Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009772.1 Olea europaea HOM05D005090 ORTHO05D006142 2.7e-89 332.0 171 100.0
Actinidia22653 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.2e-59 232.6 176 69.3
Actinidia01086 Actinidia chinensis HOM05D005090 ORTHO05D006142 2.9e-59 232.3 174 70.1
Peaxi162Scf00121g00414 Petunia axillaris HOM05D005090 ORTHO05D006142 7.1e-58 227.6 172 68.0
MSTRG.1060 Avicennia marina HOM05D005090 ORTHO05D006142 1.0e-56 223.8 174 67.2
Nitab4.5_0002548g0010 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.3e-56 223.4 179 65.4
CiPaw.15G053600 Carya illinoinensis HOM05D005090 ORTHO05D006142 1.7e-56 223.0 175 68.0
CSS0005413 Camellia sinensis var. sinensis HOM05D005090 ORTHO05D006142 2.3e-56 222.6 176 67.6
Nitab4.5_0004730g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 2.3e-56 222.6 181 65.7
Sopen04g032180 Solanum pennellii HOM05D005090 ORTHO05D006142 3.9e-56 221.9 181 62.4
PGSC0003DMG400007949 Solanum tuberosum HOM05D005090 ORTHO05D006142 6.6e-56 221.1 179 64.8
Rhsim06G0054600 Rhododendron simsii HOM05D005090 ORTHO05D006142 1.1e-55 220.3 179 65.9
FAN27G2315 Fragaria x ananassa HOM05D005090 ORTHO05D006142 1.9e-55 219.5 179 64.2
Solyc04g078600.3 Solanum lycopersicum HOM05D005090 ORTHO05D006142 1.9e-55 219.5 185 62.2
FAN20G1047 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.3e-55 218.8 175 64.6
SalBow7G1773 Salvia bowleyana HOM05D005090 ORTHO05D006142 5.6e-55 218.0 176 64.8
Gorai.010G022500 Gossypium raimondii HOM05D005090 ORTHO05D006142 7.3e-55 217.6 177 66.7
FvH4_2g33950 Fragaria vesca HOM05D005090 ORTHO05D006142 1.2e-54 216.9 169 65.7
FAN24G0633 Fragaria x ananassa HOM05D005090 ORTHO05D006142 1.2e-54 216.9 169 65.7
Cfa009959 Carpinus fangiana HOM05D005090 ORTHO05D006142 1.6e-54 216.5 174 64.4
FAN15G0851 Fragaria x ananassa HOM05D005090 ORTHO05D006142 3.6e-54 215.3 175 64.6
Cc10_g04780 Coffea canephora HOM05D005090 ORTHO05D006142 6.2e-54 214.5 175 65.7
CAN.G1030.34 Capsicum annuum HOM05D005090 ORTHO05D006142 8.1e-54 214.2 149 70.5
TAR376G0388 Trochodendron aralioides HOM05D005090 ORTHO05D006142 8.1e-54 214.2 172 66.9
GSVIVG01009445001 Vitis vinifera HOM05D005090 ORTHO05D006142 1.1e-53 213.8 156 67.9
Gohir.D06G019036 Gossypium hirsutum HOM05D005090 ORTHO05D006142 1.8e-53 213.0 179 64.8
RcHm_v2.0_Chr6g0308461 Rosa chinensis HOM05D005090 ORTHO05D006142 4.0e-53 211.8 179 62.0
Duzib093G0455 Durio zibethinus HOM05D005090 ORTHO05D006142 2.6e-52 209.1 170 65.9
Aqoxy6G01237 Aquilegia oxysepala HOM05D005090 ORTHO05D006142 3.4e-52 208.8 151 71.5
Manes.18G040700 Manihot esculenta HOM05D005090 ORTHO05D006142 9.9e-52 207.2 167 62.9
Phvul.001G024300 Phaseolus vulgaris HOM05D005090 ORTHO05D006142 4.9e-51 204.9 174 61.5
Glyma.14G085300 Glycine max HOM05D005090 ORTHO05D006142 1.9e-50 203.0 174 60.9
VMungo0647G1453 Vigna mungo HOM05D005090 ORTHO05D006142 3.2e-50 202.2 172 61.6
Glyma.17G239400 Glycine max HOM05D005090 ORTHO05D006142 4.1e-50 201.8 171 61.4
DCAR_019423 Daucus carota HOM05D005090 ORTHO05D006142 1.2e-49 200.3 175 60.6
MD15G1077900 Malus domestica HOM05D005090 ORTHO05D006142 1.2e-49 200.3 172 63.4
