Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009280.1 Olea europaea HOM05D003548 ORTHO05D004066 1.2e-168 596.7 359 100.0
Oeu050927.1 Olea europaea HOM05D003548 ORTHO05D004066 1.1e-41 174.9 251 43.4
Oeu050928.1 Olea europaea HOM05D003548 ORTHO05D004066 9.6e-41 171.8 251 43.0
Oeu003337.1 Olea europaea HOM05D003548 ORTHO05D004066 9.3e-36 155.2 258 42.6
Cc02_g02080 Coffea canephora HOM05D003548 ORTHO05D004066 1.5e-30 137.9 253 37.5
Migut.F01061 Erythranthe guttata HOM05D003548 ORTHO05D004066 5.5e-28 129.4 254 40.6
CSS0041240 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 7.9e-27 125.6 249 39.8
CSS0049608 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 7.9e-27 125.6 249 39.8
Actinidia08610 Actinidia chinensis HOM05D003548 ORTHO05D004066 6.7e-26 122.5 253 38.3
Dinv28355 Davidia involucrata HOM05D003548 ORTHO05D004066 1.1e-25 121.7 243 39.9
Dinv35294 Davidia involucrata HOM05D003548 ORTHO05D004066 2.0e-25 120.9 265 38.1
Actinidia34177 Actinidia chinensis HOM05D003548 ORTHO05D004066 6.3e-24 115.9 247 37.7
vmacro06591 Vaccinium macrocarpon HOM05D003548 ORTHO05D004066 2.9e-21 107.1 253 36.4
Hma1.2p1_0142F.1_g064160 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 7.9e-19 99.0 262 32.8
unitig_46.g18812 Utricularia gibba HOM05D003548 ORTHO05D004066 6.7e-18 95.9 261 31.4
Rhsim03G0196900 Rhododendron simsii HOM05D003548 ORTHO05D004066 8.8e-18 95.5 231 36.4
Dinv37570 Davidia involucrata HOM05D003548 ORTHO05D004066 3.3e-17 93.6 264 31.4
Hma1.2p1_0216F.1_g091270 Hydrangea macrophylla HOM05D003548 ORTHO05D004066 1.7e-16 91.3 243 32.9
Nn1g01756 Nelumbo nucifera HOM05D003548 ORTHO05D004066 3.7e-16 90.1 235 36.2
CANSAT21G0595 Cannabis sativa HOM05D003548 ORTHO05D004066 8.2e-16 89.0 280 32.1
Aqoxy5G04044 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 2.4e-15 87.4 241 34.4
GSVIVG01028755001 Vitis vinifera HOM05D003548 ORTHO05D004066 5.3e-15 86.3 250 32.8
Cc08_g15520 Coffea canephora HOM05D003548 ORTHO05D004066 2.0e-14 84.3 239 31.0
MELO3C005727.2 Cucumis melo HOM05D003548 ORTHO05D004066 2.6e-14 84.0 279 30.5
CsaV3_5G002270 Cucumis sativus L. HOM05D003548 ORTHO05D004066 2.6e-14 84.0 276 30.4
MBI06_g29318_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 4.5e-14 83.2 253 31.6
CSS0019271 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.9e-14 82.8 279 30.5
CSS0042414 Camellia sinensis var. sinensis HOM05D003548 ORTHO05D004066 5.9e-14 82.8 279 30.5
ClCG01G002150 Citrullus lanatus HOM05D003548 ORTHO05D004066 1.3e-13 81.6 279 30.1
Sed0003878 Sechium edule HOM05D003548 ORTHO05D004066 2.2e-13 80.9 258 29.1
Haze_08718 Corylus avellana HOM05D003548 ORTHO05D004066 5.0e-13 79.7 250 31.6
TWI15G1126 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 6.5e-13 79.3 288 27.1
Thecc.03G289200 Theobroma cacao HOM05D003548 ORTHO05D004066 1.5e-12 78.2 268 29.9
SalBow1G6595 Salvia bowleyana HOM05D003548 ORTHO05D004066 2.5e-12 77.4 262 30.5
