Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009116.2 Olea europaea HOM05D006445 ORTHO05D008030 2.5e-53 211.8 107 100.0
Oeu064236.1 Olea europaea HOM05D006445 ORTHO05D008030 6.4e-41 170.6 106 80.2
SalBow2G0732 Salvia bowleyana HOM05D006445 ORTHO05D008030 3.0e-22 108.6 106 54.7
MSTRG.4074 Avicennia marina HOM05D006445 ORTHO05D008030 5.1e-22 107.8 103 53.4
Nitab4.5_0002446g0090 Nicotiana tabacum HOM05D006445 ORTHO05D008030 8.7e-22 107.1 106 54.7
Nitab4.5_0000321g0290 Nicotiana tabacum HOM05D006445 ORTHO05D008030 2.1e-20 102.4 106 53.8
Solyc06g053920.4 Solanum lycopersicum HOM05D006445 ORTHO05D008030 2.8e-20 102.1 106 53.8
Sopen06g019080 Solanum pennellii HOM05D006445 ORTHO05D008030 3.7e-20 101.7 106 53.8
Actinidia08458 Actinidia chinensis HOM05D006445 ORTHO05D008030 6.2e-20 100.9 106 48.1
PGSC0003DMG400016314 Solanum tuberosum HOM05D006445 ORTHO05D008030 1.1e-19 100.1 106 52.8
Rhsim02G0031200 Rhododendron simsii HOM05D006445 ORTHO05D008030 2.4e-19 99.0 103 48.5
Actinidia18525 Actinidia chinensis HOM05D006445 ORTHO05D008030 9.0e-19 97.1 103 48.5
Peaxi162Scf00131g00510 Petunia axillaris HOM05D006445 ORTHO05D008030 1.5e-18 96.3 96 53.1
GSVIVG01018073001 Vitis vinifera HOM05D006445 ORTHO05D008030 2.6e-18 95.5 106 47.2
Prupe.1G023800 Prunus persica HOM05D006445 ORTHO05D008030 7.6e-18 94.0 104 50.0
CAN.G231.21 Capsicum annuum HOM05D006445 ORTHO05D008030 1.7e-17 92.8 99 50.5
CSS0014472 Camellia sinensis var. sinensis HOM05D006445 ORTHO05D008030 2.2e-17 92.4 97 48.5
Cfa008415 Carpinus fangiana HOM05D006445 ORTHO05D008030 3.8e-17 91.7 103 47.6
vmacro15391 Vaccinium macrocarpon HOM05D006445 ORTHO05D008030 3.8e-17 91.7 100 46.0
Haze_11252 Corylus avellana HOM05D006445 ORTHO05D008030 4.9e-17 91.3 103 48.5
CiPaw.01G193800 Carya illinoinensis HOM05D006445 ORTHO05D008030 6.4e-17 90.9 103 46.6
QL06p000554 Quercus lobata HOM05D006445 ORTHO05D008030 6.4e-17 90.9 106 46.2
Ciclev10004554m.g Citrus clementina HOM05D006445 ORTHO05D008030 1.1e-16 90.1 106 46.2
CsaV3_2G013340 Cucumis sativus L. HOM05D006445 ORTHO05D008030 1.4e-16 89.7 106 44.3
SGA_v2.0_scaffold101G29748 Striga asiatica HOM05D006445 ORTHO05D008030 1.4e-16 89.7 106 47.2
TAR362G0995 Trochodendron aralioides HOM05D006445 ORTHO05D008030 1.4e-16 89.7 106 43.4
Dinv14061 Davidia involucrata HOM05D006445 ORTHO05D008030 1.9e-16 89.4 96 45.8
Nn3g19455 Nelumbo nucifera HOM05D006445 ORTHO05D008030 5.5e-16 87.8 106 40.6
MELO3C014278.2 Cucumis melo HOM05D006445 ORTHO05D008030 1.2e-15 86.7 106 43.4
Duzib151G0014 Durio zibethinus HOM05D006445 ORTHO05D008030 2.1e-15 85.9 106 44.3