Cpa.g.sc21.163 Carica papaya HOM05D005090 ORTHO05D006142 1.6e-49 199.9 175 63.4
Duzib041G0676 Durio zibethinus HOM05D005090 ORTHO05D006142 2.1e-49 199.5 168 62.5
Ciclev10002608m.g Citrus clementina HOM05D005090 ORTHO05D006142 2.7e-49 199.1 166 62.0
Lj5g0006850 Lotus japonicus HOM05D005090 ORTHO05D006142 2.7e-49 199.1 168 63.1
MD08G1095400 Malus domestica HOM05D005090 ORTHO05D006142 4.6e-49 198.4 176 60.8
Prupe.1G431400 Prunus persica HOM05D005090 ORTHO05D006142 6.0e-49 198.0 173 61.3
Lalb_Chr22g0354971 Lupinus albus HOM05D005090 ORTHO05D006142 1.0e-48 197.2 164 61.0
Ca_13273_v3 Cicer arietinum L. HOM05D005090 ORTHO05D006142 2.3e-48 196.1 167 62.3
AUR62036618 Chenopodium quinoa HOM05D005090 ORTHO05D006142 3.9e-48 195.3 156 66.0
Medtr1g018930 Medicago truncatula HOM05D005090 ORTHO05D006142 3.9e-48 195.3 165 61.2
CANSAT25G3428 Cannabis sativa HOM05D005090 ORTHO05D006142 5.1e-48 194.9 159 65.4
Potri.014G024500 Populus trichocarpa HOM05D005090 ORTHO05D006142 8.6e-48 194.1 167 63.5
TWI36G0811 Tripterygium wilfordii HOM05D005090 ORTHO05D006142 8.6e-48 194.1 178 60.1
arahy.Tifrunner.gnm1.ann1.LLUM42 Arachis hypogaea HOM05D005090 ORTHO05D006142 1.1e-47 193.7 176 57.4
arahy.Tifrunner.gnm1.ann1.Q1327U Arachis hypogaea HOM05D005090 ORTHO05D006142 1.1e-47 193.7 176 57.4
Duzib116G0889 Durio zibethinus HOM05D005090 ORTHO05D006142 1.5e-47 193.4 170 62.9
Hma1.2p1_0360F.1_g135840 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 1.5e-47 193.4 178 60.1
Atru.chr13.741 Acer truncatum HOM05D005090 ORTHO05D006142 1.9e-47 193.0 171 59.6
Sabra14G0016700 Salix brachista HOM05D005090 ORTHO05D006142 3.3e-47 192.2 152 66.4
ClCG05G020140 Citrullus lanatus HOM05D005090 ORTHO05D006142 7.3e-47 191.0 170 60.0
HanXRQChr04g0103471 Helianthus annuus HOM05D005090 ORTHO05D006142 9.6e-47 190.7 170 61.2
Hund05334 Selenicereus undatus HOM05D005090 ORTHO05D006142 9.6e-47 190.7 181 58.6
Aa31LG3G14010 Aethionema arabicum HOM05D005090 ORTHO05D006142 1.2e-46 190.3 168 58.3
PGR031G1041 Punica granatum HOM05D005090 ORTHO05D006142 1.2e-46 190.3 164 62.8
MBI16_g23060_MAGBIO Magnolia biondii HOM05D005090 ORTHO05D006142 2.8e-46 189.1 163 62.0
Nn1g04760 Nelumbo nucifera HOM05D005090 ORTHO05D006142 3.6e-46 188.7 175 58.3
Sed0001046 Sechium edule HOM05D005090 ORTHO05D006142 4.7e-46 188.3 151 63.6
Lj4C63T3 Lonicera japonica HOM05D005090 ORTHO05D006142 6.2e-46 188.0 121 76.9
PSO541G4295 Papaver somniferum HOM05D005090 ORTHO05D006142 6.2e-46 188.0 171 60.8
MELO3C016776.2 Cucumis melo HOM05D005090 ORTHO05D006142 8.1e-46 187.6 171 59.1
Nn5g30374 Nelumbo nucifera HOM05D005090 ORTHO05D006142 8.1e-46 187.6 177 59.9
Oeu037620.1 Olea europaea HOM05D005090 ORTHO05D006142 1.1e-45 187.2 120 73.3
Eucgr.F02314 Eucalyptus grandis HOM05D005090 ORTHO05D006142 1.4e-45 186.8 138 66.7
Haze_18058 Corylus avellana HOM05D005090 ORTHO05D006142 1.8e-45 186.4 239 46.0
Sc15g0005920 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.8e-45 186.4 146 67.8
Sed0019095 Sechium edule HOM05D005090 ORTHO05D006142 2.4e-45 186.0 168 58.3
CANSAT56G0556 Cannabis sativa HOM05D005090 ORTHO05D006142 3.1e-45 185.7 184 56.0
