Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008815.1 Olea europaea HOM05D004244 ORTHO05D004964 1.9e-75 285.8 149 100.0
QL06p021978 Quercus lobata HOM05D004244 ORTHO05D004964 6.2e-26 121.3 153 49.0
Peaxi162Scf00125g01118 Petunia axillaris HOM05D004244 ORTHO05D004964 1.2e-24 117.1 157 47.8
CSS0047223 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 9.9e-24 114.0 154 51.9
CSS0047414 Camellia sinensis var. sinensis HOM05D004244 ORTHO05D004964 2.2e-23 112.8 154 51.9
Haze_11497 Corylus avellana HOM05D004244 ORTHO05D004964 6.4e-23 111.3 154 45.5
CiPaw.01G175300 Carya illinoinensis HOM05D004244 ORTHO05D004964 1.1e-22 110.5 154 45.5
Lj6g0017438 Lotus japonicus HOM05D004244 ORTHO05D004964 1.9e-22 109.8 156 47.4
Hma1.2p1_0112F.1_g054970 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 7.1e-22 107.8 156 45.5
PGSC0003DMG402001493 Solanum tuberosum HOM05D004244 ORTHO05D004964 9.3e-22 107.5 155 45.2
COL.COLO4_16006 Corchorus olitorius HOM05D004244 ORTHO05D004964 1.6e-21 106.7 153 45.1
Sopen09g033990 Solanum pennellii HOM05D004244 ORTHO05D004964 1.6e-21 106.7 155 45.8
GSVIVG01001856001 Vitis vinifera HOM05D004244 ORTHO05D004964 1.6e-21 106.7 155 49.7
Duzib052G0780 Durio zibethinus HOM05D004244 ORTHO05D004964 2.1e-21 106.3 150 42.0
Solyc09g091010.3 Solanum lycopersicum HOM05D004244 ORTHO05D004964 2.1e-21 106.3 155 45.8
Duzib052G0270 Durio zibethinus HOM05D004244 ORTHO05D004964 2.7e-21 105.9 150 42.0
Dinv27132 Davidia involucrata HOM05D004244 ORTHO05D004964 6.0e-21 104.8 153 44.4
FvH4_4g05190 Fragaria vesca HOM05D004244 ORTHO05D004964 7.8e-21 104.4 149 43.0
Ca_11893_v3 Cicer arietinum L. HOM05D004244 ORTHO05D004964 1.3e-20 103.6 149 40.9
Cfa014824 Carpinus fangiana HOM05D004244 ORTHO05D004964 1.7e-20 103.2 156 45.5
MD16G1230800 Malus domestica HOM05D004244 ORTHO05D004964 1.7e-20 103.2 151 42.4
Nitab4.5_0000451g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 3.0e-20 102.4 149 45.0
FAN12G2846 Fragaria x ananassa HOM05D004244 ORTHO05D004964 3.9e-20 102.1 149 42.3
Lalb_Chr03g0036891 Lupinus albus HOM05D004244 ORTHO05D004964 3.9e-20 102.1 149 45.0
MD13G1225800 Malus domestica HOM05D004244 ORTHO05D004964 5.1e-20 101.7 151 40.4
Medtr1g045520 Medicago truncatula HOM05D004244 ORTHO05D004964 5.1e-20 101.7 154 43.5
Prupe.1G052600 Prunus persica HOM05D004244 ORTHO05D004964 5.1e-20 101.7 147 43.5
Actinidia11381 Actinidia chinensis HOM05D004244 ORTHO05D004964 8.7e-20 100.9 155 46.5
Cc03_g06840 Coffea canephora HOM05D004244 ORTHO05D004964 1.1e-19 100.5 155 47.7
FAN17G1122 Fragaria x ananassa HOM05D004244 ORTHO05D004964 1.5e-19 100.1 149 41.6
