Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008578.1 Olea europaea HOM05D007030 ORTHO05D009159 7.8e-258 893.3 447 100.0
Lj5A191G48 Lonicera japonica HOM05D007030 ORTHO05D009159 5.5e-211 737.6 435 81.4
Sopen11g019320 Solanum pennellii HOM05D007030 ORTHO05D009159 1.2e-210 736.5 425 84.0
PGSC0003DMG400009584 Solanum tuberosum HOM05D007030 ORTHO05D009159 7.9e-210 733.8 428 83.4
vmacro02066 Vaccinium macrocarpon HOM05D007030 ORTHO05D009159 3.3e-208 728.4 427 82.4
Dinv23472 Davidia involucrata HOM05D007030 ORTHO05D009159 7.4e-208 727.2 430 81.4
Manes.04G085100 Manihot esculenta HOM05D007030 ORTHO05D009159 7.4e-208 727.2 429 80.4
Nitab4.5_0003006g0030 Nicotiana tabacum HOM05D007030 ORTHO05D009159 1.7e-207 726.1 426 82.6
Migut.B00189 Erythranthe guttata HOM05D007030 ORTHO05D009159 6.3e-207 724.2 432 81.9
Cc02_g17050 Coffea canephora HOM05D007030 ORTHO05D009159 1.4e-206 723.0 439 80.0
Rhsim11G0182100 Rhododendron simsii HOM05D007030 ORTHO05D009159 3.1e-206 721.8 435 80.7
Nitab4.5_0001413g0070 Nicotiana tabacum HOM05D007030 ORTHO05D009159 4.1e-206 721.5 426 82.6
GSVIVG01024202001 Vitis vinifera HOM05D007030 ORTHO05D009159 4.1e-206 721.5 433 80.6
MD10G1065800 Malus domestica HOM05D007030 ORTHO05D009159 5.3e-206 721.1 439 79.0
Ciclev10028302m.g Citrus clementina HOM05D007030 ORTHO05D009159 1.5e-205 719.5 431 79.1
CSS0044633 Camellia sinensis var. sinensis HOM05D007030 ORTHO05D009159 5.9e-205 717.6 429 80.0
SalBow6G2462 Salvia bowleyana HOM05D007030 ORTHO05D009159 5.0e-204 714.5 429 80.4
TWI31G0693 Tripterygium wilfordii HOM05D007030 ORTHO05D009159 8.5e-204 713.8 428 79.4
Prupe.8G087700 Prunus persica HOM05D007030 ORTHO05D009159 3.2e-203 711.8 438 78.8
FAN20G0390 Fragaria x ananassa HOM05D007030 ORTHO05D009159 9.4e-203 710.3 425 80.2
ECA246G1002 Erigeron canadensis HOM05D007030 ORTHO05D009159 2.7e-202 708.8 424 79.7
RcHm_v2.0_Chr6g0267041 Rosa chinensis HOM05D007030 ORTHO05D009159 2.3e-201 705.7 425 79.5
CAN.G341.5 Capsicum annuum HOM05D007030 ORTHO05D009159 3.0e-201 705.3 447 78.3
FAN15G3154 Fragaria x ananassa HOM05D007030 ORTHO05D009159 1.1e-200 703.4 425 79.3
Nn6g32211 Nelumbo nucifera HOM05D007030 ORTHO05D009159 1.1e-200 703.4 423 79.2
Potri.009G122300 Populus trichocarpa HOM05D007030 ORTHO05D009159 5.7e-200 701.0 430 78.1
Eucgr.I01312 Eucalyptus grandis HOM05D007030 ORTHO05D009159 9.7e-200 700.3 429 78.6
FAN24G1057 Fragaria x ananassa HOM05D007030 ORTHO05D009159 2.2e-199 699.1 425 78.6
QL11p045675 Quercus lobata HOM05D007030 ORTHO05D009159 2.8e-199 698.7 457 74.4
CiPaw.05G072000 Carya illinoinensis HOM05D007030 ORTHO05D009159 1.4e-198 696.4 433 76.9
Gohir.D13G029100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 3.1e-198 695.3 430 77.4
PGR142G2744 Punica granatum HOM05D007030 ORTHO05D009159 2.0e-197 692.6 419 78.8
Cpa.g.sc150.40 Carica papaya HOM05D007030 ORTHO05D009159 2.6e-197 692.2 445 76.2
HanXRQChr15g0479121 Helianthus annuus HOM05D007030 ORTHO05D009159 1.3e-196 689.9 421 78.4
Haze_02305 Corylus avellana HOM05D007030 ORTHO05D009159 1.7e-196 689.5 454 73.6
CANSAT11G0427 Cannabis sativa HOM05D007030 ORTHO05D009159 2.2e-196 689.1 460 73.3
THA.LOC104824797 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.0e-196 688.0 425 76.7
Sp4g00540 Schrenkiella parvula HOM05D007030 ORTHO05D009159 3.2e-195 685.3 425 76.0
