.13G265200 Glycine max HOM05D005699 ORTHO05D007496 3.7e-112 408.7 257 82.5
MBI06_g08519_MAGBIO Magnolia biondii HOM05D005699 ORTHO05D007496 3.7e-112 408.7 258 80.2
Prupe.4G156800 Prunus persica HOM05D005699 ORTHO05D007496 3.7e-112 408.7 261 80.8
Rhsim06G0211500 Rhododendron simsii HOM05D005699 ORTHO05D007496 4.8e-112 408.3 281 78.6
Gohir.A11G289100 Gossypium hirsutum HOM05D005699 ORTHO05D007496 6.3e-112 407.9 261 80.8
Nitab4.5_0003230g0020 Nicotiana tabacum HOM05D005699 ORTHO05D007496 6.3e-112 407.9 319 71.8
CSS0028539 Camellia sinensis var. sinensis HOM05D005699 ORTHO05D007496 1.1e-111 407.1 301 74.8
DCAR_019613 Daucus carota HOM05D005699 ORTHO05D007496 4.1e-111 405.2 265 79.2
PSO541G1284 Papaver somniferum HOM05D005699 ORTHO05D007496 6.9e-111 404.4 277 74.4
Lj3g0018973 Lotus japonicus HOM05D005699 ORTHO05D007496 9.0e-111 404.1 258 81.8
CsaV3_4G008250 Cucumis sativus L. HOM05D005699 ORTHO05D007496 2.6e-110 402.5 259 80.3
Eucgr.F01366 Eucalyptus grandis HOM05D005699 ORTHO05D007496 4.5e-110 401.7 254 81.5
Phvul.005G076800 Phaseolus vulgaris HOM05D005699 ORTHO05D007496 4.5e-110 401.7 257 80.5
Ca_03931_v3 Cicer arietinum L. HOM05D005699 ORTHO05D007496 5.9e-110 401.4 260 79.6
Sed0019309 Sechium edule HOM05D005699 ORTHO05D007496 1.7e-109 399.8 259 78.8
arahy.Tifrunner.gnm1.ann1.EKI9R8 Arachis hypogaea HOM05D005699 ORTHO05D007496 2.9e-109 399.1 258 80.6
AUR62039586 Chenopodium quinoa HOM05D005699 ORTHO05D007496 1.1e-108 397.1 257 79.4
VMungo1080G0954 Vigna mungo HOM05D005699 ORTHO05D007496 3.2e-108 395.6 276 76.1
Haze_09244 Corylus avellana HOM05D005699 ORTHO05D007496 5.5e-108 394.8 261 78.5
Carub.0002s2547 Capsella rubella HOM05D005699 ORTHO05D007496 9.3e-108 394.0 261 75.9
AT1G78620 Arabidopsis thaliana HOM05D005699 ORTHO05D007496 1.6e-107 393.3 261 76.2
AL2G39020 Arabidopsis lyrata HOM05D005699 ORTHO05D007496 2.7e-107 392.5 261 75.9
CARHR072140 Cardamine hirsuta HOM05D005699 ORTHO05D007496 2.7e-107 392.5 261 76.2
Medtr2g073380 Medicago truncatula HOM05D005699 ORTHO05D007496 1.8e-106 389.8 258 77.9
Thhalv10018838m.g Eutrema salsugineum HOM05D005699 ORTHO05D007496 3.0e-106 389.0 270 73.3
Sp5g33710 Schrenkiella parvula HOM05D005699 ORTHO05D007496 3.0e-106 389.0 270 73.3
Aa31LG4G2340 Aethionema arabicum HOM05D005699 ORTHO05D007496 6.7e-106 387.9 261 75.9
BcaC08g47425 Brassica carinata HOM05D005699 ORTHO05D007496 6.7e-106 387.9 261 74.3
PGSC0003DMG400007091 Solanum tuberosum HOM05D005699 ORTHO05D007496 8.7e-106 387.5 333 65.5
THA.LOC104813995 Tarenaya hassleriana HOM05D005699 ORTHO05D007496 1.5e-105 386.7 258 75.6
A07p43890 Brassica napus HOM05D005699 ORTHO05D007496 1.9e-105 386.3 261 73.9
BraA07t31896Z Brassica rapa HOM05D005699 ORTHO05D007496 9.7e-105 384.0 261 73.6
C06p52520 Brassica napus HOM05D005699 ORTHO05D007496 2.8e-104 382.5 261 73.2
BcaC08g47427 Brassica carinata HOM05D005699 ORTHO05D007496 6.3e-104 381.3 261 73.2
Sabra11G0074900 Salix brachista HOM05D005699 ORTHO05D007496 1.5e-102 376.7 234 82.1
BolC6t40271H Brassica oleracea HOM05D005699 ORTHO05D007496 2.6e-102 375.9 271 70.8
unitig_37.g12557 Utricularia gibba HOM05D005699 ORTHO05D007496 4.5e-102 375.2 268 72.0
Lsat_1_v5_gn_9_100441 Lactuca sativa HOM05D005699 ORTHO05D007496 1.0e-101 374.0 248 77.4
SalBow4G2873 Salvia bowleyana HOM05D005699 ORTHO05D007496 2.2e-101 372.9 245 79.6
ClCG07G010100 Citrullus lanatus HOM05D005699 ORTHO05D007496 8.5e-101 370.9 323 62.8
Psat5g233280 Pisum sativum HOM05D005699 ORTHO05D007496 1.6e-99 366.7 257 72.8
QL08p037175 Quercus lobata HOM05D005699 ORTHO05D007496 7.4e-97 357.8 225 80.9
