Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009615.1 Olea europaea HOM05D006862 ORTHO05D008726 1.8e-145 519.2 260 100.0
MSTRG.28166 Avicennia marina HOM05D006862 ORTHO05D008726 2.2e-95 352.8 229 77.7
Migut.N01765 Erythranthe guttata HOM05D006862 ORTHO05D008726 1.3e-92 343.6 229 75.5
TAR381G1571 Trochodendron aralioides HOM05D006862 ORTHO05D008726 2.3e-92 342.8 229 75.1
Nitab4.5_0003428g0010 Nicotiana tabacum HOM05D006862 ORTHO05D008726 2.5e-91 339.3 229 75.1
Dinv32268 Davidia involucrata HOM05D006862 ORTHO05D005283 4.3e-91 338.6 229 74.2
CSS0002443 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 5.6e-91 338.2 229 75.1
QL12p036953 Quercus lobata HOM05D006862 ORTHO05D008726 4.8e-90 335.1 229 73.8
Actinidia33490 Actinidia chinensis HOM05D006862 ORTHO05D008726 6.2e-90 334.7 230 72.6
CSS0011508 Camellia sinensis var. sinensis HOM05D006862 ORTHO05D008726 8.1e-90 334.3 229 74.7
Gorai.002G140500 Gossypium raimondii HOM05D006862 ORTHO05D008726 1.1e-89 334.0 229 72.5
Gohir.A01G127200 Gossypium hirsutum HOM05D006862 ORTHO05D008726 1.8e-89 333.2 229 71.2
Nitab4.5_0000210g0120 Nicotiana tabacum HOM05D006862 ORTHO05D008726 1.8e-89 333.2 229 73.8
Thecc.08G105700 Theobroma cacao HOM05D006862 ORTHO05D008726 1.8e-89 333.2 229 73.4
Lj7A540T61 Lonicera japonica HOM05D006862 ORTHO05D008726 6.9e-89 331.3 236 70.8
Duzib093G2032 Durio zibethinus HOM05D006862 ORTHO05D008726 1.2e-88 330.5 229 72.1
Gohir.D01G114900 Gossypium hirsutum HOM05D006862 ORTHO05D008726 2.0e-88 329.7 229 72.1
Hma1.2p1_0341F.1_g130400 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 9.9e-88 327.4 229 70.7
vmacro13466 Vaccinium macrocarpon HOM05D006862 ORTHO05D008726 1.3e-87 327.0 227 72.2
GSVIVG01020916001 Vitis vinifera HOM05D006862 ORTHO05D008726 1.7e-87 326.6 246 67.5
CANSAT01G2845 Cannabis sativa HOM05D006862 ORTHO05D008726 8.4e-87 324.3 227 70.9
Manes.18G066800 Manihot esculenta HOM05D006862 ORTHO05D008726 1.4e-86 323.6 229 70.7
Sopen10g008800 Solanum pennellii HOM05D006862 ORTHO05D008726 1.9e-86 323.2 229 71.2
Glyma.09G040700 Glycine max HOM05D006862 ORTHO05D008726 5.5e-86 321.6 229 70.7
Potri.005G164300 Populus trichocarpa HOM05D006862 ORTHO05D008726 5.5e-86 321.6 229 69.9
SalBow5G3922 Salvia bowleyana HOM05D006862 ORTHO05D008726 5.5e-86 321.6 212 74.1
Glyma.15G146200 Glycine max HOM05D006862 ORTHO05D008726 1.2e-85 320.5 229 70.3
Ca_01890_v3 Cicer arietinum L. HOM05D006862 ORTHO05D008726 1.6e-85 320.1 227 71.8
CiPaw.08G045700 Carya illinoinensis HOM05D006862 ORTHO05D008726 4.6e-85 318.5 229 70.7
