Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009950.2 Olea europaea HOM05D006525 ORTHO05D007845 9.1e-159 563.5 286 100.0
MSTRG.11933 Avicennia marina HOM05D006525 ORTHO05D007845 1.3e-93 347.1 286 65.0
SalBow1G4596 Salvia bowleyana HOM05D006525 ORTHO05D007845 7.6e-89 331.3 284 63.4
SalBow1G2372 Salvia bowleyana HOM05D006525 ORTHO05D007845 1.1e-87 327.4 284 62.3
Cc08_g15920 Coffea canephora HOM05D006525 ORTHO05D007845 1.0e-85 320.9 282 61.3
Dinv37543 Davidia involucrata HOM05D006525 ORTHO05D007845 2.3e-85 319.7 287 60.6
Thecc.03G295800 Theobroma cacao HOM05D006525 ORTHO05D007845 4.3e-84 315.5 286 60.1
SGA_v2.0_scaffold96G28973 Striga asiatica HOM05D006525 ORTHO05D007845 1.3e-83 313.9 328 55.5
Ciclev10022095m.g Citrus clementina HOM05D006525 ORTHO05D007845 3.6e-83 312.4 249 63.9
vmacro11437 Vaccinium macrocarpon HOM05D006525 ORTHO05D007845 3.6e-83 312.4 248 64.9
Migut.A00669 Erythranthe guttata HOM05D006525 ORTHO05D007845 1.1e-82 310.8 274 61.3
Actinidia22144 Actinidia chinensis HOM05D006525 ORTHO05D007845 1.8e-82 310.1 240 67.1
Prupe.5G117200 Prunus persica HOM05D006525 ORTHO05D007845 4.0e-82 308.9 284 58.8
Atru.chr9.2016 Acer truncatum HOM05D006525 ORTHO05D007845 6.9e-82 308.1 234 67.5
DCAR_027712 Daucus carota HOM05D006525 ORTHO05D007845 1.2e-81 307.4 286 59.8
GSVIVG01019512001 Vitis vinifera HOM05D006525 ORTHO05D007845 1.2e-81 307.4 237 66.2
FAN13G2324 Fragaria x ananassa HOM05D006525 ORTHO05D007845 1.5e-81 307.0 237 65.8
QL02p030956 Quercus lobata HOM05D006525 ORTHO05D007845 1.5e-81 307.0 232 67.7
Rhsim02G0241900 Rhododendron simsii HOM05D006525 ORTHO05D007845 2.0e-81 306.6 233 67.4
CANSAT21G0126 Cannabis sativa HOM05D006525 ORTHO05D007845 3.4e-81 305.8 288 57.6
CSS0006968 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 5.8e-81 305.1 236 67.8
CiPaw.11G122700 Carya illinoinensis HOM05D006525 ORTHO05D007845 5.8e-81 305.1 237 65.8
Cpa.g.sc79.53 Carica papaya HOM05D006525 ORTHO05D007845 9.9e-81 304.3 229 67.7
Duzib068G0461 Durio zibethinus HOM05D006525 ORTHO05D007845 9.9e-81 304.3 287 57.8
Haze_08630 Corylus avellana HOM05D006525 ORTHO05D007845 2.9e-80 302.8 272 58.1
FAN18G4350 Fragaria x ananassa HOM05D006525 ORTHO05D007845 2.9e-80 302.8 288 56.6
Aqoxy5G04177 Aquilegia oxysepala HOM05D006525 ORTHO05D007845 4.9e-80 302.0 284 55.6
PGSC0003DMG400012159 Solanum tuberosum HOM05D006525 ORTHO05D007845 6.4e-80 301.6 284 58.5
Hma1.2p1_0359F.1_g135310 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 1.4e-79 300.4 280 58.6
Cfa022937 Carpinus fangiana HOM05D006525 ORTHO05D007845 3.2e-79 299.3 236 64.8
Sopen08g030430 Solanum pennellii HOM05D006525 ORTHO05D007845 4.2e-79 298.9 284 58.1
