Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008876.1 Olea europaea HOM05D002759 ORTHO05D003290 0.0e+00 2751.1 1362 100.0
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 0.0e+00 1214.9 1439 49.1
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 0.0e+00 1190.3 1435 47.7
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 0.0e+00 1115.1 1436 45.9
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 0.0e+00 1077.8 1509 43.5
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.9e-307 1059.7 1395 45.5
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 3.2e-286 989.2 1515 40.7
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 3.3e-283 979.2 1523 41.0
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 4.2e-278 962.2 1517 39.8
Cfa017189 Carpinus fangiana HOM05D002759 ORTHO05D003290 4.3e-275 952.2 1500 39.4
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 7.4e-275 951.4 1509 40.1
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 3.3e-267 926.0 1494 38.7
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 1.6e-266 923.7 1517 39.6
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 4.8e-266 922.2 1494 38.6
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 1.4e-265 920.6 1521 39.3
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 1.0e-263 914.4 1487 39.5
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 1.5e-259 900.6 1504 39.2
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 1.5e-259 900.6 1594 37.1
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 2.0e-256 890.2 1472 38.2
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 1.4e-254 884.0 1496 38.1
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 1.9e-254 883.6 1481 38.3
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 7.2e-254 881.7 1513 37.7
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 5.7e-251 872.1 1506 38.6
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 9.7e-251 871.3 1506 38.6
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 2.0e-248 863.6 1512 38.4
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 3.4e-248 862.8 1506 37.6
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.7e-247 860.5 1498 37.4
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 2.2e-247 860.1 1479 38.2
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 1.1e-246 857.8 1499 37.0
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 7.2e-246 855.1 1506 36.6
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 6.1e-245 852.0 1471 37.9
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.0e-244 851.3 1518 36.5
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 1.4e-244 850.9 1480 37.6
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.5e-243 847.4 1397 38.6
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 1.7e-242 844.0 1524 37.8
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 4.8e-242 842.4 1502 36.7
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 1.8e-241 840.5 1493 36.7
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 1.5e-240 837.4 1500 37.6
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 3.8e-239 832.8 1510 36.2
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 1.4e-238 830.9 1488 38.2
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 2.1e-237 827.0 1519 36.7
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 3.3e-235 819.7 1499 36.5
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 3.3e-235 819.7 1585 35.4
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 1.7e-234 817.4 1471 36.9
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 8.2e-234 815.1 1507 37.0
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 2.0e-232 810.4 1498 37.2
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 9.4e-230 801.6 1511 36.2