Nn1g02503 Nelumbo nucifera HOM05D006445 ORTHO05D008030 2.1e-15 85.9 101 45.5
Cc03_g04450 Coffea canephora HOM05D006445 ORTHO05D008030 3.5e-15 85.1 101 48.5
Hma1.2p1_1095F.1_g256580 Hydrangea macrophylla HOM05D006445 ORTHO05D008030 4.6e-15 84.7 106 41.5
arahy.Tifrunner.gnm1.ann1.G28WYQ Arachis hypogaea HOM05D006445 ORTHO05D008030 7.9e-15 84.0 101 45.5
Migut.G00392 Erythranthe guttata HOM05D006445 ORTHO05D008030 1.0e-14 83.6 106 47.2
HanXRQChr12g0380371 Helianthus annuus HOM05D006445 ORTHO05D008030 1.3e-14 83.2 100 48.0
Gohir.D09G222500 Gossypium hirsutum HOM05D006445 ORTHO05D008030 1.8e-14 82.8 106 46.2
Gorai.006G243700 Gossypium raimondii HOM05D006445 ORTHO05D008030 1.8e-14 82.8 106 46.2
Atru.chr4.2321 Acer truncatum HOM05D006445 ORTHO05D008030 3.0e-14 82.0 109 42.2
Potri.008G159500 Populus trichocarpa HOM05D006445 ORTHO05D008030 3.0e-14 82.0 104 45.2
TWI09G0629 Tripterygium wilfordii HOM05D006445 ORTHO05D008030 3.0e-14 82.0 90 46.7
Cpa.g.sc44.136 Carica papaya HOM05D006445 ORTHO05D008030 5.1e-14 81.3 106 41.5
TAR549G0008 Trochodendron aralioides HOM05D006445 ORTHO05D008030 5.1e-14 81.3 106 41.5
TAR633G2087 Trochodendron aralioides HOM05D006445 ORTHO05D008030 5.1e-14 81.3 106 41.5
Thecc.04G241400 Theobroma cacao HOM05D006445 ORTHO05D008030 1.5e-13 79.7 96 46.9
ClCG06G006550 Citrullus lanatus HOM05D006445 ORTHO05D008030 1.9e-13 79.3 106 41.5
Migut.G00407 Erythranthe guttata HOM05D006445 ORTHO05D008030 3.3e-13 78.6 106 46.2
Gohir.A09G220300 Gossypium hirsutum HOM05D006445 ORTHO05D008030 4.3e-13 78.2 106 43.4
Sabra08G0121600 Salix brachista HOM05D006445 ORTHO05D008030 4.3e-13 78.2 101 44.6
Aqoxy5G00384 Aquilegia oxysepala HOM05D006445 ORTHO05D008030 5.6e-13 77.8 105 41.0
unitig_749.g14084 Utricularia gibba HOM05D006445 ORTHO05D008030 9.6e-13 77.0 89 47.2
Duzib212G0108 Durio zibethinus HOM05D006445 ORTHO05D008030 1.6e-12 76.3 106 41.5
Lalb_Chr03g0037581 Lupinus albus HOM05D006445 ORTHO05D008030 1.6e-12 76.3 90 45.6
DCAR_002362 Daucus carota HOM05D006445 ORTHO05D008030 2.1e-12 75.9 106 44.3
FvH4_4g01790 Fragaria vesca HOM05D006445 ORTHO05D008030 2.1e-12 75.9 106 43.4
FAN12G4074 Fragaria x ananassa HOM05D006445 ORTHO05D008030 2.1e-12 75.9 106 43.4
Lj6A648T26 Lonicera japonica HOM05D006445 ORTHO05D008030 2.1e-12 75.9 105 42.9
Hund20068 Selenicereus undatus HOM05D006445 ORTHO05D008030 2.1e-12 75.9 106 44.3
FAN17G0812 Fragaria x ananassa HOM05D006445 ORTHO05D008030 2.8e-12 75.5 106 42.5
PSO541G5254 Papaver somniferum HOM05D006445 ORTHO05D008030 3.7e-12 75.1 97 45.4
