Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009481.1 Olea europaea HOM05D005772 ORTHO05D006468 1.9e-90 336.3 235 100.0
MSTRG.1426 Avicennia marina HOM05D005772 ORTHO05D006468 6.3e-49 198.4 240 60.0
Cc10_g12210 Coffea canephora HOM05D005772 ORTHO05D006468 8.2e-41 171.4 238 52.9
Thecc.08G129200 Theobroma cacao HOM05D005772 ORTHO05D006468 1.7e-38 163.7 233 42.5
TAR628G1655 Trochodendron aralioides HOM05D005772 ORTHO05D006468 3.2e-37 159.5 235 42.6
Migut.E01717 Erythranthe guttata HOM05D005772 ORTHO05D006468 5.5e-37 158.7 230 43.0
Migut.E00857 Erythranthe guttata HOM05D005772 ORTHO05D006468 7.2e-37 158.3 230 43.0
Duzib093G1216 Durio zibethinus HOM05D005772 ORTHO05D006468 1.2e-36 157.5 237 42.6
Gohir.A05G237000 Gossypium hirsutum HOM05D005772 ORTHO05D006468 1.2e-36 157.5 233 45.5
Migut.C01111 Erythranthe guttata HOM05D005772 ORTHO05D006468 3.6e-36 156.0 239 41.8
Gorai.009G247900 Gossypium raimondii HOM05D005772 ORTHO05D006468 6.1e-36 155.2 233 44.2
Gohir.D05G239100 Gossypium hirsutum HOM05D005772 ORTHO05D006468 2.3e-35 153.3 233 40.8
Actinidia15231 Actinidia chinensis HOM05D005772 ORTHO05D006468 8.8e-35 151.4 235 41.3
QL09p033796 Quercus lobata HOM05D005772 ORTHO05D006468 3.4e-34 149.4 241 43.2
SGA_v2.0_scaffold52G18944 Striga asiatica HOM05D005772 ORTHO05D006468 1.4e-32 144.1 242 43.0
Nn5g28367 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.8e-32 143.7 234 40.2
Dinv27285 Davidia involucrata HOM05D005772 ORTHO05D006468 4.1e-32 142.5 222 51.8
Hma1.2p1_0612F.1_g188830 Hydrangea macrophylla HOM05D005772 ORTHO05D006468 9.1e-32 141.4 232 38.4
Ciclev10003748m.g Citrus clementina HOM05D005772 ORTHO05D006468 2.0e-31 140.2 243 42.4
Nitab4.5_0000111g0180 Nicotiana tabacum HOM05D005772 ORTHO05D006468 1.7e-30 137.1 234 39.7
Actinidia21305 Actinidia chinensis HOM05D005772 ORTHO05D006468 5.0e-30 135.6 236 39.4
MBI06_g44579_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 8.5e-30 134.8 226 38.9
Nitab4.5_0004208g0030 Nicotiana tabacum HOM05D005772 ORTHO05D006468 8.5e-30 134.8 234 45.7
Lalb_Chr08g0241421 Lupinus albus HOM05D005772 ORTHO05D006468 2.5e-29 133.3 250 43.6
Manes.02G166200 Manihot esculenta HOM05D005772 ORTHO05D006468 3.2e-29 132.9 246 39.8
Potri.005G180400 Populus trichocarpa HOM05D005772 ORTHO05D006468 5.5e-29 132.1 235 37.9
Glyma.04G249200 Glycine max HOM05D005772 ORTHO05D006468 8.0e-28 128.3 248 39.9
SalBow5G3743 Salvia bowleyana HOM05D005772 ORTHO05D006468 1.0e-27 127.9 236 46.2
GSVIVG01008837001 Vitis vinifera HOM05D005772 ORTHO05D006468 1.0e-27 127.9 82 73.2
Psat5g087080 Pisum sativum HOM05D005772 ORTHO05D006468 2.3e-27 126.7 243 38.3
VMungo1309G2764 Vigna mungo HOM05D005772 ORTHO05D006468 4.0e-27 125.9 245 37.6
Cpa.g.sc64.117 Carica papaya HOM05D005772 ORTHO05D006468 5.2e-27 125.6 225 39.1
Phvul.007G102200 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.2e-26 124.4 249 38.2
Solyc11g017475.1 Solanum lycopersicum HOM05D005772 ORTHO05D006468 1.2e-26 124.4 234 44.4
CiPaw.16G025800 Carya illinoinensis HOM05D005772 ORTHO05D006468 2.0e-26 123.6 234 37.2
Lj1g0001548 Lotus japonicus HOM05D005772 ORTHO05D006468 5.7e-26 122.1 247 39.7
DCAR_003562 Daucus carota HOM05D005772 ORTHO05D006468 7.5e-26 121.7 237 42.6
SalBow5G0344 Salvia bowleyana HOM05D005772 ORTHO05D006468 7.5e-26 121.7 238 48.7
PGR042G3290 Punica granatum HOM05D005772 ORTHO05D006468 9.8e-26 121.3 226 36.3