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 1.2e-221 774.6 1331 38.4
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 1.6e-221 774.2 1514 34.7
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 2.7e-221 773.5 1508 35.9
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 1.0e-220 771.5 1489 34.9
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 3.1e-217 760.0 1508 35.5
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 9.1e-217 758.4 1547 35.1
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 1.0e-215 755.0 1510 34.8
Gorai.002G207900 Gossypium raimondii HOM05D002759 ORTHO05D003290 2.3e-215 753.8 1499 34.4
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 5.0e-215 752.7 1502 35.6
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 2.5e-214 750.4 1499 35.4
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 3.3e-214 750.0 1488 34.6
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 7.2e-214 748.8 1490 34.2
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 1.6e-213 747.7 1500 35.3
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 2.8e-213 746.9 1495 34.5
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 4.7e-213 746.1 1513 35.5
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 4.0e-212 743.0 1507 34.8
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 2.6e-211 740.3 1490 34.4
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 2.8e-210 736.9 1490 35.5
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 3.7e-210 736.5 1515 35.2
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 6.3e-210 735.7 1495 34.6
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 6.3e-210 735.7 1529 35.0
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 3.2e-209 733.4 1512 35.2
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 4.1e-209 733.0 1510 35.3
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 7.0e-209 732.3 1499 34.6
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 4.5e-208 729.6 1514 35.4
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 7.8e-208 728.8 1500 34.6
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 1.3e-207 728.0 1509 34.5
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 3.9e-207 726.5 1494 34.9
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 8.6e-207 725.3 1529 33.9
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 3.2e-201 706.8 1588 34.1
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 9.2e-201 705.3 1506 33.8
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 1.2e-200 704.9 1517 34.2
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 2.7e-200 703.7 1476 33.8
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.2e-192 678.3 1497 33.1
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 1.2e-192 678.3 1497 33.1
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 1.2e-189 668.3 958 42.0
Sc19g0000800 Simmondsia chinensis HOM05D002759 ORTHO05D003290 4.7e-189 666.4 1427 33.7
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 1.8e-188 664.5 1495 33.3
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 1.1e-182 645.2 1488 32.7
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 8.4e-178 629.0 1497 32.8
MSTRG.16534 Avicennia marina HOM05D002759 ORTHO05D003290 1.6e-176 624.8 874 43.1
EL10Ac3g05252 Beta vulgaris HOM05D002759 ORTHO05D003290 3.0e-175 620.5 1516 31.7
AUR62035559 Chenopodium quinoa HOM05D002759 ORTHO05D003290 8.1e-173 612.5 1450 32.8
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 1.6e-160 571.6 1473 31.7
Hund11642 Selenicereus undatus HOM05D002759 ORTHO05D003290 3.4e-155 553.9 1553 29.5
Oeu043988.1 Olea europaea HOM05D002759 ORTHO05D003290 4.1e-148 530.4 928 38.1
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 2.0e-147 528.1 747 42.2
Hund21015 Selenicereus undatus HOM05D002759 ORTHO05D003290 2.0e-147 528.1 1391 31.1