BcaNung06994 Brassica carinata HOM05D007030 ORTHO05D009159 4.2e-195 684.9 424 76.2
MBI05_g05431_MAGBIO Magnolia biondii HOM05D007030 ORTHO05D009159 5.5e-195 684.5 428 76.6
TAR381G1513 Trochodendron aralioides HOM05D007030 ORTHO05D009159 5.5e-195 684.5 425 77.4
Gorai.013G033100 Gossypium raimondii HOM05D007030 ORTHO05D009159 1.0e-193 680.2 472 71.0
BraA09t41218Z Brassica rapa HOM05D007030 ORTHO05D009159 1.8e-193 679.5 424 75.9
DCAR_022800 Daucus carota HOM05D007030 ORTHO05D009159 1.8e-193 679.5 426 76.3
BcaNung06382 Brassica carinata HOM05D007030 ORTHO05D009159 2.3e-193 679.1 422 75.8
CsaV3_2G015180 Cucumis sativus L. HOM05D007030 ORTHO05D009159 5.2e-193 677.9 426 76.5
C08p41600 Brassica napus HOM05D007030 ORTHO05D009159 1.5e-192 676.4 422 75.6
Hund06268 Selenicereus undatus HOM05D007030 ORTHO05D009159 1.5e-192 676.4 421 76.2
Thhalv10000118m.g Eutrema salsugineum HOM05D007030 ORTHO05D009159 2.0e-192 676.0 422 76.1
BolC8t51722H Brassica oleracea HOM05D007030 ORTHO05D009159 3.3e-192 675.2 422 75.6
Lj3g0022597 Lotus japonicus HOM05D007030 ORTHO05D009159 7.4e-192 674.1 421 76.7
AL4G10540 Arabidopsis lyrata HOM05D007030 ORTHO05D009159 1.3e-191 673.3 420 75.7
Gohir.A13G031100 Gossypium hirsutum HOM05D007030 ORTHO05D009159 1.1e-190 670.2 426 76.5
Lalb_Chr01g0002251 Lupinus albus HOM05D007030 ORTHO05D009159 3.1e-190 668.7 420 76.4
Aqoxy5G01506 Aquilegia oxysepala HOM05D007030 ORTHO05D009159 5.3e-190 667.9 421 75.8
Phvul.011G040600 Phaseolus vulgaris HOM05D007030 ORTHO05D009159 2.0e-189 666.0 422 75.4
Medtr4g071230 Medicago truncatula HOM05D007030 ORTHO05D009159 7.7e-189 664.1 441 72.8
EL10Ac9g21613 Beta vulgaris HOM05D007030 ORTHO05D009159 3.8e-188 661.8 422 75.6
Glyma.11G112600 Glycine max HOM05D007030 ORTHO05D009159 6.5e-188 661.0 429 73.4
AUR62010413 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.9e-187 659.4 420 75.7
SGA_v2.0_scaffold58G20475 Striga asiatica HOM05D007030 ORTHO05D009159 4.7e-186 654.8 431 75.4
Actinidia11760 Actinidia chinensis HOM05D007030 ORTHO05D009159 1.4e-185 653.3 429 74.8
arahy.Tifrunner.gnm1.ann1.X71KKA Arachis hypogaea HOM05D007030 ORTHO05D009159 1.5e-184 649.8 426 73.5
Lsat_1_v5_gn_3_43860 Lactuca sativa HOM05D007030 ORTHO05D009159 8.2e-183 644.0 439 72.0
COL.COLO4_26024 Corchorus olitorius HOM05D007030 ORTHO05D009159 2.7e-181 639.0 453 69.5
FvH4_2g10090 Fragaria vesca HOM05D007030 ORTHO05D009159 1.7e-180 636.3 381 80.1
Ca_20921_v3 Cicer arietinum L. HOM05D007030 ORTHO05D009159 3.2e-179 632.1 436 70.9
ClCG11G003990 Citrullus lanatus HOM05D007030 ORTHO05D009159 3.2e-179 632.1 483 67.1
Thecc.02G077800 Theobroma cacao HOM05D007030 ORTHO05D009159 6.1e-178 627.9 380 79.5
CARHR112250 Cardamine hirsuta HOM05D007030 ORTHO05D009159 1.4e-177 626.7 387 76.7
Carub.0004s0040 Capsella rubella HOM05D007030 ORTHO05D009159 1.7e-175 619.8 388 76.0
Hma1.2p1_0851F.1_g228290 Hydrangea macrophylla HOM05D007030 ORTHO05D009159 2.2e-175 619.4 431 73.1
Sed0020159 Sechium edule HOM05D007030 ORTHO05D009159 2.8e-175 619.0 382 77.5
MELO3C023343.2 Cucumis melo HOM05D007030 ORTHO05D009159 8.3e-175 617.5 381 77.7
AT2G21370 Arabidopsis thaliana HOM05D007030 ORTHO05D009159 9.1e-174 614.0 380 76.1
arahy.Tifrunner.gnm1.ann1.EU2PQ7 Arachis hypogaea HOM05D007030 ORTHO05D009159 9.1e-174 614.0 441 69.2
PSO210G4381 Papaver somniferum HOM05D007030 ORTHO05D009159 1.5e-168 596.7 422 69.7