Cc02_g24490 Coffea canephora HOM05D006862 ORTHO05D008726 4.6e-85 318.5 227 72.2
TWI23G1270 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 4.6e-85 318.5 229 71.2
Aqoxy2G03696 Aquilegia oxysepala HOM05D006862 ORTHO05D008726 1.0e-84 317.4 229 69.4
Sc23g0003870 Simmondsia chinensis HOM05D006862 ORTHO05D008726 1.0e-84 317.4 229 68.1
DCAR_031876 Daucus carota HOM05D006862 ORTHO05D008726 1.3e-84 317.0 222 71.6
Cfa013642 Carpinus fangiana HOM05D006862 ORTHO05D008726 1.8e-84 316.6 214 72.4
ClCG08G011130 Citrullus lanatus HOM05D006862 ORTHO05D008726 3.0e-84 315.8 227 70.0
COL.COLO4_16384 Corchorus olitorius HOM05D006862 ORTHO05D008726 5.1e-84 315.1 217 73.3
Eucgr.F00331 Eucalyptus grandis HOM05D006862 ORTHO05D008726 5.1e-84 315.1 229 70.3
Sabra05G0123800 Salix brachista HOM05D006862 ORTHO05D008726 5.1e-84 315.1 229 68.1
RcHm_v2.0_Chr7g0238691 Rosa chinensis HOM05D006862 ORTHO05D008726 8.7e-84 314.3 229 68.6
EL10Ac1g01209 Beta vulgaris HOM05D006862 ORTHO05D008726 1.1e-83 313.9 229 68.1
FAN04G2864 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.1e-83 313.9 229 68.6
Nn1g05382 Nelumbo nucifera HOM05D006862 ORTHO05D008726 1.1e-83 313.9 232 68.1
FvH4_5g37140 Fragaria vesca HOM05D006862 ORTHO05D008726 1.9e-83 313.2 229 69.0
FAN13G0737 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.9e-83 313.2 229 68.1
FAN18G1242 Fragaria x ananassa HOM05D006862 ORTHO05D008726 1.9e-83 313.2 229 69.0
Sed0019597 Sechium edule HOM05D006862 ORTHO05D008726 1.9e-83 313.2 230 68.7
Prupe.1G518300 Prunus persica HOM05D006862 ORTHO05D008726 2.5e-83 312.8 229 69.0
VMungo1309G2304 Vigna mungo HOM05D006862 ORTHO05D008726 2.5e-83 312.8 231 70.1
MELO3C011029.2 Cucumis melo HOM05D006862 ORTHO05D008726 3.3e-83 312.4 230 70.0
Psat1g156880 Pisum sativum HOM05D006862 ORTHO05D008726 4.3e-83 312.0 227 69.6
Cpa.g.sc36.141 Carica papaya HOM05D006862 ORTHO05D008726 5.6e-83 311.6 227 68.7
TWI56G0923 Tripterygium wilfordii HOM05D006862 ORTHO05D008726 3.7e-82 308.9 229 69.4
Phvul.009G253100 Phaseolus vulgaris HOM05D006862 ORTHO05D008726 6.2e-82 308.1 229 68.1
SGA_v2.0_scaffold43G16518 Striga asiatica HOM05D006862 ORTHO05D008726 6.2e-82 308.1 229 68.6
AUR62027770 Chenopodium quinoa HOM05D006862 ORTHO05D008726 1.1e-81 307.4 229 65.5
CsaV3_2G029710 Cucumis sativus L. HOM05D006862 ORTHO05D008726 6.9e-81 304.7 221 70.1
Medtr2g035310 Medicago truncatula HOM05D006862 ORTHO05D008726 9.0e-81 304.3 230 66.5
PGR042G4010 Punica granatum HOM05D006862 ORTHO05D008726 9.0e-81 304.3 229 66.4
