Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.5e-86 322.8 159 100.0
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 5.9e-75 284.3 159 87.4
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 4.7e-56 221.5 139 77.7
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 2.6e-54 215.7 156 64.1
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 4.9e-53 211.5 157 65.6
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.6e-51 206.5 156 65.4
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 2.7e-51 205.7 157 66.2
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 1.7e-50 203.0 160 65.0
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 2.3e-50 202.6 157 64.3
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 1.9e-49 199.5 158 63.3
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 4.3e-49 198.4 144 66.7
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 1.0e-47 193.7 157 58.6
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 1.8e-47 193.0 156 59.0
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 3.1e-47 192.2 157 59.2
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 5.2e-47 191.4 157 61.1
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 8.9e-47 190.7 140 65.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.5e-46 189.9 159 60.4
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.4e-46 188.7 142 66.2
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 7.5e-46 187.6 155 58.7
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 7.5e-46 187.6 158 64.6
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 9.8e-46 187.2 156 61.5
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 9.8e-46 187.2 156 61.5
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 9.8e-46 187.2 141 64.5
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.3e-45 186.8 157 58.6
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 1.3e-45 186.8 156 58.3
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 1.3e-45 186.8 157 55.4
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.7e-45 186.4 154 57.1
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.7e-45 186.4 148 60.8
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 2.2e-45 186.0 157 54.8
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 2.2e-45 186.0 157 57.3
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 2.2e-45 186.0 152 59.2
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 1.1e-44 183.7 157 54.8
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.4e-44 183.3 159 58.5
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 1.9e-44 183.0 157 56.7
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.4e-44 182.6 143 60.8
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 4.1e-44 181.8 126 72.2
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 4.1e-44 181.8 149 60.4
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 5.4e-44 181.4 143 60.8
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 7.0e-44 181.0 156 51.9
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 9.2e-44 180.6 148 60.1
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 1.6e-43 179.9 160 54.4
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.0e-43 179.5 156 56.4
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 3.5e-43 178.7 147 56.5
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 6.0e-43 177.9 137 65.0
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 1.3e-42 176.8 147 55.1
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.3e-42 176.8 156 55.8
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.7e-42 176.4 147 58.5
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 1.7e-42 176.4 154 58.4
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 3.9e-42 175.3 157 54.8
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 8.6e-42 174.1 157 54.8
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 1.9e-41 172.9 145 55.2
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 1.9e-41 172.9 135 60.0
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 2.5e-41 172.6 146 54.8
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 3.3e-41 172.2 141 57.4
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 5.6e-41 171.4 154 53.9
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 7.3e-41 171.0 140 60.0
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 7.3e-41 171.0 147 56.5
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.6e-40 169.9 147 55.8
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 3.6e-40 168.7 150 52.0
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 6.2e-40 167.9 157 59.2
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 8.1e-40 167.5 144 56.9
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 1.1e-39 167.2 152 55.3
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 1.8e-39 166.4 143 55.2
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 2.3e-39 166.0 140 55.0
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.0e-39 165.2 144 55.6
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 5.2e-39 164.9 158 52.5
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 8.9e-39 164.1 145 52.4
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.5e-38 163.3 158 51.3
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 2.0e-38 162.9 146 54.8
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 2.0e-38 162.9 145 51.7
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 2.0e-38 162.9 157 51.6
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 2.6e-38 162.5 126 63.5
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 4.4e-38 161.8 141 54.6
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 4.4e-38 161.8 144 52.8
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 5.8e-38 161.4 142 51.4
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 7.5e-38 161.0 144 54.2
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 9.8e-38 160.6 157 50.3
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 9.8e-38 160.6 150 50.7
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 1.3e-37 160.2 146 53.4
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 1.3e-37 160.2 158 50.6
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.7e-37 159.8 146 53.4
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 2.2e-37 159.5 145 53.1
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 2.2e-37 159.5 152 53.9
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 2.2e-37 159.5 143 51.7
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 2.9e-37 159.1 158 51.9
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 3.7e-37 158.7 157 51.0
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 3.7e-37 158.7 144 54.2
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 6.4e-37 157.9 137 55.5
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 8.3e-37 157.5 156 50.6
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 8.3e-37 157.5 113 66.4
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 8.3e-37 157.5 158 51.3
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 1.1e-36 157.1 146 52.1
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.1e-36 157.1 146 53.4
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 2.4e-36 156.0 137 51.8
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 2.4e-36 156.0 158 50.0
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 4.1e-36 155.2 151 49.7
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 5.4e-36 154.8 151 49.7
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 9.2e-36 154.1 146 52.1
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 9.2e-36 154.1 151 49.7
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 9.2e-36 154.1 153 52.3
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 3.5e-35 152.1 138 50.7
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 3.5e-35 152.1 142 50.0
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 4.6e-35 151.8 133 53.4
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 5.1e-34 148.3 169 46.7
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 8.6e-34 147.5 145 49.7
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.6e-30 136.0 115 56.5
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 7.6e-30 134.4 124 55.6
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 9.9e-30 134.0 111 59.5
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 1.3e-29 133.7 111 58.6
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 1.3e-29 133.7 144 45.8
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 5.4e-28 128.3 140 47.9
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 2.1e-27 126.3 152 45.4
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 5.1e-26 121.7 142 43.0
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 4.0e-23 112.1 138 41.3
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 6.8e-23 111.3 139 41.0
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 2.6e-22 109.4 143 38.5
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 6.0e-19 98.2 82 58.5
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 2.3e-18 96.3 143 37.8
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 5.1e-18 95.1 107 45.8
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 6.2e-16 88.2 126 36.5
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 6.2e-16 88.2 138 34.8
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 6.9e-15 84.7 78 50.0
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 4.4e-14 82.0 63 61.9
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 9.9e-14 80.9 68 57.4
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 1.9e-12 76.6 87 44.8
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 6.0e-11 71.6 75 44.0
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 3.0e-10 69.3 52 63.5
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.1e-09 67.4 142 33.8
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 7.3e-09 64.7 76 44.7
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 1.4e-07 60.5 43 55.8


User provided reference genes

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