TPR.G3387 Trifolium pratense HOM05D000059 ORTHO05D004066 3.2e-12 77.0 248 31.9
Cfa012267 Carpinus fangiana HOM05D003548 ORTHO05D004066 7.2e-12 75.9 265 29.1
Dinv38885 Davidia involucrata HOM05D003548 ORTHO05D004066 7.2e-12 75.9 283 30.0
Thhalv10023333m.g Eutrema salsugineum HOM05D003548 ORTHO05D004066 7.2e-12 75.9 245 29.0
Peaxi162Scf00074g00156 Petunia axillaris HOM05D003548 ORTHO05D004066 7.2e-12 75.9 230 30.4
SalBow1G7748 Salvia bowleyana HOM05D003548 ORTHO05D004066 7.2e-12 75.9 262 30.5
Duzib205G0585 Durio zibethinus HOM05D003548 ORTHO05D004066 9.4e-12 75.5 245 29.8
COL.COLO4_08334 Corchorus olitorius HOM05D003548 ORTHO05D004066 1.2e-11 75.1 290 29.7
Phvul.002G294600 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 1.2e-11 75.1 236 30.9
Potri.001G097200 Populus trichocarpa HOM05D003548 ORTHO05D004066 1.2e-11 75.1 250 28.8
QL02p032544 Quercus lobata HOM05D003548 ORTHO05D004066 1.2e-11 75.1 244 29.5
Ca_10964_v3 Cicer arietinum L. HOM05D003548 ORTHO05D004066 1.6e-11 74.7 245 28.2
Sabra01G0072500 Salix brachista HOM05D003548 ORTHO05D004066 1.6e-11 74.7 272 27.9
Carub.0002s0067 Capsella rubella HOM05D003548 ORTHO05D004066 2.7e-11 73.9 271 30.6
CiPaw.11G126900 Carya illinoinensis HOM05D003548 ORTHO05D004066 2.7e-11 73.9 293 28.7
Nitab4.5_0001748g0030 Nicotiana tabacum HOM05D003548 ORTHO05D004066 3.6e-11 73.6 215 31.6
TWI81G0889 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 3.6e-11 73.6 285 28.1
TAR636G0920 Trochodendron aralioides HOM05D003548 ORTHO05D004066 3.6e-11 73.6 277 30.7
Phvul.002G161400 Phaseolus vulgaris HOM05D003548 ORTHO05D004066 4.7e-11 73.2 259 30.5
GSVIVG01019448001 Vitis vinifera HOM05D003548 ORTHO05D004066 6.1e-11 72.8 237 27.4
Glyma.08G019800 Glycine max HOM05D003548 ORTHO05D004066 8.0e-11 72.4 248 28.6
VMungo0251G1700 Vigna mungo HOM05D003548 ORTHO05D004066 8.0e-11 72.4 251 28.3
Atru.chr9.2080 Acer truncatum HOM05D003548 ORTHO05D004066 1.0e-10 72.0 282 30.9
DCAR_008526 Daucus carota HOM05D003548 ORTHO05D004066 1.0e-10 72.0 228 30.7
AL2G10890 Arabidopsis lyrata HOM05D003548 ORTHO05D004066 1.4e-10 71.6 271 31.0
Aqoxy7G00221 Aquilegia oxysepala HOM05D003548 ORTHO05D004066 2.3e-10 70.9 251 30.7
Migut.A00697 Erythranthe guttata HOM05D003548 ORTHO05D004066 2.3e-10 70.9 245 29.8
Sed0010954 Sechium edule HOM05D003548 ORTHO05D004066 2.3e-10 70.9 250 29.6
CiPaw.12G087100 Carya illinoinensis HOM05D003548 ORTHO05D004066 3.0e-10 70.5 258 29.1
Duzib068G0600 Durio zibethinus HOM05D003548 ORTHO05D004066 3.0e-10 70.5 245 29.8
Gohir.D09G185600 Gossypium hirsutum HOM05D003548 ORTHO05D004066 3.0e-10 70.5 246 27.2
Glyma.05G213300 Glycine max HOM05D003548 ORTHO05D004066 3.9e-10 70.1 248 28.2
SGA_v2.0_scaffold192G40598 Striga asiatica HOM05D003548 ORTHO05D004066 3.9e-10 70.1 153 37.9
AT1G64140 Arabidopsis thaliana HOM05D003548 ORTHO05D004066 5.2e-10 69.7 271 30.6
MD06G1096100 Malus domestica HOM05D003548 ORTHO05D004066 5.2e-10 69.7 255 30.6
Prupe.5G110700 Prunus persica HOM05D003548 ORTHO05D004066 5.2e-10 69.7 247 30.4