THA.LOC104807114 Tarenaya hassleriana HOM05D005090 ORTHO05D006142 3.1e-45 185.7 173 59.0
Hma1.2p1_0634F.1_g193080 Hydrangea macrophylla HOM05D005090 ORTHO05D006142 5.2e-45 184.9 176 59.1
SGA_v2.0_scaffold197G41030 Striga asiatica HOM05D005090 ORTHO05D006142 5.2e-45 184.9 229 49.8
Lsat_1_v5_gn_1_22101 Lactuca sativa HOM05D005090 ORTHO05D006142 6.8e-45 184.5 188 55.3
PSO675G4571 Papaver somniferum HOM05D005090 ORTHO05D006142 6.8e-45 184.5 171 60.2
HanXRQChr05g0150671 Helianthus annuus HOM05D005090 ORTHO05D006142 3.4e-44 182.2 165 60.0
Carub.0008s0737 Capsella rubella HOM05D005090 ORTHO05D006142 9.9e-44 180.6 173 53.8
unitig_26.g9810 Utricularia gibba HOM05D005090 ORTHO05D006142 1.7e-43 179.9 166 60.8
Potri.002G123400 Populus trichocarpa HOM05D005090 ORTHO05D006142 2.2e-43 179.5 165 59.4
Sp2g18330 Schrenkiella parvula HOM05D005090 ORTHO05D006142 4.9e-43 178.3 169 53.8
Thecc.08G002400 Theobroma cacao HOM05D005090 ORTHO05D006142 4.9e-43 178.3 168 58.3
Thhalv10005720m.g Eutrema salsugineum HOM05D005090 ORTHO05D006142 6.4e-43 177.9 169 54.4
AT5G47830 Arabidopsis thaliana HOM05D005090 ORTHO05D006142 1.1e-42 177.2 171 53.2
Haze_18064 Corylus avellana HOM05D005090 ORTHO05D006142 1.1e-42 177.2 122 68.9
COL.COLO4_10129 Corchorus olitorius HOM05D005090 ORTHO05D006142 1.4e-42 176.8 201 52.2
EL10As7g23773 Beta vulgaris HOM05D005090 ORTHO05D006142 1.9e-42 176.4 149 62.4
ECA246G0692 Erigeron canadensis HOM05D005090 ORTHO05D006142 1.9e-42 176.4 167 56.3
Psat6g014640 Pisum sativum HOM05D005090 ORTHO05D006142 2.4e-42 176.0 167 58.1
ATR0762G034 Amborella trichopoda HOM05D005090 ORTHO05D006142 3.2e-42 175.6 151 59.6
A02p37140 Brassica napus HOM05D005090 ORTHO05D006142 4.2e-42 175.3 147 59.9
BraA02t08700Z Brassica rapa HOM05D005090 ORTHO05D006142 4.2e-42 175.3 147 59.9
AL8G19800 Arabidopsis lyrata HOM05D005090 ORTHO05D006142 9.3e-42 174.1 167 56.3
C07p38740 Brassica napus HOM05D005090 ORTHO05D006142 9.3e-42 174.1 170 54.1
BolC7t44393H Brassica oleracea HOM05D005090 ORTHO05D006142 9.3e-42 174.1 170 54.1
CARHR184350 Cardamine hirsuta HOM05D005090 ORTHO05D006142 1.2e-41 173.7 169 55.0
A06p39530 Brassica napus HOM05D005090 ORTHO05D006142 1.6e-41 173.3 145 60.0
BolC2t11671H Brassica oleracea HOM05D005090 ORTHO05D006142 2.1e-41 172.9 170 54.1
BraA06t26868Z Brassica rapa HOM05D005090 ORTHO05D006142 2.1e-41 172.9 145 60.0
BcaC03g17615 Brassica carinata HOM05D005090 ORTHO05D006142 4.6e-41 171.8 169 52.7
AUR62038807 Chenopodium quinoa HOM05D005090 ORTHO05D006142 7.8e-41 171.0 155 60.6
C02p56140 Brassica napus HOM05D005090 ORTHO05D006142 1.0e-40 170.6 169 52.7
Nitab4.5_0012973g0030 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.3e-40 170.2 120 70.0
BcaB07g30052 Brassica carinata HOM05D005090 ORTHO05D006142 3.9e-40 168.7 152 56.6
ECA247G1795 Erigeron canadensis HOM05D005090 ORTHO05D006142 9.6e-39 164.1 135 63.7
Migut.C00536 Erythranthe guttata HOM05D005090 ORTHO05D006142 2.1e-38 162.9 174 55.2
Manes.05G176500 Manihot esculenta HOM05D005090 ORTHO05D006142 2.8e-38 162.5 122 66.4
CDE06G1995 Ceratophyllum demersum HOM05D005090 ORTHO05D006142 2.4e-37 159.5 138 59.4
