Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008667.1 Olea europaea HOM05D004482 ORTHO05D005212 8.9e-54 213.4 110 100.0
Oeu006195.1 Olea europaea HOM05D004482 ORTHO05D005212 7.5e-45 183.7 110 88.2
Oeu013809.1 Olea europaea HOM05D004482 ORTHO05D005212 4.6e-42 174.5 104 85.6
SGA_v2.0_scaffold31G12588 Striga asiatica HOM05D004482 ORTHO05D005212 3.1e-38 161.8 104 77.9
Cc03_g07940 Coffea canephora HOM05D004482 ORTHO05D005212 1.5e-37 159.5 104 78.8
Migut.N00400 Erythranthe guttata HOM05D004482 ORTHO05D005212 2.0e-37 159.1 104 75.0
Lj3C404T0 Lonicera japonica HOM05D004482 ORTHO05D005212 2.2e-36 155.6 104 74.0
Lj3A407G37 Lonicera japonica HOM05D004482 ORTHO05D005212 1.1e-35 153.3 105 75.2
MSTRG.24610 Avicennia marina HOM05D004482 ORTHO05D005212 1.4e-35 152.9 102 75.5
COL.COLO4_20166 Corchorus olitorius HOM05D004482 ORTHO05D005212 2.4e-35 152.1 105 74.3
Hma1.2p1_0187F.1_g082340 Hydrangea macrophylla HOM05D004482 ORTHO05D005212 4.1e-35 151.4 105 71.4
GSVIVG01020907001 Vitis vinifera HOM05D004482 ORTHO05D005212 7.0e-35 150.6 104 72.1
Nitab4.5_0006210g0070 Nicotiana tabacum HOM05D004482 ORTHO05D005212 1.2e-34 149.8 102 74.5
Nitab4.5_0000401g0030 Nicotiana tabacum HOM05D004482 ORTHO05D005212 3.5e-34 148.3 101 75.2
Gohir.A02G021300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 4.6e-34 147.9 104 70.2
Gorai.005G031400 Gossypium raimondii HOM05D004482 ORTHO05D005212 4.6e-34 147.9 104 70.2
Peaxi162Scf00047g00420 Petunia axillaris HOM05D004482 ORTHO05D005212 4.6e-34 147.9 101 75.2
Gohir.D02G025500 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.0e-34 147.5 104 70.2
Gohir.D02G027400 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.0e-34 147.5 104 70.2
Solyc09g092030.4 Solanum lycopersicum HOM05D004482 ORTHO05D005212 6.0e-34 147.5 101 73.3
Sopen09g034910 Solanum pennellii HOM05D004482 ORTHO05D005212 6.0e-34 147.5 101 73.3
PGSC0003DMG400026426 Solanum tuberosum HOM05D004482 ORTHO05D005212 6.0e-34 147.5 104 73.1
Duzib151G0803 Durio zibethinus HOM05D004482 ORTHO05D005212 7.8e-34 147.1 104 70.2
Peaxi162Scf00753g00331 Petunia axillaris HOM05D004482 ORTHO05D005212 1.0e-33 146.7 101 74.3
Gohir.D02G025900 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.3e-33 146.4 104 69.2
Gohir.D02G027800 Gossypium hirsutum HOM05D004482 ORTHO05D005212 1.7e-33 146.0 104 69.2
QL06p025411 Quercus lobata HOM05D004482 ORTHO05D005212 1.7e-33 146.0 104 69.2
CAN.G1333.13 Capsicum annuum HOM05D004482 ORTHO05D005212 2.3e-33 145.6 101 72.3
Actinidia11419 Actinidia chinensis HOM05D004482 ORTHO05D005212 3.0e-33 145.2 104 67.3
Dinv27224 Davidia involucrata HOM05D004482 ORTHO05D005212 3.0e-33 145.2 104 69.2
Hund18995 Selenicereus undatus HOM05D004482 ORTHO05D005212 3.0e-33 145.2 104 65.4
Atru.chr4.1674 Acer truncatum HOM05D004482 ORTHO05D005212 3.9e-33 144.8 104 69.2
C03p21360 Brassica napus HOM05D004482 ORTHO05D005212 6.6e-33 144.1 104 68.3
CARHR126650 Cardamine hirsuta HOM05D004482 ORTHO05D005212 6.6e-33 144.1 104 69.2