Thecc.04G269100 Theobroma cacao HOM05D004244 ORTHO05D004964 1.5e-19 100.1 151 41.7
TPR.G23981 Trifolium pratense HOM05D004244 ORTHO05D004964 3.3e-19 99.0 150 39.3
TAR633G1781 Trochodendron aralioides HOM05D004244 ORTHO05D004964 4.3e-19 98.6 156 46.8
Aqoxy5G00098 Aquilegia oxysepala HOM05D004244 ORTHO05D004964 7.3e-19 97.8 157 43.9
Phvul.007G227000 Phaseolus vulgaris HOM05D004244 ORTHO05D004964 7.3e-19 97.8 151 43.7
VMungo0720G2410 Vigna mungo HOM05D004244 ORTHO05D004964 9.6e-19 97.4 151 43.7
arahy.Tifrunner.gnm1.ann1.9VYP7U Arachis hypogaea HOM05D004244 ORTHO05D004964 1.3e-18 97.1 151 40.4
arahy.Tifrunner.gnm1.ann1.QYR710 Arachis hypogaea HOM05D004244 ORTHO05D004964 1.3e-18 97.1 151 40.4
MBI07_g19046_MAGBIO Magnolia biondii HOM05D004244 ORTHO05D004964 2.8e-18 95.9 157 42.7
SalBow3G0496 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.8e-18 95.9 155 47.1
SalBow3G1459 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.8e-18 95.9 155 47.1
Rhsim02G0048800 Rhododendron simsii HOM05D004244 ORTHO05D004964 3.6e-18 95.5 149 41.6
GSVIVG01026322001 Vitis vinifera HOM05D004244 ORTHO05D004964 4.8e-18 95.1 150 42.7
Sabra10G0043500 Salix brachista HOM05D004244 ORTHO05D004964 1.1e-17 94.0 148 40.5
Glyma.10G132400 Glycine max HOM05D004244 ORTHO05D004964 1.4e-17 93.6 150 41.3
Potri.010G063300 Populus trichocarpa HOM05D004244 ORTHO05D004964 3.1e-17 92.4 149 38.9
Nitab4.5_0000867g0080 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.0e-17 92.0 148 40.5
Nn1g03029 Nelumbo nucifera HOM05D004244 ORTHO05D004964 9.0e-17 90.9 158 43.7
MSTRG.24646 Avicennia marina HOM05D004244 ORTHO05D004964 1.5e-16 90.1 160 46.9
Manes.03G156200 Manihot esculenta HOM05D004244 ORTHO05D004964 2.0e-16 89.7 149 40.9
Gohir.D09G232300 Gossypium hirsutum HOM05D004244 ORTHO05D004964 2.6e-16 89.4 151 41.1
Nn3g19830 Nelumbo nucifera HOM05D004244 ORTHO05D004964 4.5e-16 88.6 159 40.9
Potri.019G023400 Populus trichocarpa HOM05D004244 ORTHO05D004964 4.5e-16 88.6 152 38.2
Actinidia34761 Actinidia chinensis HOM05D004244 ORTHO05D004964 7.6e-16 87.8 153 39.9
Gorai.006G255200 Gossypium raimondii HOM05D004244 ORTHO05D004964 7.6e-16 87.8 151 40.4
CDE11G0045 Ceratophyllum demersum HOM05D004244 ORTHO05D004964 1.3e-15 87.0 156 42.9
MELO3C023072.2 Cucumis melo HOM05D004244 ORTHO05D004964 4.9e-15 85.1 164 42.1
CsaV3_2G012190 Cucumis sativus L. HOM05D004244 ORTHO05D004964 4.9e-15 85.1 164 40.2
Gohir.A09G231200 Gossypium hirsutum HOM05D004244 ORTHO05D004964 4.9e-15 85.1 151 39.1
TAR362G0565 Trochodendron aralioides HOM05D004244 ORTHO05D004964 4.9e-15 85.1 155 40.6
CANSAT78G2336 Cannabis sativa HOM05D004244 ORTHO05D004964 6.4e-15 84.7 156 39.1
