Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009369.1 Olea europaea HOM05D006965 ORTHO05D008652 1.5e-77 292.7 145 100.0
SGA_v2.0_scaffold5G03114 Striga asiatica HOM05D006965 ORTHO05D008652 4.9e-36 154.8 144 52.8
SalBow5G3371 Salvia bowleyana HOM05D006965 ORTHO05D008652 3.2e-35 152.1 144 52.8
Hma1.2p1_2998F.1_g331493 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.2e-35 151.8 146 54.1
Hma1.2p1_2998F.1_g331496 Hydrangea macrophylla HOM05D006965 ORTHO05D008652 4.2e-35 151.8 146 54.1
Dinv43490 Davidia involucrata HOM05D006965 ORTHO05D008652 3.5e-34 148.7 146 54.8
Migut.B01364 Erythranthe guttata HOM05D006965 ORTHO05D008652 7.9e-34 147.5 140 55.0
CSS0026631 Camellia sinensis var. sinensis HOM05D006965 ORTHO05D008652 1.0e-33 147.1 146 50.7
MSTRG.17063 Avicennia marina HOM05D006965 ORTHO05D008652 1.1e-32 143.7 150 51.3
Atru.chr11.2694 Acer truncatum HOM05D006965 ORTHO05D008652 7.4e-32 141.0 146 52.7
Rhsim07G0050600 Rhododendron simsii HOM05D006965 ORTHO05D008652 1.6e-31 139.8 146 48.6
Actinidia32338 Actinidia chinensis HOM05D006965 ORTHO05D008652 2.8e-31 139.0 146 50.0
vmacro13617 Vaccinium macrocarpon HOM05D006965 ORTHO05D008652 6.2e-31 137.9 141 52.5
Sopen01g033500 Solanum pennellii HOM05D006965 ORTHO05D008652 8.1e-31 137.5 144 49.3
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-30 136.7 146 51.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.4e-30 136.7 146 51.4
Sabra09G0014600 Salix brachista HOM05D006965 ORTHO05D008652 1.4e-30 136.7 146 52.1
Cfa022003 Carpinus fangiana HOM05D006965 ORTHO05D008652 2.4e-30 136.0 146 51.4
Cfa004805 Carpinus fangiana HOM05D006965 ORTHO05D008652 3.1e-30 135.6 146 51.4
Solyc01g073930.3 Solanum lycopersicum HOM05D006965 ORTHO05D008652 3.1e-30 135.6 144 48.6
Cc02_g27080 Coffea canephora HOM05D006965 ORTHO05D008652 4.0e-30 135.2 144 47.9
PGSC0003DMG400006312 Solanum tuberosum HOM05D006965 ORTHO05D008652 4.0e-30 135.2 144 48.6
Haze_10398 Corylus avellana HOM05D006965 ORTHO05D008652 9.0e-30 134.0 146 50.7
Gohir.A08G026760 Gossypium hirsutum HOM05D006965 ORTHO05D008652 1.2e-29 133.7 144 47.2
Lalb_Chr25g0283521 Lupinus albus HOM05D006965 ORTHO05D008652 2.0e-29 132.9 146 47.3
Prupe.2G004200 Prunus persica HOM05D006965 ORTHO05D008652 2.6e-29 132.5 146 50.0
Gohir.D08G037500 Gossypium hirsutum HOM05D006965 ORTHO05D008652 4.5e-29 131.7 144 46.5
Gorai.004G035500 Gossypium raimondii HOM05D006965 ORTHO05D008652 5.8e-29 131.3 144 46.5
CAN.G261.10 Capsicum annuum HOM05D006965 ORTHO05D008652 7.6e-29 131.0 144 47.9
CiPaw.13G000900 Carya illinoinensis HOM05D006965 ORTHO05D008652 2.2e-28 129.4 146 50.7
Nitab4.5_0004592g0020 Nicotiana tabacum HOM05D006965 ORTHO05D008652 2.2e-28 129.4 144 47.2
QL04p000072 Quercus lobata HOM05D006965 ORTHO05D008652 2.2e-28 129.4 144 47.9
Nitab4.5_0000892g0120 Nicotiana tabacum HOM05D006965 ORTHO05D008652 3.8e-28 128.6 144 46.5
COL.COLO4_23913 Corchorus olitorius HOM05D006280 ORTHO05D008652 4.9e-28 128.3 146 48.6
QL04p003146 Quercus lobata HOM05D006965 ORTHO05D008652 4.9e-28 128.3 146 48.6
TAR633G1267 Trochodendron aralioides HOM05D006965 ORTHO05D008652 4.9e-28 128.3 146 48.6