Gohir.D01G167432 Gossypium hirsutum HOM05D002759 ORTHO05D003290 7.6e-147 526.2 1043 34.9
AUR62006068 Chenopodium quinoa HOM05D002759 ORTHO05D003290 2.2e-141 508.1 1178 32.7
BcaB02g09105 Brassica carinata HOM05D002759 ORTHO05D003290 1.2e-136 492.3 1509 28.8
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 6.1e-136 490.0 1468 29.3
FAN08G3490 Fragaria x ananassa HOM05D002759 ORTHO05D003290 7.9e-136 489.6 1356 29.9
Ah.07g205390 Amaranthus hybridus HOM05D002759 ORTHO05D003290 3.3e-134 484.2 1425 28.9
RcHm_v2.0_Chr7g0177921 Rosa chinensis HOM05D002759 ORTHO05D003290 9.7e-134 482.6 1403 30.1
BolC4t22942H Brassica oleracea HOM05D002759 ORTHO05D003290 8.2e-133 479.6 1484 29.4
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 1.1e-132 479.2 1550 28.2
BcaC02g11623 Brassica carinata HOM05D002759 ORTHO05D003290 2.9e-130 471.1 1452 29.6
Cpa.g.sc148.31 Carica papaya HOM05D002759 ORTHO05D003290 3.6e-128 464.2 833 36.5
C04p13030 Brassica napus HOM05D002759 ORTHO05D003290 1.3e-122 445.7 1400 28.9
C04p07370 Brassica napus HOM05D002759 ORTHO05D003290 7.5e-118 429.9 1419 28.0
CARHR230010 Cardamine hirsuta HOM05D002759 ORTHO05D003290 9.7e-118 429.5 1019 32.9
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 4.8e-117 427.2 902 33.7
Gohir.A01G176651 Gossypium hirsutum HOM05D002759 ORTHO05D003290 6.1e-112 410.2 903 33.4
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 1.4e-108 399.1 948 31.6
HPP92_009112 Vanilla planifolia HOM05D002759 ORTHO05D003290 7.7e-99 366.7 1422 27.8
CDE09G0711 Ceratophyllum demersum HOM05D002759 ORTHO05D003290 2.9e-93 348.2 938 31.8
Lj9A311T56 Lonicera japonica HOM05D002759 ORTHO05D003290 5.0e-90 337.4 413 47.0
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 1.2e-86 326.2 537 39.1
MD15G1419000 Malus domestica HOM05D002759 ORTHO05D003290 8.1e-80 303.5 662 33.8
Cpa.g.sc148.32 Carica papaya HOM05D002759 ORTHO05D003290 1.3e-77 296.2 406 41.9
BolC4t22359H Brassica oleracea HOM05D002759 ORTHO05D003290 2.8e-72 278.5 1058 26.7
Aqoxy3G00698 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.4e-70 271.6 599 33.9
Os02g0770700 Oryza sativa ssp. japonica HOM05D002759 ORTHO05D003290 9.2e-68 263.5 932 26.8
arahy.Tifrunner.gnm1.ann1.JK8JKR Arachis hypogaea HOM05D002759 ORTHO05D003290 1.3e-66 259.6 862 28.9
SEGI_09272 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.1e-65 256.5 723 28.8
Atru.chr12.1442 Acer truncatum HOM05D002759 ORTHO05D003290 2.0e-62 245.7 937 28.1
C04p12980 Brassica napus HOM05D002759 ORTHO05D003290 4.9e-61 241.1 1077 25.7
FAN04G1156 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.2e-59 236.5 403 38.2
SMO356G0583 Selaginella moellendorffii HOM05D002759 ORTHO05D003290 1.0e-58 233.4 1379 23.6
vmacro01780 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 1.6e-56 226.1 324 39.5
SHI26607 Sapria himalayana HOM05D002759 ORTHO05D003290 6.2e-56 224.2 591 31.6
MD08G1226100 Malus domestica HOM05D002759 ORTHO05D003290 2.7e-51 208.8 449 32.7
Mapoly0118s0005 Marchantia polymorpha HOM05D002759 ORTHO05D003290 1.1e-49 203.4 1640 22.2
FAN13G1302 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.8e-48 198.0 370 35.7
Pp3c8_2900 Physcomitrium patens HOM05D002759 ORTHO05D003290 2.9e-45 188.7 1672 21.1
AagrBONN_evm.TU.Sc2ySwM_117.1581 Anthoceros agrestis HOM05D002759 ORTHO05D003290 3.0e-42 178.7 1645 21.0
CARHR254480 Cardamine hirsuta HOM05D002759 ORTHO05D003290 7.4e-41 174.1 360 33.6
GSVIVG01032173001 Vitis vinifera HOM05D002759 ORTHO05D003290 9.6e-41 173.7 152 59.2
ATR0661G182 Amborella trichopoda HOM05D002759 ORTHO05D003290 9.0e-39 167.2 336 33.6
Hund17373 Selenicereus undatus HOM05D002759 ORTHO05D003290 6.5e-29 134.4 532 29.1
VMungo0251G3589 Vigna mungo HOM05D002759 ORTHO05D003290 3.2e-28 132.1 265 36.2
SEGI_00066 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 3.6e-27 128.6 495 25.5
