Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008479.1 Olea europaea HOM05D005172 ORTHO05D006324 1.4e-104 382.9 182 100.0
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 3.8e-62 241.9 280 47.5
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 1.9e-61 239.6 281 47.0
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 2.5e-61 239.2 281 46.6
Nitab4.5_0003540g0100 Nicotiana tabacum HOM05D005172 ORTHO05D006324 1.2e-55 220.3 143 69.9
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 1.2e-55 220.3 271 43.9
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 2.0e-55 219.5 143 70.6
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 4.6e-55 218.4 143 70.6
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 4.6e-55 218.4 143 70.6
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 7.8e-55 217.6 280 44.6
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 5.0e-54 214.9 143 69.9
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 1.5e-53 213.4 276 42.8
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 3.3e-53 212.2 146 69.2
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 3.6e-52 208.8 280 41.8
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 8.0e-52 207.6 144 64.6
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 8.0e-52 207.6 144 65.3
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 5.2e-51 204.9 142 66.2
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 5.2e-51 204.9 144 62.5
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 6.8e-51 204.5 282 41.8
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 6.8e-51 204.5 144 63.2
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 2.0e-50 203.0 144 63.9
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 2.6e-50 202.6 282 42.2
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 2.6e-50 202.6 144 62.5
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 4.4e-50 201.8 144 63.9
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 5.8e-50 201.4 277 41.2
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 5.8e-50 201.4 280 41.1
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 9.8e-50 200.7 131 71.0
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 9.8e-50 200.7 144 61.1
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 2.2e-49 199.5 144 64.6
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 2.9e-49 199.1 131 70.2
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 3.7e-49 198.7 144 65.3
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 3.7e-49 198.7 147 63.3
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 6.4e-49 198.0 144 64.6
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 6.4e-49 198.0 144 64.6
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 6.4e-49 198.0 281 40.6
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 8.3e-49 197.6 141 63.1
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 1.1e-48 197.2 278 40.3
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 1.4e-48 196.8 144 62.5
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 1.4e-48 196.8 131 70.2
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 1.4e-48 196.8 145 64.1
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 1.4e-48 196.8 144 63.9
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 2.4e-48 196.1 144 59.7
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.4e-48 196.1 281 40.2
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.4e-48 196.1 281 40.2
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 3.2e-48 195.7 144 61.1
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 4.1e-48 195.3 142 62.0
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 4.1e-48 195.3 144 63.2
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 1.2e-47 193.7 141 61.7
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 1.2e-47 193.7 143 64.3
Rhsim11G0096600 Rhododendron simsii HOM05D005172 ORTHO05D006324 1.6e-47 193.4 142 60.6
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 4.6e-47 191.8 148 59.5
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 6.0e-47 191.4 279 39.4
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 7.8e-47 191.0 144 62.5
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 1.3e-46 190.3 141 62.4
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 1.3e-46 190.3 144 61.8
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 1.3e-46 190.3 141 61.7
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 1.7e-46 189.9 141 61.0
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 2.3e-46 189.5 265 40.4
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 3.9e-46 188.7 144 59.7
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 5.0e-46 188.3 144 60.4
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 5.0e-46 188.3 141 61.0
Ciclev10023330m.g Citrus clementina HOM05D005172 ORTHO05D006324 6.6e-46 188.0 145 62.1
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 1.1e-45 187.2 141 60.3
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 1.1e-45 187.2 147 58.5
Manes.05G006214 Manihot esculenta HOM05D005172 ORTHO05D006324 1.9e-45 186.4 276 39.5
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 1.9e-45 186.4 276 39.5
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 2.5e-45 186.0 144 61.1
Manes.05G008035 Manihot esculenta HOM05D005172 ORTHO05D006324 2.5e-45 186.0 276 39.5
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 3.3e-45 185.7 144 61.1
TPR.G38637 Trifolium pratense HOM05D005172 ORTHO05D006324 3.3e-45 185.7 147 57.8
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 4.3e-45 185.3 145 61.4
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 4.3e-45 185.3 147 59.2
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 4.3e-45 185.3 276 39.5
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 5.6e-45 184.9 145 57.9
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 5.6e-45 184.9 276 39.1
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 5.6e-45 184.9 149 57.7
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 7.3e-45 184.5 145 56.6
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 7.3e-45 184.5 143 56.6
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 9.5e-45 184.1 325 36.9
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 9.5e-45 184.1 276 39.1
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 9.5e-45 184.1 140 60.7
Manes.05G012891 Manihot esculenta HOM05D005172 ORTHO05D006324 2.1e-44 183.0 276 39.1
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 4.7e-44 181.8 269 38.7
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 4.7e-44 181.8 145 57.2
Lalb_Chr06g0166951 Lupinus albus HOM05D005172 ORTHO05D006324 4.7e-44 181.8 148 56.1
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 8.1e-44 181.0 145 55.9
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 1.4e-43 180.3 128 60.9
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 1.4e-43 180.3 130 66.2
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 1.4e-43 180.3 145 55.2
Cpa.g.sc18.70 Carica papaya HOM05D005172 ORTHO05D006324 1.8e-43 179.9 143 58.7
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 1.8e-43 179.9 144 55.6
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 2.3e-43 179.5 126 61.1
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 3.1e-43 179.1 141 58.2
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 3.1e-43 179.1 247 41.3
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 4.0e-43 178.7 147 55.8
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.2e-42 177.2 145 57.9
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 2.0e-42 176.4 143 58.0
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 4.4e-42 175.3 280 37.5
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 5.8e-42 174.9 142 56.3
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 7.5e-42 174.5 129 62.0
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 1.3e-41 173.7 143 55.2
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 1.3e-41 173.7 265 38.1
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 4.1e-40 168.7 130 61.5
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 7.1e-40 167.9 143 53.8
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 1.2e-39 167.2 143 53.1
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 1.2e-39 167.2 143 53.1
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 1.2e-39 167.2 143 53.1
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 1.6e-39 166.8 143 51.7
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 2.1e-39 166.4 143 53.8
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 3.5e-39 165.6 143 51.7
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 3.5e-39 165.6 142 52.8
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 4.6e-39 165.2 143 53.1
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 4.6e-39 165.2 143 52.4
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 1.0e-38 164.1 99 73.7
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 1.3e-38 163.7 143 51.0
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 2.3e-38 162.9 281 34.2
Nitab4.5_0006240g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 2.3e-38 162.9 224 42.9
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 1.2e-36 157.1 119 62.2
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 3.4e-34 149.1 92 68.5
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 3.3e-29 132.5 126 49.2
CAN.G1071.4 Capsicum annuum HOM05D005172 ORTHO05D006324 3.8e-25 119.0 99 56.6
COL.COLO4_23213 Corchorus olitorius HOM05D005172 ORTHO05D006324 6.4e-25 118.2 100 54.0
unitig_0.g2227 Utricularia gibba HOM05D005172 ORTHO05D003916 1.1e-24 117.5 74 66.2
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 3.2e-24 115.9 142 41.5
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 5.4e-24 115.2 142 40.8
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 9.6e-21 104.4 129 41.1
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 8.1e-20 101.3 141 36.2
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.1e-19 100.9 64 68.8
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 1.5e-18 97.1 97 46.4
CBR_g51501 Chara braunii HOM05D005172 ORTHO05D006324 4.5e-18 95.5 174 37.9
SMO163G0002 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 2.9e-17 92.8 81 46.9
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 3.0e-14 82.8 50 70.0
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 6.2e-12 75.1 44 70.5
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 4.6e-07 58.9 51 52.9


User provided reference genes

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