Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009948.1 Olea europaea HOM05D007041 ORTHO05D008036 6.8e-54 213.8 111 100.0
TAR636G2915 Trochodendron aralioides HOM05D007041 ORTHO05D008036 2.1e-10 69.3 112 42.0
COL.COLO4_06320 Corchorus olitorius HOM05D007041 ORTHO05D008036 6.1e-10 67.8 126 34.1
MD07G1146000 Malus domestica HOM05D007041 ORTHO05D008036 7.9e-10 67.4 121 40.5
QL02p031389 Quercus lobata HOM05D007041 ORTHO05D008036 2.3e-09 65.9 112 40.2
Nn1g01816 Nelumbo nucifera HOM05D007041 ORTHO05D008036 1.1e-08 63.5 46 58.7
CiPaw.02G039100 Carya illinoinensis HOM05D007041 ORTHO05D008036 1.9e-08 62.8 81 43.2
Glyma.16G026800 Glycine max HOM05D007041 ORTHO05D008036 4.3e-08 61.6 97 40.2
Peaxi162Scf00843g00001 Petunia axillaris HOM05D007041 ORTHO05D008036 4.3e-08 61.6 109 35.8
TAR629G2489 Trochodendron aralioides HOM05D007041 ORTHO05D008036 4.3e-08 61.6 121 37.2
FAN03G1744 Fragaria x ananassa HOM05D007041 ORTHO05D008036 5.7e-08 61.2 129 39.5
Lalb_Chr17g0342361 Lupinus albus HOM05D007041 ORTHO05D008036 5.7e-08 61.2 72 47.2
Prupe.2G184300 Prunus persica HOM05D007041 ORTHO05D008036 5.7e-08 61.2 77 44.2
CSS0019600 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 7.4e-08 60.8 100 40.0
CiPaw.12G084900 Carya illinoinensis HOM05D007041 ORTHO05D008036 9.7e-08 60.5 114 36.0
Glyma.07G057800 Glycine max HOM05D007041 ORTHO05D008036 1.7e-07 59.7 98 35.7
CSS0049473 Camellia sinensis var. sinensis HOM05D007041 ORTHO05D008036 2.2e-07 59.3 107 39.3
Oeu007854.1 Olea europaea HOM05D007041 ORTHO05D008036 2.2e-07 59.3 67 44.8
RcHm_v2.0_Chr1g0358991 Rosa chinensis HOM05D007041 ORTHO05D008036 2.2e-07 59.3 123 35.0
Phvul.010G111500 Phaseolus vulgaris HOM05D007041 ORTHO05D008036 2.8e-07 58.9 48 58.3
Gohir.D08G147100 Gossypium hirsutum HOM05D007041 ORTHO05D008036 4.8e-07 58.2 42 64.3
Gorai.004G152600 Gossypium raimondii HOM05D007041 ORTHO05D008036 4.8e-07 58.2 42 64.3
CiPaw.01G073300 Carya illinoinensis HOM05D007041 ORTHO05D008036 6.3e-07 57.8 39 64.1
FvH4_7g16050 Fragaria vesca HOM05D007041 ORTHO05D008036 6.3e-07 57.8 128 39.1
Manes.05G025400 Manihot esculenta HOM05D007041 ORTHO05D008036 6.3e-07 57.8 40 60.0
FAN06G3979 Fragaria x ananassa HOM05D007041 ORTHO05D008036 8.2e-07 57.4 67 50.7
Thecc.01G346300 Theobroma cacao HOM05D007041 ORTHO05D008036 8.2e-07 57.4 87 37.9
EL10Ac1g00306 Beta vulgaris HOM05D007041 ORTHO05D008036 1.1e-06 57.0 31 71.0
Lsat_1_v5_gn_7_2180 Lactuca sativa HOM05D007041 ORTHO05D008036 1.1e-06 57.0 73 42.5
Nitab4.5_0007594g0010 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.1e-06 57.0 40 52.5
FAN10G1361 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.4e-06 56.6 128 38.3
Lj3g0003817 Lotus japonicus HOM05D007041 ORTHO05D008036 1.4e-06 56.6 97 41.2
Medtr7g117120 Medicago truncatula HOM05D007041 ORTHO05D008036 1.4e-06 56.6 104 39.4
Nitab4.5_0004161g0040 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.4e-06 56.6 94 38.3
Actinidia28494 Actinidia chinensis HOM05D000017 ORTHO05D008036 1.8e-06 56.2 97 36.1
C08p36510 Brassica napus HOM05D007041 ORTHO05D008036 1.8e-06 56.2 29 79.3
BolC8t51234H Brassica oleracea HOM05D007041 ORTHO05D008036 1.8e-06 56.2 29 79.3