MD16G1202300 Malus domestica HOM05D006445 ORTHO05D008030 8.2e-12 73.9 103 41.7
COL.COLO4_13180 Corchorus olitorius HOM05D006445 ORTHO05D008030 1.1e-11 73.6 106 42.5
AUR62039163 Chenopodium quinoa HOM05D006445 ORTHO05D008030 4.0e-11 71.6 106 40.6
FAN22G0464 Fragaria x ananassa HOM05D006445 ORTHO05D008030 4.0e-11 71.6 106 40.6
HPP92_007968 Vanilla planifolia HOM05D006445 ORTHO05D008030 1.2e-10 70.1 87 41.4
Phvul.007G279100 Phaseolus vulgaris HOM05D006445 ORTHO05D008030 1.5e-10 69.7 104 40.4
PSO675G2091 Papaver somniferum HOM05D006445 ORTHO05D008030 2.0e-10 69.3 101 40.6
CDE10G0086 Ceratophyllum demersum HOM05D006445 ORTHO05D008030 3.4e-10 68.6 100 43.0
Glyma.02G001900 Glycine max HOM05D006445 ORTHO05D008030 4.5e-10 68.2 108 42.6
VMungo0720G0393 Vigna mungo HOM05D006445 ORTHO05D008030 4.5e-10 68.2 104 39.4
CANSAT78G1649 Cannabis sativa HOM05D006445 ORTHO05D008030 5.8e-10 67.8 106 38.7
DCAR_024183 Daucus carota HOM05D006445 ORTHO05D008030 1.0e-09 67.0 99 42.4
Eucgr.H03403 Eucalyptus grandis HOM05D006445 ORTHO05D008030 1.0e-09 67.0 90 42.2
RcHm_v2.0_Chr4g0388821 Rosa chinensis HOM05D006445 ORTHO05D008030 2.2e-09 65.9 106 39.6
Sed0027736 Sechium edule HOM05D006445 ORTHO05D008030 2.2e-09 65.9 106 38.7
DCAR_027254 Daucus carota HOM05D006445 ORTHO05D008030 2.9e-09 65.5 113 38.9
EL10As20g24207 Beta vulgaris HOM05D006445 ORTHO05D008030 3.8e-09 65.1 103 41.7
Os11g0586300 Oryza sativa ssp. japonica HOM05D006445 ORTHO05D008030 1.4e-08 63.2 106 37.7
Psat6g103160 Pisum sativum HOM05D006445 ORTHO05D008030 1.4e-08 63.2 101 40.6
Manes.03G171500 Manihot esculenta HOM05D006445 ORTHO05D008030 2.5e-08 62.4 97 38.1
TPR.G32777 Trifolium pratense HOM05D006445 ORTHO05D008030 7.1e-08 60.8 101 40.6
ATR0665G293 Amborella trichopoda HOM05D006445 ORTHO05D008030 1.2e-07 60.1 108 38.0
Thhalv10020381m.g Eutrema salsugineum HOM05D006445 ORTHO05D008030 1.6e-07 59.7 94 35.1
Medtr1g041275 Medicago truncatula HOM05D006445 ORTHO05D008030 1.6e-07 59.7 101 39.6
Sp3g20620 Schrenkiella parvula HOM05D006445 ORTHO05D008030 3.5e-07 58.5 104 33.7
Sc15g0003230 Simmondsia chinensis HOM05D006445 ORTHO05D008030 1.0e-06 57.0 106 34.9
AL5G37040 Arabidopsis lyrata HOM05D006445 ORTHO05D008030 1.8e-06 56.2 99 32.3
AT3G55760 Arabidopsis thaliana HOM05D006445 ORTHO05D008030 3.0e-06 55.5 99 32.3
Aa31LG8G9430 Aethionema arabicum HOM05D006445 ORTHO05D008030 3.9e-06 55.1 94 33.0
Ca_23527_v3 Cicer arietinum L. HOM05D006445 ORTHO05D008030 5.1e-06 54.7 101 38.6
PGR004G1989 Punica granatum HOM05D006445 ORTHO05D008030 8.7e-06 53.9 101 36.6


User provided reference genes

Program Settings