Lsat_1_v5_gn_6_61160 Lactuca sativa HOM05D004482 ORTHO05D005212 6.6e-33 144.1 104 66.3
MD00G1113200 Malus domestica HOM05D004482 ORTHO05D005212 8.6e-33 143.7 104 67.3
Manes.15G054600 Manihot esculenta HOM05D004482 ORTHO05D005212 8.6e-33 143.7 104 67.3
Sc19g0007180 Simmondsia chinensis HOM05D004482 ORTHO05D005212 8.6e-33 143.7 104 69.2
Ah.11g041390 Amaranthus hybridus HOM05D004482 ORTHO05D005212 1.1e-32 143.3 105 70.5
BolC3t14519H Brassica oleracea HOM05D004482 ORTHO05D005212 1.1e-32 143.3 104 68.3
AUR62018590 Chenopodium quinoa HOM05D004482 ORTHO05D005212 1.1e-32 143.3 104 63.5
AUR62020829 Chenopodium quinoa HOM05D004482 ORTHO05D005212 1.1e-32 143.3 104 63.5
Cpa.g.sc173.9 Carica papaya HOM05D004482 ORTHO05D005212 1.5e-32 142.9 104 68.3
MELO3C020442.2 Cucumis melo HOM05D004482 ORTHO05D005212 1.5e-32 142.9 104 67.3
Thecc.04G200900 Theobroma cacao HOM05D004482 ORTHO05D005212 1.5e-32 142.9 104 67.3
A03p18310 Brassica napus HOM05D004482 ORTHO05D005212 1.9e-32 142.5 104 67.3
Rhsim02G0059000 Rhododendron simsii HOM05D004482 ORTHO05D005212 1.9e-32 142.5 104 65.4
A04p25280 Brassica napus HOM05D004482 ORTHO05D005212 3.3e-32 141.7 104 67.3
BraA04t18031Z Brassica rapa HOM05D004482 ORTHO05D005212 3.3e-32 141.7 104 67.3
TAR362G0107 Trochodendron aralioides HOM05D004482 ORTHO05D005212 3.3e-32 141.7 103 68.9
BcaC02g07886 Brassica carinata HOM05D004482 ORTHO05D005212 4.3e-32 141.4 104 67.3
BolC4t27707H Brassica oleracea HOM05D004482 ORTHO05D005212 4.3e-32 141.4 104 67.3
FvH4_4g13790 Fragaria vesca HOM05D004482 ORTHO05D005212 4.3e-32 141.4 104 67.3
FAN12G3502 Fragaria x ananassa HOM05D004482 ORTHO05D005212 4.3e-32 141.4 104 67.3
BraA03t11091Z Brassica rapa HOM05D004482 ORTHO05D005212 5.6e-32 141.0 104 66.3
Ciclev10005271m.g Citrus clementina HOM05D004482 ORTHO05D005212 5.6e-32 141.0 104 67.3
Eucgr.H02773 Eucalyptus grandis HOM05D004482 ORTHO05D005212 5.6e-32 141.0 112 62.5
Aa31LG5G4410 Aethionema arabicum HOM05D004482 ORTHO05D005212 7.3e-32 140.6 104 67.3
Cpa.g.sc443.1 Carica papaya HOM05D004482 ORTHO05D005212 7.3e-32 140.6 102 70.6
FAN17G0447 Fragaria x ananassa HOM05D004482 ORTHO05D005212 7.3e-32 140.6 104 67.3
MD04G1010600 Malus domestica HOM05D004482 ORTHO05D005212 7.3e-32 140.6 104 66.3
arahy.Tifrunner.gnm1.ann1.ENCW2M Arachis hypogaea HOM05D004482 ORTHO05D005212 9.5e-32 140.2 104 66.3
Duzib212G0483 Durio zibethinus HOM05D004482 ORTHO05D005212 9.5e-32 140.2 105 68.6
ECA233G3015 Erigeron canadensis HOM05D004482 ORTHO05D005212 9.5e-32 140.2 104 65.4
Thhalv10016939m.g Eutrema salsugineum HOM05D004482 ORTHO05D005212 9.5e-32 140.2 104 67.3
Lalb_Chr07g0186731 Lupinus albus HOM05D004482 ORTHO05D005212 9.5e-32 140.2 104 67.3
RcHm_v2.0_Chr4g0414711 Rosa chinensis HOM05D004482 ORTHO05D005212 9.5e-32 140.2 104 66.3
Carub.0004s1412 Capsella rubella HOM05D004482 ORTHO05D005212 1.2e-31 139.8 104 67.3
Cfa014938 Carpinus fangiana HOM05D004482 ORTHO05D005212 1.2e-31 139.8 104 67.3
CsaV3_2G011600 Cucumis sativus L. HOM05D004482 ORTHO05D005212 1.2e-31 139.8 104 65.4
