Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 1.3e-138 496.5 282 100.0
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 9.4e-84 314.3 264 69.3
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 1.5e-81 307.0 257 71.2
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 2.0e-81 306.6 268 68.7
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 3.4e-81 305.8 259 71.4
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 5.6e-76 288.5 269 66.9
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 9.5e-76 287.7 262 65.6
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 2.1e-75 286.6 269 66.5
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.8e-75 286.2 265 67.2
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 1.4e-74 283.9 265 64.9
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 4.0e-74 282.3 263 65.4
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 8.9e-74 281.2 264 64.4
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 1.5e-73 280.4 255 69.0
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 3.4e-73 279.3 255 67.5
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 5.7e-73 278.5 265 64.2
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 1.3e-72 277.3 267 63.3
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.3e-72 277.3 267 64.0
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 2.9e-72 276.2 260 63.8
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 6.4e-72 275.0 257 65.0
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 3.2e-71 272.7 268 59.0
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 5.4e-71 271.9 262 64.1
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 7.0e-71 271.6 260 65.8
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 1.6e-70 270.4 236 68.2
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 1.0e-69 267.7 270 62.2
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 6.6e-69 265.0 263 60.8
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 6.6e-69 265.0 259 62.2
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 5.6e-68 261.9 252 65.1
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 1.2e-67 260.8 271 62.7
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.1e-67 260.0 261 62.8
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 2.8e-67 259.6 261 61.7
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 2.8e-67 259.6 267 61.4
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 6.2e-67 258.5 263 62.4
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 1.0e-66 257.7 270 60.4
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.3e-66 256.5 271 62.7
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 4.0e-66 255.8 265 62.3
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 8.9e-66 254.6 272 61.0
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 8.9e-66 254.6 257 59.5
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 1.2e-65 254.2 271 62.4
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 1.2e-65 254.2 258 60.9
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 9.8e-65 251.1 253 62.1
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 1.3e-64 250.8 259 60.2
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 2.9e-64 249.6 259 59.8
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.9e-64 249.6 281 60.9
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 2.9e-64 249.6 234 64.5
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 3.7e-64 249.2 267 59.6
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 3.7e-64 249.2 232 64.2
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 6.4e-64 248.4 281 60.5
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 6.4e-64 248.4 266 60.9
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.4e-63 247.3 264 61.4
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 1.9e-63 246.9 261 59.8
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 2.4e-63 246.5 259 58.3
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 2.0e-62 243.4 261 60.2
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 2.0e-62 243.4 255 63.1
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 2.0e-62 243.4 256 60.5
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 3.5e-62 242.7 272 57.4
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 1.0e-61 241.1 244 63.5
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 1.3e-61 240.7 261 57.9
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.7e-61 240.4 253 59.7
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.7e-61 240.4 253 61.7
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 6.6e-61 238.4 250 63.2
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 6.6e-61 238.4 261 56.7
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 1.1e-60 237.7 258 57.8
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 1.5e-60 237.3 253 60.9
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 5.6e-60 235.3 272 57.7
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 5.6e-60 235.3 254 61.0
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 2.3e-58 229.9 256 58.2
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 1.2e-57 227.6 250 57.6
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 3.4e-57 226.1 199 70.4
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 4.4e-57 225.7 231 61.9
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 5.8e-57 225.3 261 56.3
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 5.8e-57 225.3 279 52.3
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 6.4e-56 221.9 248 58.5
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 6.4e-56 221.9 230 57.8
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 1.9e-55 220.3 334 47.9
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 3.2e-55 219.5 262 53.1
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 2.7e-54 216.5 232 56.9
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.6e-54 215.7 235 60.4
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 7.8e-54 214.9 266 53.0
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 2.3e-53 213.4 286 50.3
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 5.1e-53 212.2 229 60.3
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 6.6e-53 211.8 286 50.0
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 8.6e-53 211.5 286 50.0
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 1.1e-52 211.1 220 59.1
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 7.3e-52 208.4 260 55.4
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 4.7e-51 205.7 257 52.5
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 4.7e-51 205.7 262 52.7
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 6.8e-50 201.8 166 74.7
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 8.9e-50 201.4 230 53.9
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 1.2e-49 201.1 261 51.0
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 1.5e-49 200.7 245 53.1
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 2.6e-49 199.9 262 51.5
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 7.6e-49 198.4 246 53.7
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 2.2e-48 196.8 248 50.0
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 2.2e-48 196.8 248 50.0
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 2.9e-48 196.4 250 50.8
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 6.4e-48 195.3 231 54.1
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 8.4e-48 194.9 248 49.6
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 8.4e-48 194.9 245 51.0
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 2.4e-47 193.4 250 50.4
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 2.4e-47 193.4 250 50.4
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 3.2e-47 193.0 250 50.4
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 4.1e-47 192.6 249 52.6
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 5.4e-47 192.2 245 51.0
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 9.2e-47 191.4 246 50.8
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 2.7e-46 189.9 266 47.4
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 6.0e-46 188.7 246 50.0
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 1.7e-45 187.2 281 47.7
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 8.6e-45 184.9 257 48.6
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 1.1e-44 184.5 259 48.3
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 3.3e-44 183.0 249 48.2
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 5.8e-41 172.2 127 76.4
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 1.2e-38 164.5 252 44.8
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 3.1e-34 149.8 125 68.8
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 5.3e-34 149.1 270 40.7
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 4.4e-33 146.0 169 56.2
Pp3c5_15500 Physcomitrium patens HOM05D005991 ORTHO05D007408 1.1e-26 124.8 251 38.2
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 1.5e-25 120.9 125 61.6
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 2.4e-23 113.6 159 44.0
SMO203G0019 Selaginella moellendorffii HOM05D005991 ORTHO05D007408 3.2e-23 113.2 243 37.0
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 6.7e-21 105.5 292 32.2
AagrBONN_evm.TU.Sc2ySwM_117.1275 Anthoceros agrestis HOM05D005991 ORTHO05D007408 3.3e-20 103.2 227 37.4
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.5e-17 94.4 223 39.5
MCO08G234 Micromonas commoda HOM05D005991 ORTHO05D007408 2.3e-13 80.5 160 39.4
Sabra10G0116500 Salix brachista HOM05D005991 ORTHO05D007408 7.4e-12 75.5 111 45.9
GSVIVG01017610001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.6e-09 67.0 137 41.6
PRCOL_00003370 Prasinoderma coloniale HOM05D005991 ORTHO05D007408 1.7e-08 64.3 153 39.2
GSVIVG01017622001 Vitis vinifera HOM05D005991 ORTHO05D007408 2.5e-07 60.5 68 51.5


User provided reference genes

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