Hund16900 Selenicereus undatus HOM05D006862 ORTHO05D008726 2.0e-80 303.1 215 69.8
CAN.G1432.28 Capsicum annuum HOM05D006862 ORTHO05D008726 7.6e-80 301.2 218 70.6
Ciclev10002323m.g Citrus clementina HOM05D006862 ORTHO05D008726 2.2e-79 299.7 229 65.5
Lalb_Chr18g0059041 Lupinus albus HOM05D006862 ORTHO05D008726 3.8e-79 298.9 229 65.5
MBI05_g39046_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 8.4e-79 297.7 229 65.9
MBI05_g44690_MAGBIO Magnolia biondii HOM05D006862 ORTHO05D008726 1.1e-78 297.4 229 65.9
arahy.Tifrunner.gnm1.ann1.ZLG2GC Arachis hypogaea HOM05D006862 ORTHO05D008726 5.5e-78 295.0 229 65.9
Ah.12g052780 Amaranthus hybridus HOM05D006862 ORTHO05D008726 7.1e-78 294.7 224 66.1
MD08G1184100 Malus domestica HOM05D006862 ORTHO05D008726 7.1e-78 294.7 231 65.8
TPR.G28474 Trifolium pratense HOM05D006862 ORTHO05D008726 7.1e-78 294.7 227 67.4
Thhalv10001858m.g Eutrema salsugineum HOM05D006862 ORTHO05D008726 1.2e-77 293.9 227 63.4
arahy.Tifrunner.gnm1.ann1.F2RQ7H Arachis hypogaea HOM05D006862 ORTHO05D008726 6.0e-77 291.6 227 65.2
THA.LOC104806470 Tarenaya hassleriana HOM05D006862 ORTHO05D008726 6.0e-77 291.6 227 64.3
PSO447G0083 Papaver somniferum HOM05D006862 ORTHO05D008726 3.0e-76 289.3 228 64.0
unitig_22.g6705 Utricularia gibba HOM05D006862 ORTHO05D008726 5.1e-76 288.5 251 61.0
Aa31LG6G8550 Aethionema arabicum HOM05D006862 ORTHO05D008726 8.7e-76 287.7 227 63.4
BcaB04g17850 Brassica carinata HOM05D006862 ORTHO05D008726 8.7e-76 287.7 227 61.2
Atru.chr13.1175 Acer truncatum HOM05D006862 ORTHO05D008726 1.5e-75 287.0 232 62.1
Sp1g29820 Schrenkiella parvula HOM05D006862 ORTHO05D008726 9.7e-75 284.3 227 60.8
A08p08160 Brassica napus HOM05D006862 ORTHO05D008726 1.6e-74 283.5 227 60.4
BraA08t32838Z Brassica rapa HOM05D006862 ORTHO05D008726 1.6e-74 283.5 227 60.4
BcaC07g37529 Brassica carinata HOM05D006862 ORTHO05D008726 2.1e-74 283.1 227 60.4
BolC8t47847H Brassica oleracea HOM05D006862 ORTHO05D008726 2.1e-74 283.1 227 60.4
AT1G34770 Arabidopsis thaliana HOM05D006862 ORTHO05D008726 2.8e-74 282.7 227 61.7
Carub.0001s3270 Capsella rubella HOM05D006862 ORTHO05D008726 3.7e-74 282.3 227 61.2
CARHR034040 Cardamine hirsuta HOM05D006862 ORTHO05D008726 4.8e-74 282.0 227 60.8
PSO210G6562 Papaver somniferum HOM05D006862 ORTHO05D008726 6.3e-74 281.6 232 62.1
AL1G49800 Arabidopsis lyrata HOM05D006862 ORTHO05D008726 1.1e-73 280.8 227 60.4
Os07g0151300 Oryza sativa ssp. japonica HOM05D006862 ORTHO05D008726 1.3e-71 273.9 229 60.3
