Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008428.1 Olea europaea HOM05D006225 ORTHO05D007676 1.3e-85 319.7 164 100.0
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 3.0e-50 202.2 119 88.2
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 2.0e-49 199.5 216 55.6
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 2.2e-48 196.1 203 54.7
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 4.9e-48 194.9 212 55.7
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 2.4e-47 192.6 212 53.3
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 3.1e-47 192.2 212 53.8
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 7.0e-47 191.0 212 53.3
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 9.2e-47 190.7 228 49.6
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 1.6e-46 189.9 209 53.6
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 2.3e-45 186.0 212 53.8
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 5.0e-45 184.9 209 55.0
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 8.6e-45 184.1 209 53.1
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 8.6e-45 184.1 214 51.9
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 3.3e-44 182.2 211 51.7
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 7.3e-44 181.0 211 51.7
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 7.3e-44 181.0 211 51.7
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 7.3e-44 181.0 211 51.7
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 9.5e-44 180.6 205 53.2
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 9.5e-44 180.6 211 51.7
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 1.2e-43 180.3 214 50.9
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 1.6e-43 179.9 124 73.4
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 6.1e-43 177.9 212 52.8
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 6.1e-43 177.9 212 51.9
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 8.0e-43 177.6 212 50.9
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 8.9e-42 174.1 212 50.9
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 1.2e-41 173.7 212 49.5
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.2e-41 173.7 212 48.6
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 2.6e-41 172.6 212 49.5
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 4.4e-41 171.8 184 53.3
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 5.8e-41 171.4 212 50.0
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 7.5e-41 171.0 213 52.6
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 7.5e-41 171.0 213 52.6
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 1.7e-40 169.9 212 48.6
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.2e-40 169.5 212 49.5
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 8.3e-40 167.5 212 48.6
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 1.1e-39 167.2 129 69.8
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.1e-39 167.2 126 68.3
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.8e-39 166.4 126 70.6
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 2.4e-39 166.0 212 48.6
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.4e-39 166.0 212 48.6
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 3.2e-39 165.6 214 48.6
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 4.1e-39 165.2 176 54.5
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 5.4e-39 164.9 208 49.5
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 2.0e-38 162.9 184 53.3
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 2.0e-38 162.9 212 47.6
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 4.6e-38 161.8 223 47.5
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 6.0e-38 161.4 215 49.8
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 7.8e-38 161.0 183 53.0
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 7.8e-38 161.0 232 45.7
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.3e-37 160.2 206 50.0
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 2.3e-37 159.5 210 47.6
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 3.0e-37 159.1 184 52.2
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 3.0e-37 159.1 172 53.5
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 3.9e-37 158.7 206 50.0
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 3.9e-37 158.7 212 47.2
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 6.6e-37 157.9 210 47.1
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.1e-36 157.1 263 41.8
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 1.1e-36 157.1 199 50.3
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 4.3e-36 155.2 129 65.9
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 4.3e-36 155.2 129 65.9
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 4.3e-36 155.2 129 64.3
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 5.6e-36 154.8 129 65.9
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 9.5e-36 154.1 211 46.0
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 1.6e-35 153.3 214 46.3
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 3.6e-35 152.1 185 50.8
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 4.7e-35 151.8 129 63.6
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 6.2e-35 151.4 214 44.9
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 1.1e-34 150.6 129 62.0
Haze_14153 Corylus avellana HOM05D006225 ORTHO05D007676 1.1e-34 150.6 120 70.0
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 1.4e-34 150.2 130 62.3
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.4e-34 150.2 130 61.5
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 1.4e-34 150.2 130 61.5
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 1.4e-34 150.2 130 61.5
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 1.4e-34 150.2 130 61.5
arahy.Tifrunner.gnm1.ann1.80Z7L9 Arachis hypogaea HOM05D006225 ORTHO05D007676 6.8e-34 147.9 282 38.3
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 8.9e-34 147.5 126 57.1
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 1.5e-33 146.7 211 43.6
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 3.4e-33 145.6 98 73.5
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 5.8e-33 144.8 95 73.7
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 3.7e-32 142.1 234 40.6
MELO3C023807.2 Cucumis melo HOM05D006225 ORTHO05D007676 3.7e-32 142.1 101 73.3
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 8.3e-32 141.0 211 42.2
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 1.4e-31 140.2 211 41.7
arahy.Tifrunner.gnm1.ann1.IRK6TR Arachis hypogaea HOM05D006225 ORTHO05D007676 1.9e-31 139.8 223 42.2
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 9.2e-31 137.5 175 49.7
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 6.0e-30 134.8 125 55.2
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.3e-29 133.7 175 48.0
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 1.7e-29 133.3 181 44.8
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 1.9e-28 129.8 98 72.4
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 7.3e-28 127.9 171 48.0
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 8.1e-27 124.4 201 44.3
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 1.1e-26 124.0 131 51.1
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 3.1e-26 122.5 130 52.3
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.5e-25 120.2 99 60.6
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.7e-24 116.7 98 62.2
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 1.2e-22 110.5 90 60.0
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 1.2e-14 84.0 181 36.5
CBR_g8910 Chara braunii HOM05D006555 ORTHO05D008376 1.3e-13 80.5 138 37.0
SMO196G0121 Selaginella moellendorffii HOM05D006225 ORTHO05D007676 3.6e-11 72.4 96 43.8
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 4.7e-11 72.0 99 44.4
Eucgr.H04974 Eucalyptus grandis HOM05D006225 ORTHO05D007676 3.2e-07 59.3 86 45.3


User provided reference genes

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