Thecc.01G416200 Theobroma cacao HOM05D006965 ORTHO05D008652 6.4e-28 127.9 146 46.6
TAR362G1148 Trochodendron aralioides HOM05D006965 ORTHO05D008652 6.4e-28 127.9 146 48.6
Potri.009G023200 Populus trichocarpa HOM05D006965 ORTHO05D008652 8.4e-28 127.5 146 50.0
ECA248G1794 Erigeron canadensis HOM05D006965 ORTHO05D008652 1.1e-27 127.1 147 46.3
QL04p003153 Quercus lobata HOM05D006965 ORTHO05D008652 1.1e-27 127.1 146 47.9
PSO339G5860 Papaver somniferum HOM05D006965 ORTHO05D008652 1.9e-27 126.3 146 47.3
Ciclev10031978m.g Citrus clementina HOM05D006965 ORTHO05D008652 7.1e-27 124.4 146 46.6
PGR004G0492 Punica granatum HOM05D006965 ORTHO05D008652 7.1e-27 124.4 146 48.6
THA.LOC104827577 Tarenaya hassleriana HOM05D006965 ORTHO05D008652 9.3e-27 124.0 144 45.1
CANSAT78G1981 Cannabis sativa HOM05D006965 ORTHO05D008652 1.2e-26 123.6 146 47.9
Manes.10G151000 Manihot esculenta HOM05D006965 ORTHO05D008652 1.2e-26 123.6 146 46.6
FvH4_7g00170 Fragaria vesca HOM05D006965 ORTHO05D008652 2.1e-26 122.9 146 46.6
FAN06G0111 Fragaria x ananassa HOM05D006965 ORTHO05D008652 2.1e-26 122.9 146 46.6
MD02G1318500 Malus domestica HOM05D006965 ORTHO05D008652 2.1e-26 122.9 146 47.9
PSO384G4145 Papaver somniferum HOM05D006965 ORTHO05D008652 2.1e-26 122.9 146 46.6
FAN03G0167 Fragaria x ananassa HOM05D006965 ORTHO05D008652 4.6e-26 121.7 146 46.6
GSVIVG01001368001 Vitis vinifera HOM05D006965 ORTHO05D008652 4.6e-26 121.7 146 47.9
BcaC02g12316 Brassica carinata HOM05D006965 ORTHO05D008652 6.0e-26 121.3 144 43.1
C04p05300 Brassica napus HOM05D006965 ORTHO05D008652 6.0e-26 121.3 144 43.1
BolC4t22170H Brassica oleracea HOM05D006965 ORTHO05D008652 6.0e-26 121.3 144 43.1
Glyma.08G149400 Glycine max HOM05D006965 ORTHO05D008652 6.0e-26 121.3 146 46.6
Lj3g0017203 Lotus japonicus HOM05D006965 ORTHO05D008652 6.0e-26 121.3 147 45.6
Carub.0004s2700 Capsella rubella HOM05D006965 ORTHO05D008652 7.9e-26 120.9 145 46.2
Eucgr.G02572 Eucalyptus grandis HOM05D006965 ORTHO05D008652 1.0e-25 120.6 146 47.3
Aqoxy1G00028 Aquilegia oxysepala HOM05D006965 ORTHO05D008652 1.3e-25 120.2 144 45.1
Phvul.005G039600 Phaseolus vulgaris HOM05D006965 ORTHO05D008652 1.3e-25 120.2 146 45.9
FAN01G0465 Fragaria x ananassa HOM05D006965 ORTHO05D008652 1.8e-25 119.8 146 45.9
Sc12g0002350 Simmondsia chinensis HOM05D006965 ORTHO05D008652 3.0e-25 119.0 146 43.8
BcaB02g08813 Brassica carinata HOM05D006965 ORTHO05D008652 5.1e-25 118.2 144 41.0
FAN01G2144 Fragaria x ananassa HOM05D006965 ORTHO05D008652 5.1e-25 118.2 146 45.2
MD07G1002700 Malus domestica HOM05D006965 ORTHO05D008652 6.7e-25 117.9 161 44.1
Nn2g15664 Nelumbo nucifera HOM05D006965 ORTHO05D008652 6.7e-25 117.9 146 45.9
BraA05t19431Z Brassica rapa HOM05D006965 ORTHO05D008652 1.1e-24 117.1 146 43.8
EL10Ac2g04673 Beta vulgaris HOM05D006965 ORTHO05D008652 1.5e-24 116.7 145 44.1
VMungo1080G1640 Vigna mungo HOM05D006965 ORTHO05D008652 1.5e-24 116.7 146 45.2
Medtr2g060820 Medicago truncatula HOM05D006965 ORTHO05D008652 1.9e-24 116.3 146 43.2
MBI04_g33895_MAGBIO Magnolia biondii HOM05D006965 ORTHO05D008652 2.5e-24 115.9 146 45.9