SEGI_34157 Sequoiadendron giganteum HOM05D005090 ORTHO05D006142 2.4e-37 159.5 163 51.5
MD17G1062600 Malus domestica HOM05D005090 ORTHO05D006142 9.9e-36 154.1 134 64.9
Zm00001eb232600 Zea mays HOM05D005090 ORTHO05D006142 3.2e-34 149.1 144 54.9
Nitab4.5_0005621g0060 Nicotiana tabacum HOM05D005090 ORTHO05D006142 1.6e-33 146.7 100 71.0
Os02g0158600 Oryza sativa ssp. japonica HOM05D005090 ORTHO05D006142 4.6e-33 145.2 139 52.5
EL10As7g23770 Beta vulgaris HOM05D005090 ORTHO05D006142 1.0e-32 144.1 151 55.6
TAR628G0694 Trochodendron aralioides HOM05D005090 ORTHO05D006142 3.9e-32 142.1 115 67.0
BcaB05g23208 Brassica carinata HOM05D005090 ORTHO05D006142 5.1e-32 141.7 124 56.5
BcaB04g18280 Brassica carinata HOM05D005090 ORTHO05D006142 1.1e-31 140.6 117 58.1
vmacro04554 Vaccinium macrocarpon HOM05D005090 ORTHO05D006142 9.6e-31 137.5 255 35.3
CsaV3_4G034590 Cucumis sativus L. HOM05D005090 ORTHO05D006142 2.8e-30 136.0 171 48.0
Pp3c14_4680 Physcomitrium patens HOM05D005090 ORTHO05D006142 4.0e-29 132.1 168 42.3
Pp3c14_4740 Physcomitrium patens HOM05D005090 ORTHO05D006142 4.0e-29 132.1 168 42.3
Pp3c10_3910 Physcomitrium patens HOM05D005090 ORTHO05D006142 1.7e-27 126.7 174 42.5
EL10As7g23766 Beta vulgaris HOM05D005090 ORTHO05D006142 8.4e-27 124.4 128 57.8
EL10As7g23771 Beta vulgaris HOM05D005090 ORTHO05D006142 8.4e-27 124.4 128 57.8
AagrBONN_evm.TU.Sc2ySwM_340.334 Anthoceros agrestis HOM05D005090 ORTHO05D006142 2.4e-26 122.9 148 47.3
Mapoly0121s0046 Marchantia polymorpha HOM05D005090 ORTHO05D006142 7.1e-26 121.3 157 43.3
Sc02g0007470 Simmondsia chinensis HOM05D005090 ORTHO05D006142 1.5e-23 113.6 137 44.5
AUR62044449 Chenopodium quinoa HOM05D005090 ORTHO05D006142 5.6e-23 111.7 119 53.8
SMO140G0004 Selaginella moellendorffii HOM05D002426 ORTHO05D002873 3.7e-22 109.0 171 37.4
BcaB01g00393 Brassica carinata HOM05D005090 ORTHO05D006142 2.2e-19 99.8 103 50.5
EL10As7g23765 Beta vulgaris HOM05D005090 ORTHO05D006142 3.0e-16 89.4 115 49.6
CBR_g12766 Chara braunii HOM05D005090 ORTHO05D006142 2.8e-14 82.8 169 34.9
MD06G1210300 Malus domestica HOM05D005090 ORTHO05D006142 3.1e-13 79.3 86 51.2
BcaC02g09103 Brassica carinata HOM05D005090 ORTHO05D006142 2.9e-11 72.8 103 44.7
BcaC03g17171 Brassica carinata HOM05D005090 ORTHO05D006142 5.5e-10 68.6 100 45.0
C04p38460 Brassica napus HOM05D005090 ORTHO05D006142 5.5e-10 68.6 102 43.1
BolC2t11185H Brassica oleracea HOM05D005090 ORTHO05D006142 5.5e-10 68.6 102 44.1
BolC6t37479H Brassica oleracea HOM05D005090 ORTHO05D006142 2.7e-09 66.2 102 43.1
C02p38970 Brassica napus HOM05D005090 ORTHO05D006142 1.0e-08 64.3 98 43.9
BolC2t09908H Brassica oleracea HOM05D005090 ORTHO05D006142 1.0e-08 64.3 98 43.9
Sabra02G0096900 Salix brachista HOM05D005090 ORTHO05D006142 1.3e-08 63.9 58 60.3
Sabra02G0096800 Salix brachista HOM05D005090 ORTHO05D006142 2.8e-06 56.2 48 56.2
BcaB04g18128 Brassica carinata HOM05D005090 ORTHO05D006142 8.2e-06 54.7 52 55.8
Cre17.g717250 Chlamydomonas reinhardtii HOM05D005090 ORTHO05D006142 8.2e-06 54.7 43 51.2


User provided reference genes

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