CANSAT56G1227 Cannabis sativa HOM05D007041 ORTHO05D008036 1.8e-06 56.2 57 49.1
Thhalv10006386m.g Eutrema salsugineum HOM05D007041 ORTHO05D008036 1.8e-06 56.2 31 74.2
FAN10G2988 Fragaria x ananassa HOM05D007041 ORTHO05D008036 1.8e-06 56.2 128 38.3
Nitab4.5_0000223g0230 Nicotiana tabacum HOM05D007041 ORTHO05D008036 1.8e-06 56.2 98 37.8
SalBow3G2736 Salvia bowleyana HOM05D007041 ORTHO05D008036 1.8e-06 56.2 40 55.0
A09p53730 Brassica napus HOM05D007041 ORTHO05D008036 2.4e-06 55.8 46 56.5
Nitab4.5_0000305g0050 Nicotiana tabacum HOM05D007041 ORTHO05D008036 2.4e-06 55.8 40 50.0
Potri.003G137600 Populus trichocarpa HOM05D007041 ORTHO05D008036 2.4e-06 55.8 98 36.7
AL5G44060 Arabidopsis lyrata HOM05D007041 ORTHO05D008036 3.1e-06 55.5 29 79.3
AT3G61660 Arabidopsis thaliana HOM05D007041 ORTHO05D008036 3.1e-06 55.5 29 79.3
CARHR171970 Cardamine hirsuta HOM05D007041 ORTHO05D008036 3.1e-06 55.5 29 79.3
Gohir.D07G144400 Gossypium hirsutum HOM05D007041 ORTHO05D008036 3.1e-06 55.5 79 43.0
Gorai.001G156400 Gossypium raimondii HOM05D007041 ORTHO05D008036 3.1e-06 55.5 79 43.0
Lalb_Chr18g0044291 Lupinus albus HOM05D007041 ORTHO05D008036 3.1e-06 55.5 98 41.8
Sp5g01745 Schrenkiella parvula HOM05D007041 ORTHO05D008036 3.1e-06 55.5 29 79.3
BraA09t40795Z Brassica rapa HOM05D007041 ORTHO05D008036 4.1e-06 55.1 42 61.9
Carub.0005s2835 Capsella rubella HOM05D007041 ORTHO05D008036 4.1e-06 55.1 41 63.4
FAN06G2039 Fragaria x ananassa HOM05D007041 ORTHO05D008036 4.1e-06 55.1 112 40.2
Manes.02G012400 Manihot esculenta HOM05D007041 ORTHO05D008036 4.1e-06 55.1 39 61.5
Nn2g15118 Nelumbo nucifera HOM05D007041 ORTHO05D008036 4.1e-06 55.1 46 52.2
Sabra14G0070100 Salix brachista HOM05D007041 ORTHO05D008036 4.1e-06 55.1 91 37.4
Thecc.03G293400 Theobroma cacao HOM05D007041 ORTHO05D008036 4.1e-06 55.1 44 59.1
PGSC0003DMG400012302 Solanum tuberosum HOM05D007041 ORTHO05D008036 5.3e-06 54.7 101 34.7
Cpa.g.sc2382.1 Carica papaya HOM05D007041 ORTHO05D008036 6.9e-06 54.3 42 54.8
Manes.02G012350 Manihot esculenta HOM05D007041 ORTHO05D008036 6.9e-06 54.3 39 59.0
Medtr8g027305 Medicago truncatula HOM05D007041 ORTHO05D008036 6.9e-06 54.3 38 57.9
Medtr8g027905 Medicago truncatula HOM05D001941 ORTHO05D008036 6.9e-06 54.3 38 57.9
Oeu007855.1 Olea europaea HOM05D007041 ORTHO05D008036 6.9e-06 54.3 87 36.8
TPR.G7661 Trifolium pratense HOM05D007041 ORTHO05D008036 6.9e-06 54.3 108 40.7
Zm00001eb310140 Zea mays HOM05D007041 ORTHO05D008036 6.9e-06 54.3 40 47.5
Zm00001eb441140 Zea mays HOM05D007041 ORTHO05D008036 6.9e-06 54.3 40 47.5
Atru.chr5.628 Acer truncatum HOM05D007041 ORTHO05D008036 9.1e-06 53.9 87 41.4
MSTRG.13877 Avicennia marina HOM05D007041 ORTHO05D008036 9.1e-06 53.9 77 37.7
Haze_08658 Corylus avellana HOM05D007041 ORTHO05D008036 9.1e-06 53.9 94 37.2
Rhsim01G0170200 Rhododendron simsii HOM05D007041 ORTHO05D008036 9.1e-06 53.9 76 43.4
Rhsim07G0006100 Rhododendron simsii HOM05D000337 ORTHO05D000297 9.1e-06 53.9 80 40.0
Sc01g0010130 Simmondsia chinensis HOM05D007041 ORTHO05D008036 9.1e-06 53.9 35 65.7


User provided reference genes

Program Settings