DCAR_012443 Daucus carota HOM05D004482 ORTHO05D005212 1.2e-31 139.8 104 66.3
FAN07G1054 Fragaria x ananassa HOM05D004482 ORTHO05D005212 1.2e-31 139.8 105 64.8
HanXRQChr02g0059021 Helianthus annuus HOM05D004482 ORTHO05D005212 1.2e-31 139.8 104 65.4
PGR083G2076 Punica granatum HOM05D004482 ORTHO05D005212 1.6e-31 139.4 105 70.5
arahy.Tifrunner.gnm1.ann1.R808EC Arachis hypogaea HOM05D004482 ORTHO05D005212 2.1e-31 139.0 104 65.4
HanXRQChr16g0497991 Helianthus annuus HOM05D004482 ORTHO05D005212 2.8e-31 138.7 104 65.4
Prupe.1G010300 Prunus persica HOM05D004482 ORTHO05D005212 2.8e-31 138.7 104 65.4
Sp4g15100 Schrenkiella parvula HOM05D004482 ORTHO05D005212 2.8e-31 138.7 104 66.3
AL4G28200 Arabidopsis lyrata HOM05D004482 ORTHO05D005212 3.6e-31 138.3 104 64.4
AT2G32760 Arabidopsis thaliana HOM05D004482 ORTHO05D005212 3.6e-31 138.3 104 65.4
Duzib212G1026 Durio zibethinus HOM05D004482 ORTHO05D005212 3.6e-31 138.3 105 67.6
TPR.G11944 Trifolium pratense HOM05D004482 ORTHO05D005212 3.6e-31 138.3 104 64.4
Lj4g0012954 Lotus japonicus HOM05D004482 ORTHO05D005212 4.7e-31 137.9 104 65.4
THA.LOC104826120 Tarenaya hassleriana HOM05D004482 ORTHO05D005212 4.7e-31 137.9 105 67.6
EL10Ac4g09020 Beta vulgaris HOM05D004482 ORTHO05D005212 6.2e-31 137.5 104 62.5
ClCG06G007870 Citrullus lanatus HOM05D004482 ORTHO05D005212 1.4e-30 136.3 104 64.4
PSO339G2282 Papaver somniferum HOM05D004482 ORTHO05D005212 1.4e-30 136.3 99 68.7
Aqoxy2G00031 Aquilegia oxysepala HOM05D004482 ORTHO05D005212 1.8e-30 136.0 103 63.1
CiPaw.01G120200 Carya illinoinensis HOM05D004482 ORTHO05D005212 1.8e-30 136.0 104 67.3
PSO384G1658 Papaver somniferum HOM05D004482 ORTHO05D005212 2.3e-30 135.6 99 68.7
vmacro15546 Vaccinium macrocarpon HOM05D004482 ORTHO05D005212 3.1e-30 135.2 104 65.4
Medtr8g085350 Medicago truncatula HOM05D004482 ORTHO05D005212 4.0e-30 134.8 104 63.5
Potri.017G056800 Populus trichocarpa HOM05D004482 ORTHO05D005212 8.9e-30 133.7 106 68.9
Sed0016107 Sechium edule HOM05D004482 ORTHO05D005212 8.9e-30 133.7 104 66.3
HPP92_017061 Vanilla planifolia HOM05D004482 ORTHO05D005212 1.2e-29 133.3 103 65.0
Psat7g074240 Pisum sativum HOM05D004482 ORTHO05D005212 2.0e-29 132.5 104 62.5
Ca_17968_v3 Cicer arietinum L. HOM05D004482 ORTHO05D005212 2.6e-29 132.1 104 66.3
Gohir.A09G205700 Gossypium hirsutum HOM05D004482 ORTHO05D005212 2.6e-29 132.1 106 62.3
MBI19_g24366_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 2.6e-29 132.1 103 67.0
Sed0019182 Sechium edule HOM05D004482 ORTHO05D005212 3.4e-29 131.7 104 63.5
Glyma.05G154100 Glycine max HOM05D004482 ORTHO05D005212 4.4e-29 131.3 104 65.4
MBI19_g24734_MAGBIO Magnolia biondii HOM05D004482 ORTHO05D005212 5.8e-29 131.0 103 65.0
Glyma.08G111900 Glycine max HOM05D004482 ORTHO05D005212 7.5e-29 130.6 104 64.4
unitig_8.g4998 Utricularia gibba HOM05D004482 ORTHO05D005212 7.5e-29 130.6 104 67.3
Gohir.D09G199300 Gossypium hirsutum HOM05D004482 ORTHO05D005212 9.9e-29 130.2 107 62.6
Lalb_Chr21g0313021 Lupinus albus HOM05D004482 ORTHO05D005212 1.7e-28 129.4 104 62.5