ClCG06G007490 Citrullus lanatus HOM05D004244 ORTHO05D004964 6.4e-15 84.7 163 42.3
Rhsim09G0132600 Rhododendron simsii HOM05D004244 ORTHO05D004964 1.1e-14 84.0 154 38.3
Lsat_1_v5_gn_2_42020 Lactuca sativa HOM05D004244 ORTHO05D004964 2.4e-14 82.8 158 41.1
Sabra19G0033400 Salix brachista HOM05D004244 ORTHO05D004964 2.4e-14 82.8 154 39.0
Nitab4.5_0000841g0060 Nicotiana tabacum HOM05D004244 ORTHO05D004964 4.2e-14 82.0 150 38.0
Ciclev10021373m.g Citrus clementina HOM05D004244 ORTHO05D004964 5.4e-14 81.6 157 37.6
Oeu010184.1 Olea europaea HOM05D004244 ORTHO05D004964 7.1e-14 81.3 151 38.4
Nitab4.5_0008594g0020 Nicotiana tabacum HOM05D004244 ORTHO05D004964 1.6e-13 80.1 150 37.3
SGA_v2.0_scaffold398G50771 Striga asiatica HOM05D004244 ORTHO05D004964 1.6e-13 80.1 147 42.2
PSO170G0851 Papaver somniferum HOM05D004244 ORTHO05D004964 2.1e-13 79.7 153 37.3
Psat1g024120 Pisum sativum HOM05D004244 ORTHO05D004964 3.5e-13 79.0 153 38.6
PSO674G0105 Papaver somniferum HOM05D004244 ORTHO05D004964 4.6e-13 78.6 159 37.1
TWI09G1213 Tripterygium wilfordii HOM05D004244 ORTHO05D004964 6.0e-13 78.2 154 39.6
Atru.chr2.1111 Acer truncatum HOM05D004244 ORTHO05D004964 7.9e-13 77.8 165 38.2
Cpa.g.sc756.3 Carica papaya HOM05D004244 ORTHO05D004964 1.8e-12 76.6 156 34.6
Peaxi162Scf00077g00117 Petunia axillaris HOM05D004244 ORTHO05D004964 3.0e-12 75.9 154 37.7
Cc09_g03010 Coffea canephora HOM05D004244 ORTHO05D004964 3.9e-12 75.5 152 35.5
Actinidia38930 Actinidia chinensis HOM05D004244 ORTHO05D004964 5.1e-12 75.1 156 37.2
Gohir.D11G254600 Gossypium hirsutum HOM05D004244 ORTHO05D004964 5.1e-12 75.1 154 37.0
Gorai.007G273200 Gossypium raimondii HOM05D004244 ORTHO05D004964 5.1e-12 75.1 154 37.0
DCAR_030773 Daucus carota HOM05D004244 ORTHO05D004964 6.7e-12 74.7 147 37.4
Manes.08G141600 Manihot esculenta HOM05D004244 ORTHO05D004964 6.7e-12 74.7 145 37.2
Gohir.A11G244500 Gossypium hirsutum HOM05D004244 ORTHO05D004964 1.1e-11 73.9 154 36.4
Lj2C46G4 Lonicera japonica HOM05D004244 ORTHO05D004964 1.9e-11 73.2 151 38.4
PGR031G0411 Punica granatum HOM05D004244 ORTHO05D004964 1.9e-11 73.2 153 36.6
Migut.N00322 Erythranthe guttata HOM05D004244 ORTHO05D004964 3.3e-11 72.4 167 37.7
Thecc.05G266700 Theobroma cacao HOM05D004244 ORTHO05D004964 3.3e-11 72.4 153 37.3
Duzib106G0844 Durio zibethinus HOM05D004244 ORTHO05D004964 4.3e-11 72.0 152 36.8
EL10Ac3g06716 Beta vulgaris HOM05D004244 ORTHO05D004964 5.6e-11 71.6 159 38.4
Cpa.g.sc59.37 Carica papaya HOM05D004244 ORTHO05D004964 1.3e-10 70.5 152 34.2
Carub.0003s0352 Capsella rubella HOM05D004244 ORTHO05D004964 2.1e-10 69.7 153 36.6
AL3G14300 Arabidopsis lyrata HOM05D004244 ORTHO05D004964 2.8e-10 69.3 151 33.8