ECA236G4229 Erigeron canadensis HOM05D006862 ORTHO05D008726 2.2e-71 273.1 229 63.3
CDE10G0559 Ceratophyllum demersum HOM05D006862 ORTHO05D008726 2.1e-69 266.5 215 62.8
HPP92_002325 Vanilla planifolia HOM05D006862 ORTHO05D008726 4.6e-69 265.4 214 61.7
Zm00001eb300080 Zea mays HOM05D006862 ORTHO05D008726 3.3e-67 259.2 227 59.0
Lsat_1_v5_gn_7_11121 Lactuca sativa HOM05D001703 ORTHO05D005708 5.7e-67 258.5 214 62.6
AUR62018925 Chenopodium quinoa HOM05D006862 ORTHO05D008726 5.5e-62 241.9 227 55.1
RcHm_v2.0_Chr7g0243981 Rosa chinensis HOM05D006862 ORTHO05D008726 6.3e-58 228.4 207 58.9
Haze_22271 Corylus avellana HOM05D006862 ORTHO05D008726 7.7e-56 221.5 155 72.9
ATR0782G115 Amborella trichopoda HOM05D006862 ORTHO05D008726 1.2e-53 214.2 228 53.1
Hma1.2p1_0341F.1_g130390 Hydrangea macrophylla HOM05D006862 ORTHO05D008726 3.6e-53 212.6 150 68.7
Psat1g146360 Pisum sativum HOM05D006862 ORTHO05D008726 1.0e-44 184.5 148 62.2
Solyc10g018870.2 Solanum lycopersicum HOM05D006862 ORTHO05D008726 3.3e-43 179.5 132 63.6
Pp3c15_18480 Physcomitrium patens HOM05D006862 ORTHO05D008726 4.5e-40 169.1 213 40.8
HanXRQChr04g0123461 Helianthus annuus HOM05D006862 ORTHO05D008726 2.9e-39 166.4 150 57.3
Ciclev10006681m.g Citrus clementina HOM05D006862 ORTHO05D008726 5.0e-39 165.6 227 44.1
AagrBONN_evm.TU.Sc2ySwM_344.2907 Anthoceros agrestis HOM05D006862 ORTHO05D008726 1.5e-38 164.1 220 40.0
Mapoly0069s0077 Marchantia polymorpha HOM05D006862 ORTHO05D008726 7.2e-38 161.8 211 44.5
CBR_g23028 Chara braunii HOM05D006862 ORTHO05D008726 6.8e-36 155.2 215 37.7
CBR_g8943 Chara braunii HOM05D006862 ORTHO05D008726 6.3e-34 148.7 219 37.4
MCO09G856 Micromonas commoda HOM05D006862 ORTHO05D008726 7.0e-33 145.2 218 36.2
Psat7g091920 Pisum sativum HOM05D006862 ORTHO05D008726 3.5e-32 142.9 121 62.0
Peaxi162Scf00001g05620 Petunia axillaris HOM05D006862 ORTHO05D008726 5.9e-32 142.1 180 44.4
FAN08G1952 Fragaria x ananassa HOM05D006862 ORTHO05D008726 3.8e-31 139.4 95 75.8
Lsat_1_v5_gn_4_149521 Lactuca sativa HOM05D006862 ORTHO05D008726 5.4e-25 119.0 113 56.6
SalBow4G2162 Salvia bowleyana HOM05D006862 ORTHO05D008726 1.2e-24 117.9 72 73.6
PRCOL_00000002 Prasinoderma coloniale HOM05D006862 ORTHO05D008726 3.4e-19 99.8 217 29.5
Lsat_1_v5_gn_2_48340 Lactuca sativa HOM05D006862 ORTHO05D008726 4.9e-10 69.3 91 48.4
Lsat_1_v5_gn_6_41620 Lactuca sativa HOM05D006862 ORTHO05D008726 4.9e-10 69.3 91 48.4
MD15G1370600 Malus domestica HOM05D006862 ORTHO05D008726 1.9e-06 57.4 43 55.8


User provided reference genes

Program Settings