PGR031G0465 Punica granatum HOM05D006525 ORTHO05D007845 5.4e-79 298.5 229 65.9
FAN08G2482 Fragaria x ananassa HOM05D000027 ORTHO05D007845 9.3e-79 297.7 236 63.6
Gorai.007G025600 Gossypium raimondii HOM05D006525 ORTHO05D007845 1.6e-78 297.0 252 59.9
Lj4g0012415 Lotus japonicus HOM05D006525 ORTHO05D007845 2.1e-78 296.6 234 64.1
AUR62019825 Chenopodium quinoa HOM05D006525 ORTHO05D007845 2.7e-78 296.2 244 61.1
RcHm_v2.0_Chr7g0195151 Rosa chinensis HOM05D006525 ORTHO05D007845 2.7e-78 296.2 237 63.7
Hund11396 Selenicereus undatus HOM05D006525 ORTHO05D007845 2.7e-78 296.2 231 64.5
EL10Ac5g12902 Beta vulgaris HOM05D006525 ORTHO05D007845 3.5e-78 295.8 235 61.7
MD14G1123300 Malus domestica HOM05D006525 ORTHO05D007845 6.0e-78 295.0 237 62.4
Gohir.D11G024000 Gossypium hirsutum HOM05D006525 ORTHO05D007845 7.9e-78 294.7 252 59.5
THA.LOC104817658 Tarenaya hassleriana HOM05D006525 ORTHO05D007845 1.0e-77 294.3 286 55.9
TWI15G0402 Tripterygium wilfordii HOM05D006525 ORTHO05D007845 3.0e-77 292.7 286 56.6
Medtr8g099380 Medicago truncatula HOM05D006525 ORTHO05D007845 6.6e-77 291.6 237 62.4
TAR636G1454 Trochodendron aralioides HOM05D006525 ORTHO05D007845 6.6e-77 291.6 177 79.1
Potri.001G092800 Populus trichocarpa HOM05D006525 ORTHO05D007845 8.7e-77 291.2 237 64.6
Sabra01G0069100 Salix brachista HOM05D006525 ORTHO05D007845 7.4e-76 288.1 229 65.5
Eucgr.D01725 Eucalyptus grandis HOM05D006525 ORTHO05D007845 1.3e-75 287.3 237 64.1
Manes.01G047000 Manihot esculenta HOM05D006525 ORTHO05D007845 1.3e-75 287.3 226 64.2
Gohir.A11G024300 Gossypium hirsutum HOM05D006525 ORTHO05D007845 1.6e-75 287.0 241 61.4
MBI07_g34229_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 8.1e-75 284.6 237 62.4
unitig_88.g27636 Utricularia gibba HOM05D006525 ORTHO05D007845 1.4e-74 283.9 285 54.4
Psat7g027440 Pisum sativum HOM05D006525 ORTHO05D007845 1.8e-74 283.5 237 60.8
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 2.4e-74 283.1 257 58.0
Ca_17485_v3 Cicer arietinum L. HOM05D006525 ORTHO05D007845 3.1e-74 282.7 234 61.5
ClCG01G001950 Citrullus lanatus HOM05D006525 ORTHO05D007845 4.0e-74 282.3 282 54.6
Lalb_Chr16g0390611 Lupinus albus HOM05D006525 ORTHO05D007845 5.3e-74 282.0 247 61.5
Sp7g00260 Schrenkiella parvula HOM05D006525 ORTHO05D007845 5.3e-74 282.0 233 60.5
Phvul.002G297400 Phaseolus vulgaris HOM05D006525 ORTHO05D007845 9.0e-74 281.2 234 61.5
Sed0028109 Sechium edule HOM05D006525 ORTHO05D007845 9.0e-74 281.2 282 53.9
CAN.G532.106 Capsicum annuum HOM05D006525 ORTHO05D007845 1.5e-73 280.4 236 61.4
VMungo0251G1352 Vigna mungo HOM05D006525 ORTHO05D007845 1.5e-73 280.4 235 61.7
Aa31LG9G310 Aethionema arabicum HOM05D006525 ORTHO05D007845 4.5e-73 278.9 233 59.7