RcHm_v2.0_Chr1g0313421 Rosa chinensis HOM05D006965 ORTHO05D008652 2.5e-24 115.9 146 44.5
A05p04570 Brassica napus HOM05D006965 ORTHO05D008652 5.6e-24 114.8 146 43.2
HPP92_002651 Vanilla planifolia HOM05D006965 ORTHO05D008652 5.6e-24 114.8 146 43.8
AL4G43420 Arabidopsis lyrata HOM05D006965 ORTHO05D008652 9.6e-24 114.0 144 40.3
CsaV3_3G032450 Cucumis sativus L. HOM05D006965 ORTHO05D008652 9.6e-24 114.0 146 43.8
TPR.G11733 Trifolium pratense HOM05D006965 ORTHO05D008652 1.3e-23 113.6 146 44.5
Psat1g128200 Pisum sativum HOM05D006965 ORTHO05D008652 1.6e-23 113.2 146 43.8
Aa31LG1G25970 Aethionema arabicum HOM05D006965 ORTHO05D008652 2.8e-23 112.5 144 41.0
Sp4g26490 Schrenkiella parvula HOM05D006965 ORTHO05D008652 2.8e-23 112.5 144 41.0
AUR62012162 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.7e-23 112.1 144 43.8
Sed0016917 Sechium edule HOM05D006965 ORTHO05D008652 3.7e-23 112.1 146 44.5
AT2G44420 Arabidopsis thaliana HOM05D006965 ORTHO05D008652 8.2e-23 110.9 144 39.6
Ca_02931_v3 Cicer arietinum L. HOM05D006965 ORTHO05D008652 2.4e-22 109.4 140 44.3
Thhalv10001527m.g Eutrema salsugineum HOM05D006965 ORTHO05D008652 3.1e-22 109.0 146 38.4
ClCG10G012640 Citrullus lanatus HOM05D006965 ORTHO05D008652 5.3e-22 108.2 154 40.9
FAN10G4273 Fragaria x ananassa HOM05D006965 ORTHO05D008652 6.9e-22 107.8 144 44.4
HanXRQChr01g0018681 Helianthus annuus HOM05D006965 ORTHO05D008652 1.5e-21 106.7 144 41.7
Zm00001eb275720 Zea mays HOM05D006965 ORTHO05D008652 1.5e-21 106.7 144 43.1
Os06g0618150 Oryza sativa ssp. japonica HOM05D006965 ORTHO05D008652 4.5e-21 105.1 144 41.7
Lsat_1_v5_gn_1_110081 Lactuca sativa HOM05D006965 ORTHO05D008652 7.6e-21 104.4 132 43.9
CDE05G0249 Ceratophyllum demersum HOM05D006965 ORTHO05D008652 2.2e-20 102.8 146 43.2
Hund16040 Selenicereus undatus HOM05D006965 ORTHO05D008652 3.8e-20 102.1 144 42.4
TWI73G0408 Tripterygium wilfordii HOM05D006965 ORTHO05D008652 4.9e-20 101.7 142 43.0
Peaxi162Scf00878g00321 Petunia axillaris HOM05D006965 ORTHO05D008652 6.5e-20 101.3 161 39.8
MELO3C023943.2 Cucumis melo HOM05D006965 ORTHO05D008652 7.1e-19 97.8 144 41.0
Ah.16g102760 Amaranthus hybridus HOM05D006965 ORTHO05D008652 2.1e-18 96.3 144 38.2
ATR0605G047 Amborella trichopoda HOM05D006965 ORTHO05D008652 5.1e-17 91.7 144 36.8
unitig_26.g9594 Utricularia gibba HOM05D001227 ORTHO05D001082 1.1e-16 90.5 107 42.1
AUR62022798 Chenopodium quinoa HOM05D006965 ORTHO05D008652 3.3e-16 89.0 144 38.9
Duzib114G0529 Durio zibethinus HOM05D006965 ORTHO05D008652 3.1e-14 82.4 91 45.1
CARHR139580 Cardamine hirsuta HOM05D006965 ORTHO05D008652 1.2e-13 80.5 93 41.9
arahy.Tifrunner.gnm1.ann1.ZJD8NP Arachis hypogaea HOM05D006965 ORTHO05D008652 2.0e-08 63.2 108 36.1
arahy.Tifrunner.gnm1.ann1.Z1UMC7 Arachis hypogaea HOM05D006965 ORTHO05D008652 2.5e-08 62.8 108 36.1
Oeu025405.1 Olea europaea HOM05D006965 ORTHO05D008652 5.7e-08 61.6 43 76.7
Mapoly0087s0073 Marchantia polymorpha HOM05D006965 ORTHO05D008652 4.1e-06 55.5 120 30.0


User provided reference genes

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