Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 4.1e-204 714.5 367 100.0
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.6e-115 420.2 389 63.0
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 2.3e-106 389.8 391 57.5
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 3.8e-101 372.5 379 58.6
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 8.5e-101 371.3 373 56.8
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 4.2e-100 369.0 382 57.1
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 2.3e-98 363.2 370 57.3
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 2.2e-96 356.7 394 53.6
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 2.8e-96 356.3 383 55.1
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 1.5e-94 350.5 388 54.6
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.5e-92 343.2 408 54.7
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 7.2e-92 341.7 373 54.2
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 2.8e-88 329.7 379 52.5
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 2.8e-88 329.7 369 56.1
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 6.3e-88 328.6 374 51.3
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 1.1e-87 327.8 367 54.2
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 3.1e-87 326.2 368 50.3
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 5.3e-87 325.5 377 53.8
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 7.0e-87 325.1 384 51.8
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 7.2e-84 315.1 383 50.4
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 4.0e-82 309.3 370 51.6
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 2.2e-80 303.5 395 48.4
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 2.2e-80 303.5 390 49.2
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 3.7e-80 302.8 384 49.7
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 8.2e-80 301.6 375 49.6
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 1.4e-79 300.8 369 47.4
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 1.8e-79 300.4 390 49.7
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 1.8e-79 300.4 379 48.8
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 1.8e-79 300.4 380 48.9
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 2.4e-79 300.1 372 49.7
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 2.4e-79 300.1 371 49.6
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 7.0e-79 298.5 381 48.8
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 9.1e-79 298.1 395 48.4
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 9.1e-79 298.1 382 48.7
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 1.2e-78 297.7 386 49.0
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 2.7e-78 296.6 381 50.7
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 4.5e-78 295.8 461 44.7
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 4.5e-78 295.8 379 49.6
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 4.5e-78 295.8 381 48.6
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 5.9e-78 295.4 378 50.0
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 1.7e-77 293.9 396 47.7
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 1.5e-76 290.8 374 47.9
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 1.9e-76 290.4 407 46.9
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.5e-76 290.0 388 50.8
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 1.2e-75 287.7 373 50.1
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 1.2e-75 287.7 411 46.0
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 1.2e-75 287.7 374 48.7
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 3.6e-75 286.2 354 51.1
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 3.0e-74 283.1 369 49.6
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 3.0e-74 283.1 384 49.0
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 4.0e-74 282.7 376 50.3
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 6.8e-74 282.0 384 49.5
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 8.8e-74 281.6 386 49.7
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 1.5e-73 280.8 367 47.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 1.5e-73 280.8 268 59.0
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 1.5e-73 280.8 376 47.9
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 2.0e-73 280.4 376 45.2
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 1.3e-72 277.7 368 46.7
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 2.4e-71 273.5 395 44.1
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 3.1e-71 273.1 376 46.0
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 5.9e-70 268.9 382 46.1
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 7.7e-70 268.5 376 46.0
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.7e-69 267.3 373 47.2
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 2.3e-69 266.9 382 45.5
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 2.9e-69 266.5 378 45.5
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 2.9e-69 266.5 382 45.5
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.1e-68 264.6 369 46.3
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 2.5e-68 263.5 369 46.1
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 3.2e-68 263.1 369 46.1
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 4.2e-68 262.7 379 45.6
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 4.7e-67 259.2 373 46.9
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 5.2e-66 255.8 226 60.6
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.6e-65 253.4 228 59.2
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.2e-64 250.4 232 59.5
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 3.7e-64 249.6 378 45.0
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 5.9e-62 242.3 225 59.6
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.9e-60 237.3 469 40.3
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 1.9e-60 237.3 228 57.5
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 5.6e-60 235.7 229 59.0
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 1.3e-56 224.6 373 39.7
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 8.3e-56 221.9 305 47.2
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 1.4e-55 221.1 381 41.2
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 1.6e-54 217.6 216 56.5
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 3.5e-54 216.5 229 55.0
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 3.0e-53 213.4 362 42.0
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 3.0e-53 213.4 261 48.7
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 3.3e-52 209.9 278 48.2
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 1.2e-51 208.0 258 48.8
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 2.8e-51 206.8 275 45.8
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 1.1e-50 204.9 152 68.4
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 2.3e-50 203.8 323 43.0
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 5.8e-49 199.1 359 39.6
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 1.3e-48 198.0 397 36.8
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 6.4e-48 195.7 244 51.2
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 5.4e-47 192.6 315 42.5
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.5e-44 183.7 248 46.8
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 4.7e-43 179.5 283 43.8
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 5.8e-41 172.6 223 50.2
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 7.5e-41 172.2 282 40.8
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 3.7e-40 169.9 228 42.5
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 6.4e-40 169.1 387 33.9
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 8.3e-40 168.7 233 44.2
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 2.7e-38 163.7 222 48.2
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 1.6e-35 154.5 385 31.7
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 9.9e-33 145.2 394 34.3
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 2.1e-30 137.5 348 32.2
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 3.5e-30 136.7 164 51.2
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 6.6e-29 132.5 290 37.2
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 6.6e-29 132.5 228 39.5
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 5.2e-26 122.9 145 51.7
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 5.2e-26 122.9 145 51.7
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 1.5e-25 121.3 220 41.4
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 1.7e-21 107.8 191 41.4
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.6e-19 101.3 102 55.9
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 6.2e-19 99.4 92 60.9
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 2.4e-18 97.4 99 50.5
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 5.3e-18 96.3 70 67.1
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 4.5e-17 93.2 224 30.8
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 3.8e-16 90.1 175 37.1
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 8.4e-16 89.0 63 68.3
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 3.3e-12 77.0 63 60.3
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 1.8e-10 71.2 72 55.6
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 9.9e-09 65.5 89 41.6


User provided reference genes

Program Settings