Phvul.009G125600 Phaseolus vulgaris HOM05D005772 ORTHO05D006468 1.1e-24 117.9 188 39.4
CSS0028957 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.4e-24 116.7 217 38.2
TPR.G21059 Trifolium pratense HOM05D005772 ORTHO05D006468 5.4e-24 115.5 251 35.1
CANSAT64G1440 Cannabis sativa HOM05D005772 ORTHO05D006468 1.6e-23 114.0 247 42.1
Glyma.06G113802 Glycine max HOM05D005772 ORTHO05D006468 1.6e-23 114.0 279 46.6
Carub.0001s2117 Capsella rubella HOM05D005772 ORTHO05D006468 2.0e-23 113.6 232 42.7
Aqoxy6G00258 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.7e-23 113.2 212 42.0
arahy.Tifrunner.gnm1.ann1.AWF3QX Arachis hypogaea HOM05D005772 ORTHO05D006468 4.5e-23 112.5 233 36.9
AL1G34900 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 5.9e-23 112.1 239 42.7
AT1G21722 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 5.9e-23 112.1 236 41.5
arahy.Tifrunner.gnm1.ann1.B1JKF4 Arachis hypogaea HOM05D005772 ORTHO05D006468 5.0e-22 109.0 213 37.6
SalBow8G0153 Salvia bowleyana HOM05D005772 ORTHO05D006468 5.0e-22 109.0 239 47.7
Thhalv10008678m.g Eutrema salsugineum HOM05D005772 ORTHO05D006468 1.1e-21 107.8 238 32.4
SGA_v2.0_scaffold24G10436 Striga asiatica HOM05D002121 ORTHO05D004000 4.3e-21 105.9 207 37.7
ClCG11G015880 Citrullus lanatus HOM05D005772 ORTHO05D006468 9.5e-21 104.8 82 59.8
CsaV3_4G028090 Cucumis sativus L. HOM05D005772 ORTHO05D006468 9.5e-21 104.8 82 61.0
unitig_22.g6227 Utricularia gibba HOM05D005772 ORTHO05D006468 1.2e-20 104.4 66 68.2
MELO3C010502.2 Cucumis melo HOM05D005772 ORTHO05D006468 4.7e-20 102.4 82 59.8
CARHR022100 Cardamine hirsuta HOM05D005772 ORTHO05D006468 1.4e-19 100.9 231 34.2
BcaC05g26092 Brassica carinata HOM05D005772 ORTHO05D006468 5.2e-19 99.0 229 34.9
THA.LOC104800210 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 5.2e-19 99.0 226 32.7
A06p17810 Brassica napus HOM05D005772 ORTHO05D006468 1.7e-17 94.0 226 38.5
SGA_v2.0_scaffold52G18951 Striga asiatica HOM05D005772 ORTHO05D006468 3.7e-17 92.8 213 37.6
Lj4A634T17 Lonicera japonica HOM05D005772 ORTHO05D006468 1.8e-16 90.5 202 34.2
A07p14940 Brassica napus HOM05D005772 ORTHO05D006468 3.2e-16 89.7 225 29.8
Cfa003428 Carpinus fangiana HOM05D005772 ORTHO05D006468 2.0e-15 87.0 82 47.6
QL06p046996 Quercus lobata HOM05D005772 ORTHO05D006468 2.0e-15 87.0 82 48.8
Aa31LG7G5690 Aethionema arabicum HOM05D002121 ORTHO05D004000 2.7e-15 86.7 231 43.3
CSS0023973 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 2.3e-14 83.6 82 47.6
Nitab4.5_0003012g0080 Nicotiana tabacum HOM05D005772 ORTHO05D006468 2.3e-14 83.6 51 74.5
Potri.007G001400 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.0e-14 83.2 82 45.1
Sabra07G0001200 Salix brachista HOM05D005772 ORTHO05D006468 3.0e-14 83.2 82 46.3
Potri.007G001650 Populus trichocarpa HOM05D005772 ORTHO05D006468 3.9e-14 82.8 82 43.9
CiPaw.02G128300 Carya illinoinensis HOM05D005772 ORTHO05D006468 1.9e-13 80.5 82 45.1
PSO170G5960 Papaver somniferum HOM05D005772 ORTHO05D006468 2.5e-13 80.1 82 42.7
Lj3g0026748 Lotus japonicus HOM05D005772 ORTHO05D006468 3.3e-13 79.7 82 43.9
MBI06_g27497_MAGBIO Magnolia biondii HOM05D005772 ORTHO05D006468 3.3e-13 79.7 82 45.1
PGR031G3661 Punica granatum HOM05D005772 ORTHO05D006468 4.3e-13 79.3 82 41.5
TWI18G0423 Tripterygium wilfordii HOM05D005772 ORTHO05D006468 7.3e-13 78.6 82 43.9
GSVIVG01029533001 Vitis vinifera HOM05D005956 ORTHO05D007197 7.3e-13 78.6 82 45.1