MBI07_g34230_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 9.9e-73 277.7 180 76.1
C06p20270 Brassica napus HOM05D006525 ORTHO05D007845 2.2e-72 276.6 252 56.0
BolC6t37207H Brassica oleracea HOM05D006525 ORTHO05D007845 2.2e-72 276.6 252 56.0
HanXRQChr13g0415031 Helianthus annuus HOM05D006525 ORTHO05D007845 2.2e-72 276.6 277 56.3
Glyma.08G022100 Glycine max HOM05D006525 ORTHO05D007845 2.9e-72 276.2 234 61.5
BraA07t29782Z Brassica rapa HOM05D006525 ORTHO05D007845 4.9e-72 275.4 277 52.3
A07p20960 Brassica napus HOM05D006525 ORTHO05D007845 6.4e-72 275.0 277 52.3
MELO3C005745.2 Cucumis melo HOM05D006525 ORTHO05D007845 6.4e-72 275.0 282 53.9
arahy.Tifrunner.gnm1.ann1.3UM0RM Arachis hypogaea HOM05D006525 ORTHO05D007845 8.4e-72 274.6 239 61.5
Os05g0214400 Oryza sativa ssp. japonica HOM05D006525 ORTHO05D007845 8.4e-72 274.6 232 58.6
CsaV3_5G002090 Cucumis sativus L. HOM05D006525 ORTHO05D007845 1.1e-71 274.2 282 53.9
BcaC08g44560 Brassica carinata HOM05D006525 ORTHO05D007845 4.2e-71 272.3 252 55.6
Carub.0007s3351 Capsella rubella HOM05D006525 ORTHO05D007845 7.1e-71 271.6 237 59.5
HanXRQChr17g0535171 Helianthus annuus HOM05D006525 ORTHO05D007845 3.5e-70 269.2 236 58.5
BcaB02g07875 Brassica carinata HOM05D006525 ORTHO05D007845 7.9e-70 268.1 277 52.3
CARHR212710 Cardamine hirsuta HOM05D006525 ORTHO05D007845 7.9e-70 268.1 236 57.6
AL7G47380 Arabidopsis lyrata HOM05D006525 ORTHO05D007845 1.3e-69 267.3 234 58.1
arahy.Tifrunner.gnm1.ann1.56CREW Arachis hypogaea HOM05D006525 ORTHO05D007845 3.0e-69 266.2 249 59.0
HPP92_000617 Vanilla planifolia HOM05D006525 ORTHO05D007845 3.9e-69 265.8 275 52.7
ECA240G1071 Erigeron canadensis HOM05D006525 ORTHO05D007845 6.7e-69 265.0 249 57.0
AT5G41850 Arabidopsis thaliana HOM05D006525 ORTHO05D007845 3.3e-68 262.7 234 57.3
ECA246G0134 Erigeron canadensis HOM05D006525 ORTHO05D007845 7.4e-68 261.5 235 55.7
PSO384G4490 Papaver somniferum HOM05D006525 ORTHO05D007845 7.4e-68 261.5 234 58.5
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 9.6e-68 261.2 234 57.7
Nitab4.5_0010144g0010 Nicotiana tabacum HOM05D006525 ORTHO05D007845 1.8e-66 256.9 176 72.2
Zm00001eb283820 Zea mays HOM05D006525 ORTHO05D007845 1.5e-65 253.8 234 55.6
Nitab4.5_0000223g0360 Nicotiana tabacum HOM05D006525 ORTHO05D007845 5.8e-65 251.9 176 70.5
PSO339G1283 Papaver somniferum HOM05D006525 ORTHO05D007845 3.8e-64 249.2 283 50.5
AUR62010826 Chenopodium quinoa HOM05D006525 ORTHO05D007845 1.4e-63 247.3 238 55.9
Lsat_1_v5_gn_6_84361 Lactuca sativa HOM05D006525 ORTHO05D007845 3.2e-63 246.1 180 67.8
Thhalv10028271m.g Eutrema salsugineum HOM05D006525 ORTHO05D007845 5.5e-63 245.4 232 55.2