Gorai.006G223000 Gossypium raimondii HOM05D004482 ORTHO05D005212 2.2e-28 129.0 105 62.9
Peaxi162Scf61983g00004 Petunia axillaris HOM05D004482 ORTHO05D005212 2.9e-28 128.6 90 74.4
TWI73G1291 Tripterygium wilfordii HOM05D004482 ORTHO05D005212 3.7e-28 128.3 104 62.5
ECA238G0855 Erigeron canadensis HOM05D000097 ORTHO05D000041 4.9e-28 127.9 102 61.8
ATR1096G138 Amborella trichopoda HOM05D004482 ORTHO05D005212 1.1e-27 126.7 100 68.0
CANSAT78G1841 Cannabis sativa HOM05D004482 ORTHO05D005212 2.4e-27 125.6 105 60.0
Phvul.003G290900 Phaseolus vulgaris HOM05D004482 ORTHO05D005212 7.1e-27 124.0 104 61.5
SEGI_24214 Sequoiadendron giganteum HOM05D004482 ORTHO05D005212 9.2e-27 123.6 103 59.2
C04p62340 Brassica napus HOM05D000474 ORTHO05D005212 1.6e-26 122.9 127 52.8
Nn3g19571 Nelumbo nucifera HOM05D004482 ORTHO05D005212 2.7e-26 122.1 103 60.2
Os06g0715000 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 3.5e-26 121.7 100 61.0
Haze_11622 Corylus avellana HOM05D004482 ORTHO05D005212 6.0e-26 120.9 143 49.0
VMungo0251G0011 Vigna mungo HOM05D004482 ORTHO05D005212 1.3e-25 119.8 101 63.4
Lsat_1_v5_gn_2_46161 Lactuca sativa HOM05D004482 ORTHO05D005212 3.0e-25 118.6 102 57.8
CDE08G1272 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 5.1e-25 117.9 102 62.7
Zm00001eb405320 Zea mays HOM05D004482 ORTHO05D005212 6.6e-25 117.5 100 60.0
BcaB06g28632 Brassica carinata HOM05D004482 ORTHO05D005212 7.3e-24 114.0 104 59.6
CDE09G1401 Ceratophyllum demersum HOM05D004482 ORTHO05D005212 9.5e-24 113.6 102 60.8
Mapoly0173s0024 Marchantia polymorpha HOM05D004482 ORTHO05D005212 5.2e-22 107.8 96 57.3
Nn3g19999 Nelumbo nucifera HOM05D004482 ORTHO05D005212 1.5e-21 106.3 99 59.6
FAN22G1791 Fragaria x ananassa HOM05D004482 ORTHO05D005212 1.4e-19 99.8 78 66.7
Pp3c14_26480 Physcomitrium patens HOM05D004482 ORTHO05D005212 1.2e-18 96.7 94 53.2
DCAR_001940 Daucus carota HOM05D004482 ORTHO05D005212 3.5e-18 95.1 76 64.5
Sabra17G0048500 Salix brachista HOM05D004482 ORTHO05D005212 4.6e-18 94.7 79 59.5
Sabra17G0050200 Salix brachista HOM05D004482 ORTHO05D005212 4.6e-18 94.7 79 59.5
Gohir.D02G025833 Gossypium hirsutum HOM05D004482 ORTHO05D005212 6.0e-18 94.4 75 65.3
AagrBONN_evm.TU.Sc2ySwM_228.2912 Anthoceros agrestis HOM05D004482 ORTHO05D005212 1.0e-17 93.6 103 50.5
HanXRQChr10g0277641 Helianthus annuus HOM05D004482 ORTHO05D005212 5.1e-17 91.3 111 48.6
SMO334G0086 Selaginella moellendorffii HOM05D004482 ORTHO05D005212 3.3e-16 88.6 98 46.9
Os05g0490500 Oryza sativa ssp. japonica HOM05D004482 ORTHO05D005212 4.3e-16 88.2 95 49.5
BcaNung06790 Brassica carinata HOM05D004482 ORTHO05D005212 9.6e-16 87.0 52 75.0
Dinv38218 Davidia involucrata HOM05D004482 ORTHO05D005212 9.6e-16 87.0 51 78.4
CBR_g30986 Chara braunii HOM05D000019 ORTHO05D000048 4.0e-14 81.6 108 45.4
MCO09G655 Micromonas commoda HOM05D004482 ORTHO05D005212 7.3e-08 60.8 123 35.0


User provided reference genes

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