TWI60G0243 Tripterygium wilfordii HOM05D003548 ORTHO05D004066 5.2e-10 69.7 245 26.5
GSVIVG01003094001 Vitis vinifera HOM05D003548 ORTHO05D004066 6.7e-10 69.3 157 36.3
Eucgr.E00807 Eucalyptus grandis HOM05D003548 ORTHO05D004066 8.8e-10 68.9 248 30.6
Gorai.006G208300 Gossypium raimondii HOM05D003548 ORTHO05D004066 8.8e-10 68.9 246 27.2
Glyma.01G223400 Glycine max HOM05D003548 ORTHO05D004066 2.0e-09 67.8 243 29.6
Psat7g029120 Pisum sativum HOM05D003548 ORTHO05D004066 3.3e-09 67.0 260 28.1
TAR629G2865 Trochodendron aralioides HOM05D003548 ORTHO05D004066 3.3e-09 67.0 268 31.3
Gohir.A09G191100 Gossypium hirsutum HOM05D003548 ORTHO05D004066 5.7e-09 66.2 246 26.8
Sp2g00590 Schrenkiella parvula HOM05D003548 ORTHO05D004066 7.4e-09 65.9 238 28.2
Lj4g0009292 Lotus japonicus HOM05D003548 ORTHO05D004066 1.7e-08 64.7 261 28.4
Oeu042375.2 Olea europaea HOM05D003548 ORTHO05D004066 1.7e-08 64.7 241 28.2
Hund11425 Selenicereus undatus HOM05D000154 ORTHO05D004066 2.2e-08 64.3 202 29.2
Potri.003G134200 Populus trichocarpa HOM05D003548 ORTHO05D004066 3.7e-08 63.5 257 28.8
EL10Ac3g05370 Beta vulgaris HOM05D003548 ORTHO05D004066 4.8e-08 63.2 234 29.1
DCAR_006852 Daucus carota HOM05D003548 ORTHO05D004066 4.8e-08 63.2 229 27.9
Os01g0621900 Oryza sativa ssp. japonica HOM05D003548 ORTHO05D004066 4.8e-08 63.2 212 29.2
Gohir.D03G080300 Gossypium hirsutum HOM05D003548 ORTHO05D004066 6.3e-08 62.8 253 27.7
Sopen08g030060 Solanum pennellii HOM05D003548 ORTHO05D004066 6.3e-08 62.8 247 28.7
PSO063G3847 Papaver somniferum HOM05D003548 ORTHO05D004066 8.2e-08 62.4 170 30.6
PSO170G6721 Papaver somniferum HOM05D003548 ORTHO05D004066 8.2e-08 62.4 242 27.7
Gorai.003G083700 Gossypium raimondii HOM05D003548 ORTHO05D004066 1.1e-07 62.0 253 28.1
Oeu059583.1 Olea europaea HOM05D003548 ORTHO05D004066 1.8e-07 61.2 238 29.0
THA.LOC104809354 Tarenaya hassleriana HOM05D003548 ORTHO05D004066 1.8e-07 61.2 238 28.2
CARHR046800 Cardamine hirsuta HOM05D003548 ORTHO05D004066 3.1e-07 60.5 240 29.6
BcaB07g31439 Brassica carinata HOM05D003548 ORTHO05D008486 5.3e-07 59.7 248 27.8
Gohir.A02G103700 Gossypium hirsutum HOM05D003548 ORTHO05D004066 5.3e-07 59.7 253 27.3
Sc13g0009440 Simmondsia chinensis HOM05D003548 ORTHO05D004066 5.3e-07 59.7 199 30.7
Zm00001eb159560 Zea mays HOM05D003548 ORTHO05D004066 5.3e-07 59.7 251 31.5
MD14G1116300 Malus domestica HOM05D003548 ORTHO05D004066 9.1e-07 58.9 257 29.6
Rhsim02G0237200 Rhododendron simsii HOM05D003548 ORTHO05D004066 9.1e-07 58.9 258 27.1
MBI07_g38645_MAGBIO Magnolia biondii HOM05D003548 ORTHO05D004066 1.6e-06 58.2 251 26.3
HanXRQChr09g0253141 Helianthus annuus HOM05D003548 ORTHO05D004066 3.5e-06 57.0 211 29.4
BcaC04g22534 Brassica carinata HOM05D003548 ORTHO05D004066 7.7e-06 55.8 238 27.3
C09p18070 Brassica napus HOM05D003548 ORTHO05D004066 7.7e-06 55.8 238 27.3


User provided reference genes

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