Lsat_1_v5_gn_3_10281 Lactuca sativa HOM05D006525 ORTHO05D007845 9.3e-63 244.6 275 51.6
HanXRQChr06g0166551 Helianthus annuus HOM05D006525 ORTHO05D007845 3.9e-61 239.2 249 53.4
Lj2A170G33 Lonicera japonica HOM05D006525 ORTHO05D007845 3.9e-61 239.2 156 75.6
SMO290G0001 Selaginella moellendorffii HOM05D006525 ORTHO05D007845 2.5e-60 236.5 236 53.0
Nn3g19049 Nelumbo nucifera HOM05D006525 ORTHO05D007845 1.6e-51 207.2 174 62.6
TPR.G3436 Trifolium pratense HOM05D006525 ORTHO05D007845 1.8e-50 203.8 170 61.2
MBI07_g27263_MAGBIO Magnolia biondii HOM05D006525 ORTHO05D007845 6.9e-50 201.8 182 59.9
CBR_g29721 Chara braunii HOM05D006525 ORTHO05D007845 6.5e-48 195.3 233 42.9
Pp3c22_1320 Physcomitrium patens HOM05D006525 ORTHO05D007845 8.2e-43 178.3 197 48.7
Hma1.2p1_0359F.1_g135320 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 6.9e-42 175.3 112 76.8
FvH4_5g04410 Fragaria vesca HOM05D006525 ORTHO05D007845 5.9e-41 172.2 194 50.0
CSS0025848 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 7.7e-41 171.8 146 61.6
Sc22g0005060 Simmondsia chinensis HOM05D006525 ORTHO05D007845 2.3e-37 160.2 183 51.9
Glyma.05G216200 Glycine max HOM05D006525 ORTHO05D007845 5.3e-34 149.1 112 68.8
Solyc08g082150.2 Solanum lycopersicum HOM05D006525 ORTHO05D007845 7.0e-34 148.7 168 50.6
CSS0015265 Camellia sinensis var. sinensis HOM05D006525 ORTHO05D007845 9.4e-31 138.3 108 67.6
Hma1.2p1_0359F.1_g135300 Hydrangea macrophylla HOM05D006525 ORTHO05D007845 5.2e-29 132.5 169 46.7
Peaxi162Scf00074g01026 Petunia axillaris HOM05D006525 ORTHO05D007845 1.1e-26 124.8 168 47.0
SEGI_26681 Sequoiadendron giganteum HOM05D006525 ORTHO05D007845 5.3e-26 122.5 87 69.0
BcaNung06853 Brassica carinata HOM05D006525 ORTHO05D007845 2.7e-25 120.2 82 70.7
Pp3c22_17300 Physcomitrium patens HOM05D006525 ORTHO05D007845 2.5e-23 113.6 88 61.4
TPR.G20444 Trifolium pratense HOM05D006525 ORTHO05D007845 4.2e-23 112.8 85 68.2
MD06G1104500 Malus domestica HOM05D006525 ORTHO05D007845 6.1e-22 109.0 119 53.8
MD06G1104600 Malus domestica HOM05D006525 ORTHO05D007845 6.1e-22 109.0 68 72.1
ATR0589G090 Amborella trichopoda HOM05D006525 ORTHO05D007845 3.0e-21 106.7 87 60.9
AagrBONN_evm.TU.Sc2ySwM_368.643 Anthoceros agrestis HOM05D006525 ORTHO05D007845 2.8e-19 100.1 79 59.5
HanXRQChr03g0061741 Helianthus annuus HOM05D006525 ORTHO05D007845 5.4e-18 95.9 65 70.8
Sc22g0005070 Simmondsia chinensis HOM05D006525 ORTHO05D007845 3.5e-17 93.2 67 68.7
PGSC0003DMG400026824 Solanum tuberosum HOM05D006525 ORTHO05D007845 5.0e-16 89.4 72 62.5
Lalb_Chr09g0332581 Lupinus albus HOM05D006525 ORTHO05D007845 2.8e-11 73.6 51 72.5


User provided reference genes

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