Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 4.6e-74 281.2 147 100.0
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 3.1e-38 162.2 156 57.7
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 3.8e-36 155.2 157 52.2
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 3.8e-36 155.2 174 53.4
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 5.0e-36 154.8 174 53.4
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 5.0e-36 154.8 174 52.9
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 6.5e-36 154.5 156 55.8
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 1.5e-35 153.3 107 68.2
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 1.9e-35 152.9 153 54.9
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 8.0e-34 147.5 155 55.5
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 4.0e-33 145.2 151 57.6
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 1.2e-32 143.7 165 47.3
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 1.5e-32 143.3 157 54.8
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 9.7e-32 140.6 158 50.0
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 1.7e-31 139.8 143 58.0
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 3.7e-31 138.7 168 50.6
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 3.1e-30 135.6 112 59.8
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 5.3e-30 134.8 153 52.3
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 1.0e-28 130.6 107 57.0
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 2.9e-28 129.0 108 57.4
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 5.0e-28 128.3 142 50.7
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 6.5e-28 127.9 112 55.4
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 1.5e-27 126.7 142 50.0
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 1.5e-27 126.7 105 58.1
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 2.5e-27 125.9 107 56.1
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 3.2e-27 125.6 147 52.4
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 4.2e-27 125.2 151 49.0
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 4.2e-27 125.2 144 47.9
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 4.7e-26 121.7 151 46.4
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 8.0e-26 120.9 146 48.6
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 8.0e-26 120.9 125 49.6
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 8.0e-26 120.9 106 53.8
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 1.4e-25 120.2 139 54.0
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.8e-25 119.8 146 50.0
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 1.8e-25 119.8 141 51.1
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 1.8e-25 119.8 109 56.0
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 1.8e-25 119.8 144 48.6
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 2.3e-25 119.4 142 50.7
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 3.0e-25 119.0 149 47.0
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 5.2e-25 118.2 148 45.3
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 5.2e-25 118.2 100 54.0
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 8.8e-25 117.5 149 47.0
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 8.8e-25 117.5 148 49.3
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 1.5e-24 116.7 145 47.6
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 2.0e-24 116.3 148 49.3
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 2.0e-24 116.3 108 53.7
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 2.6e-24 115.9 158 44.9
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 3.4e-24 115.5 159 43.4
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 4.4e-24 115.2 146 49.3
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 4.4e-24 115.2 99 54.5
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 7.5e-24 114.4 137 42.3
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 1.3e-23 113.6 109 53.2
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 1.7e-23 113.2 142 48.6
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 4.8e-23 111.7 109 52.3
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 6.3e-23 111.3 149 47.0
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 8.3e-23 110.9 154 42.9
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 1.8e-22 109.8 145 44.8
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 5.4e-22 108.2 102 52.9
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 5.4e-22 108.2 106 48.1
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 7.0e-22 107.8 154 42.2
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 7.0e-22 107.8 110 51.8
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 7.0e-22 107.8 161 42.2
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 9.1e-22 107.5 163 40.5
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 9.1e-22 107.5 144 47.9
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 9.1e-22 107.5 157 41.4
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 1.6e-21 106.7 164 40.9
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 2.0e-21 106.3 145 44.1
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 2.0e-21 106.3 151 46.4
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 3.5e-21 105.5 164 43.3
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 5.9e-21 104.8 99 53.5
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 1.0e-20 104.0 100 51.0
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 1.7e-20 103.2 107 53.3
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 6.6e-20 101.3 134 41.0
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 4.2e-19 98.6 152 44.1
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 1.2e-18 97.1 153 43.8
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 4.7e-18 95.1 105 47.6
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 1.8e-17 93.2 103 41.7
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 1.8e-17 93.2 154 43.5
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 1.8e-17 93.2 141 46.1
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 9.8e-16 87.4 145 37.9
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 2.2e-15 86.3 126 38.9
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 9.2e-14 80.9 144 41.0
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.9e-11 73.2 174 32.8
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 2.5e-11 72.8 158 31.0
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 8.0e-10 67.8 113 35.4


User provided reference genes

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