QL08p037250 Quercus lobata HOM05D005699 ORTHO05D007496 7.4e-97 357.8 225 80.9
Os01g0729100 Oryza sativa ssp. japonica HOM05D005699 ORTHO05D007496 8.2e-96 354.4 254 71.3
unitig_746.g26834 Utricularia gibba HOM05D005699 ORTHO05D007496 4.1e-95 352.1 264 66.7
ATR0213G027 Amborella trichopoda HOM05D005699 ORTHO05D007496 1.7e-93 346.7 224 77.7
TPR.G13095 Trifolium pratense HOM05D005699 ORTHO05D007496 5.7e-89 331.6 401 50.6
Hma1.2p1_0050F.1_g028840 Hydrangea macrophylla HOM05D005699 ORTHO05D007496 7.4e-89 331.3 206 83.5
Manes.03G092700 Manihot esculenta HOM05D005699 ORTHO05D007496 7.4e-89 331.3 195 87.2
FvH4_3g17770 Fragaria vesca HOM05D005699 ORTHO05D007496 8.5e-85 317.8 199 80.9
AagrBONN_evm.TU.Sc2ySwM_228.4605 Anthoceros agrestis HOM05D005699 ORTHO05D007496 4.7e-83 312.0 239 64.0
MELO3C016111.2 Cucumis melo HOM05D005699 ORTHO05D007496 2.6e-81 306.2 197 80.7
CiPaw.11G155600 Carya illinoinensis HOM05D005699 ORTHO05D007496 3.3e-81 305.8 196 80.1
Sc16g0007730 Simmondsia chinensis HOM05D005699 ORTHO05D007496 9.7e-81 304.3 199 79.4
Sopen07g030460 Solanum pennellii HOM05D005699 ORTHO05D007496 1.7e-77 293.5 181 84.0
Pp3c13_15320 Physcomitrium patens HOM05D005699 ORTHO05D007496 4.2e-76 288.9 246 59.3
SMO331G0093 Selaginella moellendorffii HOM05D005699 ORTHO05D007496 7.2e-76 288.1 256 59.0
CDE02G0824 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 3.0e-74 282.7 234 65.0
CBR_g26242 Chara braunii HOM05D005699 ORTHO05D007496 3.0e-74 282.7 263 56.3
Mapoly0056s0015 Marchantia polymorpha HOM05D005699 ORTHO05D007496 1.5e-73 280.4 247 54.7
SHI27569 Sapria himalayana HOM05D005699 ORTHO05D007496 2.8e-72 276.2 300 55.0
Pp3c13_3550 Physcomitrium patens HOM05D005699 ORTHO05D007496 2.0e-70 270.0 249 57.8
Actinidia37024 Actinidia chinensis HOM05D005699 ORTHO05D007496 3.4e-65 252.7 169 78.1
vmacro11968 Vaccinium macrocarpon HOM05D005699 ORTHO05D007496 3.6e-59 232.6 203 66.5
SEGI_05295 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 2.4e-55 219.9 159 69.8
Cre06.g294800 Chlamydomonas reinhardtii HOM05D005699 ORTHO05D007496 9.2e-55 218.0 242 50.0
MCO15G637 Micromonas commoda HOM05D005699 ORTHO05D007496 6.0e-54 215.3 269 46.1
Zm00001eb361870 Zea mays HOM05D005699 ORTHO05D007496 5.0e-53 212.2 146 74.0
CDE06G0498 Ceratophyllum demersum HOM05D005699 ORTHO05D007496 3.6e-51 206.1 268 46.6
HPP92_006376 Vanilla planifolia HOM05D005699 ORTHO05D007496 6.4e-48 195.3 156 67.3
PRCOL_00000954 Prasinoderma coloniale HOM05D005699 ORTHO05D007496 1.3e-45 187.6 242 45.9
Medtr7g055620 Medicago truncatula HOM05D005699 ORTHO05D007496 4.7e-27 125.9 87 74.7
Thecc.07G131400 Theobroma cacao HOM05D005699 ORTHO05D007496 4.3e-20 102.8 70 72.9
Thecc.07G131900 Theobroma cacao HOM05D005699 ORTHO05D007496 8.1e-19 98.6 81 64.2
Thecc.07G131100 Theobroma cacao HOM05D005699 ORTHO05D007496 5.8e-17 92.4 70 64.3
MELO3C029615.2 Cucumis melo HOM05D005699 ORTHO05D170539 1.1e-15 88.2 57 78.9
MELO3C032042.2 Cucumis melo HOM05D005699 ORTHO05D000044 7.1e-15 85.5 53 81.1
SEGI_06384 Sequoiadendron giganteum HOM05D005699 ORTHO05D007496 6.0e-14 82.4 63 60.3
FvH4_7g00710 Fragaria vesca HOM05D005699 ORTHO05D046157 2.6e-09 67.0 48 60.4
FAN10G4235 Fragaria x ananassa HOM05D030717 ORTHO05D046157 9.9e-09 65.1 71 47.9
Actinidia39422 Actinidia chinensis HOM05D005699 ORTHO05D056065 1.3e-08 64.7 52 67.3
FAN06G4357 Fragaria x ananassa HOM05D023873 ORTHO05D007496 3.8e-08 63.2 40 67.5
BcaB02g07173 Brassica carinata HOM05D005699 ORTHO05D091938 1.9e-07 60.8 87 46.0


User provided reference genes

Program Settings