CAN.G4.41 Capsicum annuum HOM05D004244 ORTHO05D004964 2.8e-10 69.3 151 33.8
Eucgr.H02883 Eucalyptus grandis HOM05D004244 ORTHO05D004964 4.8e-10 68.6 151 35.8
Hma1.2p1_0130F.1_g060490 Hydrangea macrophylla HOM05D004244 ORTHO05D004964 8.1e-10 67.8 158 34.8
AT3G04310 Arabidopsis thaliana HOM05D004244 ORTHO05D004964 1.1e-09 67.4 159 35.2
Atru.chr4.1873 Acer truncatum HOM05D004244 ORTHO05D004964 4.0e-09 65.5 149 34.2
MSTRG.9217 Avicennia marina HOM05D004244 ORTHO05D004964 5.3e-09 65.1 149 33.6
Eucgr.B01738 Eucalyptus grandis HOM05D004244 ORTHO05D004964 6.9e-09 64.7 157 33.1
Aa31LG5G14830 Aethionema arabicum HOM05D004244 ORTHO05D004964 4.5e-08 62.0 150 34.0
EL10Ac4g09763 Beta vulgaris HOM05D004244 ORTHO05D004964 4.5e-08 62.0 164 32.9
BcaB04g19340 Brassica carinata HOM05D004244 ORTHO05D004964 5.8e-08 61.6 154 35.1
Carub.0004s1471 Capsella rubella HOM05D004244 ORTHO05D004964 5.8e-08 61.6 154 33.1
Sp3g03210 Schrenkiella parvula HOM05D004244 ORTHO05D004964 5.8e-08 61.6 153 34.6
PGSC0003DMG402028717 Solanum tuberosum HOM05D004244 ORTHO05D004964 5.8e-08 61.6 156 35.9
Sc09g0001820 Simmondsia chinensis HOM05D004244 ORTHO05D004964 9.9e-08 60.8 161 37.9
vmacro10383 Vaccinium macrocarpon HOM05D004244 ORTHO05D004964 1.3e-07 60.5 130 38.5
BcaC01g04379 Brassica carinata HOM05D004244 ORTHO05D004964 1.7e-07 60.1 148 32.4
HPP92_025817 Vanilla planifolia HOM05D004244 ORTHO05D004964 1.7e-07 60.1 153 33.3
Thhalv10021319m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 2.9e-07 59.3 152 33.6
CARHR078490 Cardamine hirsuta HOM05D004244 ORTHO05D004964 3.8e-07 58.9 150 30.7
C03p40780 Brassica napus HOM05D004244 ORTHO05D004964 4.9e-07 58.5 149 33.6
BolC3t16346H Brassica oleracea HOM05D004244 ORTHO05D004964 4.9e-07 58.5 149 33.6
ATR0723G041 Amborella trichopoda HOM05D004244 ORTHO05D004964 6.4e-07 58.2 157 33.8
Thhalv10017015m.g Eutrema salsugineum HOM05D004244 ORTHO05D004964 8.4e-07 57.8 156 35.3
Sp4g15550 Schrenkiella parvula HOM05D004244 ORTHO05D004964 8.4e-07 57.8 157 33.1
BraA03t12533Z Brassica rapa HOM05D004244 ORTHO05D004964 1.1e-06 57.4 152 32.9
Sopen04g021060 Solanum pennellii HOM05D004244 ORTHO05D004964 1.1e-06 57.4 156 34.0
ECA238G3737 Erigeron canadensis HOM05D004244 ORTHO05D004964 2.4e-06 56.2 96 39.6
PGR004G0368 Punica granatum HOM05D004244 ORTHO05D004964 2.4e-06 56.2 159 32.1
SalBow1G0411 Salvia bowleyana HOM05D004244 ORTHO05D004964 2.4e-06 56.2 153 30.7
Solyc04g050270.1 Solanum lycopersicum HOM05D004244 ORTHO05D004964 5.5e-06 55.1 156 32.7
SGA_v2.0_scaffold329G48831 Striga asiatica HOM05D004244 ORTHO05D004964 9.3e-06 54.3 149 30.9


User provided reference genes

Program Settings