Atru.chr5.3113 Acer truncatum HOM05D007030 ORTHO05D009159 6.3e-167 591.3 338 83.4
ATR0661G201 Amborella trichopoda HOM05D007030 ORTHO05D009159 1.4e-161 573.5 429 66.4
AUR62016803 Chenopodium quinoa HOM05D007030 ORTHO05D009159 1.4e-161 573.5 423 69.0
TPR.G16229 Trifolium pratense HOM05D007030 ORTHO05D009159 8.9e-161 570.9 401 68.8
VMungo1127G1504 Vigna mungo HOM05D007030 ORTHO05D009159 4.6e-157 558.5 424 65.8
Aa31LG7G15160 Aethionema arabicum HOM05D007030 ORTHO05D009159 3.9e-156 555.4 352 75.3
Zm00001eb094750 Zea mays HOM05D007030 ORTHO05D009159 6.6e-156 554.7 399 68.2
Psat7g182480 Pisum sativum HOM05D007030 ORTHO05D009159 2.5e-155 552.7 360 72.8
SMO115G0266 Selaginella moellendorffii HOM05D007030 ORTHO05D009159 1.4e-153 547.0 419 62.3
Mapoly0010s0072 Marchantia polymorpha HOM05D007030 ORTHO05D009159 5.2e-153 545.0 419 62.8
Duzib052G0475 Durio zibethinus HOM05D007030 ORTHO05D009159 4.4e-152 542.0 429 64.6
BcaNung06381 Brassica carinata HOM05D007030 ORTHO05D009159 1.5e-144 516.9 326 74.5
Sc14g0001940 Simmondsia chinensis HOM05D007030 ORTHO05D009159 2.0e-144 516.5 319 78.4
unitig_744.g24262 Utricularia gibba HOM05D007030 ORTHO05D009159 3.9e-140 502.3 430 60.2
CDE09G0328 Ceratophyllum demersum HOM05D007030 ORTHO05D009159 1.1e-126 457.6 426 57.0
Peaxi162Scf00684g00133 Petunia axillaris HOM05D007030 ORTHO05D009159 1.3e-114 417.5 247 79.8
Cre02.g098150 Chlamydomonas reinhardtii HOM05D007030 ORTHO05D009159 1.1e-113 414.5 462 46.8
Os07g0409200 Oryza sativa ssp. japonica HOM05D007030 ORTHO05D009159 5.8e-104 382.1 246 72.0
MCO15G291 Micromonas commoda HOM05D007030 ORTHO05D009159 5.0e-95 352.4 440 45.0
Solyc11g042950.1 Solanum lycopersicum HOM05D007030 ORTHO05D009159 1.4e-89 334.3 202 77.2
Haze_02254 Corylus avellana HOM05D007030 ORTHO05D009159 1.8e-89 334.0 298 58.1
Haze_02264 Corylus avellana HOM05D007030 ORTHO05D009159 6.9e-89 332.0 298 58.1
AagrBONN_evm.TU.Sc2ySwM_117.2558 Anthoceros agrestis HOM05D007030 ORTHO05D009159 3.3e-83 313.2 262 57.3
RcHm_v2.0_Chr4g0423361 Rosa chinensis HOM05D007030 ORTHO05D009159 5.9e-80 302.4 223 70.0
Haze_02269 Corylus avellana HOM05D007030 ORTHO05D009159 5.3e-73 279.3 211 65.9
THA.LOC104804536 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 6.3e-66 255.8 179 68.2
PRCOL_00006836 Prasinoderma coloniale HOM05D007030 ORTHO05D009159 1.2e-61 241.5 436 39.0
RcHm_v2.0_Chr3g0496591 Rosa chinensis HOM05D007030 ORTHO05D009159 2.7e-61 240.4 307 49.2
TPR.G30522 Trifolium pratense HOM05D007030 ORTHO05D000007 5.2e-52 209.5 164 61.6
PGSC0003DMG400009674 Solanum tuberosum HOM05D007030 ORTHO05D028676 4.0e-36 156.8 88 88.6
THA.LOC104804117 Tarenaya hassleriana HOM05D007030 ORTHO05D009159 5.2e-36 156.4 109 67.0
arahy.Tifrunner.gnm1.ann1.L6T79S Arachis hypogaea HOM05D007030 ORTHO05D009159 2.6e-35 154.1 93 77.4
Glyma.12G038500 Glycine max HOM05D007030 ORTHO05D028676 4.0e-28 130.2 89 70.8
CDE09G1160 Ceratophyllum demersum HOM05D007030 ORTHO05D028676 2.9e-18 97.4 58 77.6
QL11p045724 Quercus lobata HOM05D007030 ORTHO05D028676 2.0e-11 74.7 42 85.7
Aa31LG7G15150 Aethionema arabicum HOM05D007030 ORTHO05D009159 2.1e-08 64.7 39 71.8
AagrBONN_evm.TU.Sc2ySwM_228.1076 Anthoceros agrestis HOM05D001656 ORTHO05D005043 6.0e-08 63.2 246 24.4


User provided reference genes

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