SEGI_09006 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.0e-26 127.1 495 24.8
SEGI_24894 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 3.9e-26 125.2 528 24.4
Gohir.A01G176601 Gossypium hirsutum HOM05D002759 ORTHO05D003290 3.1e-23 115.5 173 35.3
Atru.chr6.1022 Acer truncatum HOM05D002759 ORTHO05D003290 1.5e-22 113.2 78 69.2
FvH4_5g29930 Fragaria vesca HOM05D002759 ORTHO05D003290 2.6e-22 112.5 125 51.2
CARHR230000 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.9e-21 109.0 80 65.0
CARHR222380 Cardamine hirsuta HOM05D002759 ORTHO05D003290 6.5e-21 107.8 176 37.5
GSVIVG01005672001 Vitis vinifera HOM05D002759 ORTHO05D003290 6.5e-21 107.8 102 53.9
GSVIVG01011206001 Vitis vinifera HOM05D002759 ORTHO05D003290 1.6e-19 103.2 107 47.7
MD08G1226700 Malus domestica HOM05D002759 ORTHO05D003290 4.6e-19 101.7 92 56.5
SHI26609 Sapria himalayana HOM05D002759 ORTHO05D003290 1.8e-18 99.8 164 38.4
vmacro01779 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 2.3e-18 99.4 148 38.5
CBR_g18638 Chara braunii HOM05D002759 ORTHO05D003290 8.8e-18 97.4 759 22.4
Actinidia00221 Actinidia chinensis HOM05D002759 ORTHO05D003290 1.1e-17 97.1 444 25.0
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.1e-17 97.1 136 36.8
arahy.Tifrunner.gnm1.ann1.HX0PY9 Arachis hypogaea HOM05D002759 ORTHO05D003290 1.1e-17 97.1 181 34.8
SHI26605 Sapria himalayana HOM05D002759 ORTHO05D003290 2.6e-17 95.9 182 33.5
AT5G28550 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 3.3e-17 95.5 136 37.5
MD00G1111200 Malus domestica HOM05D002759 ORTHO05D003290 3.3e-17 95.5 155 36.8
Ah.07g205400 Amaranthus hybridus HOM05D002759 ORTHO05D003290 5.7e-17 94.7 79 57.0
vmacro01786 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 9.7e-17 94.0 82 58.5
MD08G1225400 Malus domestica HOM05D002759 ORTHO05D003290 4.8e-16 91.7 164 34.8
TAR629G0124 Trochodendron aralioides HOM05D002759 ORTHO05D021026 8.2e-16 90.9 147 40.1
TAR628G0627 Trochodendron aralioides HOM05D002759 ORTHO05D021026 3.1e-15 89.0 100 47.0
TAR628G1230 Trochodendron aralioides HOM05D002759 ORTHO05D021026 3.1e-15 89.0 100 47.0
CARHR284400 Cardamine hirsuta HOM05D002759 ORTHO05D003290 2.0e-14 86.3 98 43.9
RcHm_v2.0_Chr7g0223761 Rosa chinensis HOM05D002759 ORTHO05D003290 1.4e-12 80.1 63 61.9
vmacro18627 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 2.5e-12 79.3 80 47.5
CARHR284390 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.6e-11 76.6 114 40.4
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 1.0e-10 73.9 166 33.1
GSVIVG01013912001 Vitis vinifera HOM05D003578 ORTHO05D004021 1.4e-10 73.6 63 58.7
Lsat_1_v5_gn_4_7760 Lactuca sativa HOM05D002759 ORTHO05D003290 1.8e-10 73.2 62 51.6
SEGI_36049 Sequoiadendron giganteum HOM05D002759 ORTHO05D003290 1.5e-09 70.1 202 30.7
GSVIVG01038033001 Vitis vinifera HOM05D002759 ORTHO05D003290 3.3e-09 68.9 57 52.6
C04p13080 Brassica napus HOM05D002759 ORTHO05D003290 7.4e-09 67.8 76 47.4
RcHm_v2.0_Chr4g0428231 Rosa chinensis HOM05D002759 ORTHO05D020730 1.3e-08 67.0 80 41.2
FAN01G1856 Fragaria x ananassa HOM05D002759 ORTHO05D020730 2.2e-08 66.2 83 36.1
TAR636G1783 Trochodendron aralioides HOM05D002759 ORTHO05D021026 1.1e-07 63.9 39 66.7
vmacro01784 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 1.1e-07 63.9 35 80.0
FAN10G2628 Fragaria x ananassa HOM05D017399 ORTHO05D020730 4.5e-06 58.5 195 29.2
FAN10G4259 Fragaria x ananassa HOM05D017399 ORTHO05D020730 4.5e-06 58.5 195 29.2
HanXRQChr11g0344611 Helianthus annuus HOM05D002759 ORTHO05D003290 4.5e-06 58.5 183 28.4
FvH4_5g17590 Fragaria vesca HOM05D017399 ORTHO05D045498 7.7e-06 57.8 168 27.4
RcHm_v2.0_Chr4g0428261 Rosa chinensis HOM05D002759 ORTHO05D003290 7.7e-06 57.8 78 43.6


User provided reference genes

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