PSO063G1689 Papaver somniferum HOM05D005772 ORTHO05D006468 9.5e-13 78.2 82 42.7
Rhsim08G0251400 Rhododendron simsii HOM05D000927 ORTHO05D000850 9.5e-13 78.2 82 43.9
Thecc.06G054300 Theobroma cacao HOM05D005772 ORTHO05D006468 2.1e-12 77.0 82 42.7
Aqoxy2G03016 Aquilegia oxysepala HOM05D005772 ORTHO05D006468 2.8e-12 76.6 82 42.7
CANSAT01G3073 Cannabis sativa HOM05D005772 ORTHO05D006468 3.6e-12 76.3 82 39.0
Prupe.3G025100 Prunus persica HOM05D005772 ORTHO05D006468 3.6e-12 76.3 82 43.9
CiPaw.01G207400 Carya illinoinensis HOM05D005772 ORTHO05D006468 4.7e-12 75.9 82 42.7
Aa31LG4G2060 Aethionema arabicum HOM05D005772 ORTHO05D006468 6.2e-12 75.5 82 42.7
Ciclev10013938m.g Citrus clementina HOM05D005772 ORTHO05D006468 6.2e-12 75.5 82 42.7
Ciclev10013939m.g Citrus clementina HOM05D005772 ORTHO05D006468 6.2e-12 75.5 82 42.7
TAR625G1307 Trochodendron aralioides HOM05D005772 ORTHO05D006468 6.2e-12 75.5 82 45.1
Oeu038376.1 Olea europaea HOM05D005772 ORTHO05D006468 8.0e-12 75.1 82 41.5
Ciclev10013941m.g Citrus clementina HOM05D005772 ORTHO05D006468 1.4e-11 74.3 82 41.5
Nn8g41076 Nelumbo nucifera HOM05D005772 ORTHO05D006468 1.4e-11 74.3 82 40.2
AT1G78922 Arabidopsis thaliana HOM05D005772 ORTHO05D006468 1.8e-11 73.9 82 40.2
CARHR072530 Cardamine hirsuta HOM05D005772 ORTHO05D006468 2.3e-11 73.6 82 41.5
AL2G39360 Arabidopsis lyrata HOM05D005772 ORTHO05D006468 4.0e-11 72.8 82 39.0
BcaB02g07187 Brassica carinata HOM05D005772 ORTHO05D006468 6.8e-11 72.0 82 41.5
BcaC08g45402 Brassica carinata HOM05D007236 ORTHO05D009150 6.8e-11 72.0 82 41.5
A07p27410 Brassica napus HOM05D005772 ORTHO05D006468 6.8e-11 72.0 82 41.5
C06p30330 Brassica napus HOM05D005772 ORTHO05D006468 6.8e-11 72.0 82 41.5
BolC6t38196H Brassica oleracea HOM05D005772 ORTHO05D006468 6.8e-11 72.0 82 41.5
BraA07t30382Z Brassica rapa HOM05D005772 ORTHO05D006468 8.9e-11 71.6 82 41.5
Carub.0002s2577 Capsella rubella HOM05D005772 ORTHO05D006468 8.9e-11 71.6 82 39.0
CSS0004874 Camellia sinensis var. sinensis HOM05D005772 ORTHO05D006468 1.5e-10 70.9 82 42.7
MD04G1024200 Malus domestica HOM05D005772 ORTHO05D006468 2.6e-10 70.1 82 41.5
HPP92_009982 Vanilla planifolia HOM05D005772 ORTHO05D006468 5.8e-10 68.9 195 27.7
vmacro10401 Vaccinium macrocarpon HOM05D005772 ORTHO05D006468 1.7e-09 67.4 82 39.0
FAN02G1413 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.9e-09 66.6 82 42.7
FAN14G5951 Fragaria x ananassa HOM05D005772 ORTHO05D006468 2.9e-09 66.6 82 42.7
FAN09G4514 Fragaria x ananassa HOM05D005772 ORTHO05D006468 3.7e-09 66.2 82 42.7
RcHm_v2.0_Chr2g0149081 Rosa chinensis HOM05D005772 ORTHO05D006468 6.4e-09 65.5 82 41.5
Medtr0032s0080 Medicago truncatula HOM05D005772 ORTHO05D006468 8.3e-09 65.1 82 36.6
Atru.chr13.1514 Acer truncatum HOM05D005772 ORTHO05D006468 2.4e-08 63.5 179 33.5
C05p20700 Brassica napus HOM05D005772 ORTHO05D006468 9.2e-08 61.6 203 35.5
Haze_17513 Corylus avellana HOM05D000187 ORTHO05D000926 6.0e-07 58.9 224 30.4
BcaB07g32170 Brassica carinata HOM05D005772 ORTHO05D006468 7.8e-07 58.5 199 36.7
Sp5g33960 Schrenkiella parvula HOM05D005772 ORTHO05D006468 1.0e-06 58.2 82 37.8
THA.LOC104813627 Tarenaya hassleriana HOM05D005772 ORTHO05D006468 1.3e-06 57.8 65 40.0
SHI31127 Sapria himalayana HOM05D005772 ORTHO05D006468 2.3e-06 57.0 57 42.1
Manes.14G007000 Manihot esculenta HOM05D005772 ORTHO05D006468 8.6e-06 55.1 65 35.4


User provided reference genes

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