Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008318.1 Olea europaea HOM05D007107 ORTHO05D009198 8.9e-31 136.3 71 100.0
Oeu011135.1 Olea europaea HOM05D007107 ORTHO05D009198 3.2e-12 74.7 71 59.2
Oeu010443.1 Olea europaea HOM05D007107 ORTHO05D009198 1.7e-10 68.9 58 72.4
Oeu009671.1 Olea europaea HOM05D007107 ORTHO05D009198 3.0e-10 68.2 59 69.5
Peaxi162Scf00016g02820 Petunia axillaris HOM05D007107 ORTHO05D009198 9.5e-09 63.2 56 69.6
TAR628G1630 Trochodendron aralioides HOM05D007107 ORTHO05D009198 1.6e-08 62.4 54 70.4
Haze_10225 Corylus avellana HOM05D007107 ORTHO05D009198 2.1e-08 62.0 58 63.8
PGR042G2158 Punica granatum HOM05D007107 ORTHO05D009198 2.8e-08 61.6 59 57.6
Cfa004630 Carpinus fangiana HOM05D007107 ORTHO05D009198 4.7e-08 60.8 54 63.0
CiPaw.05G017500 Carya illinoinensis HOM05D007107 ORTHO05D009198 6.2e-08 60.5 55 63.6
Nitab4.5_0001105g0070 Nicotiana tabacum HOM05D007107 ORTHO05D009198 6.2e-08 60.5 56 66.1
Nitab4.5_0008075g0020 Nicotiana tabacum HOM05D007107 ORTHO05D009198 6.2e-08 60.5 56 66.1
Lsat_1_v5_gn_5_114201 Lactuca sativa HOM05D007107 ORTHO05D009198 8.1e-08 60.1 54 66.7
Solyc01g107100.3 Solanum lycopersicum HOM05D007107 ORTHO05D009198 8.1e-08 60.1 56 64.3
Sopen01g049370 Solanum pennellii HOM05D007107 ORTHO05D009198 8.1e-08 60.1 56 66.1
Eucgr.G01220 Eucalyptus grandis HOM05D007107 ORTHO05D009198 2.4e-07 58.5 60 55.0
Lsat_1_v5_gn_9_111721 Lactuca sativa HOM05D007107 ORTHO05D009198 4.0e-07 57.8 55 60.0
Prupe.8G144000 Prunus persica HOM05D007107 ORTHO05D009198 4.0e-07 57.8 73 52.1
TAR376G0510 Trochodendron aralioides HOM05D007107 ORTHO05D009198 4.0e-07 57.8 55 63.6
Atru.chr5.2359 Acer truncatum HOM05D007107 ORTHO05D009198 5.2e-07 57.4 55 61.8
Potri.001G294800 Populus trichocarpa HOM05D007107 ORTHO05D009198 5.2e-07 57.4 56 60.7
MELO3C018001.2 Cucumis melo HOM05D007107 ORTHO05D009198 6.8e-07 57.0 52 57.7
CsaV3_4G000330 Cucumis sativus L. HOM05D007107 ORTHO05D009198 6.8e-07 57.0 52 57.7
Solyc01g107090.2 Solanum lycopersicum HOM05D007107 ORTHO05D009198 6.8e-07 57.0 56 66.1
Sopen01g049360 Solanum pennellii HOM05D007107 ORTHO05D009198 6.8e-07 57.0 56 66.1
MD10G1105100 Malus domestica HOM05D007107 ORTHO05D009198 8.9e-07 56.6 59 62.7
Thecc.02G116600 Theobroma cacao HOM05D007107 ORTHO05D009198 8.9e-07 56.6 58 56.9
Gohir.A13G046600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.2e-06 56.2 58 56.9
Manes.07G058800 Manihot esculenta HOM05D007107 ORTHO05D009198 1.2e-06 56.2 58 62.1
Rhsim11G0151000 Rhododendron simsii HOM05D007107 ORTHO05D009198 1.2e-06 56.2 61 55.7
Gohir.D12G020100 Gossypium hirsutum HOM05D007107 ORTHO05D009198 1.5e-06 55.8 64 51.6
Gorai.008G020500 Gossypium raimondii HOM05D007107 ORTHO05D009198 1.5e-06 55.8 64 51.6
EL10Ac8g19388 Beta vulgaris HOM05D007107 ORTHO05D009198 2.0e-06 55.5 57 57.9
ECA234G2040 Erigeron canadensis HOM05D007107 ORTHO05D009198 2.0e-06 55.5 58 62.1
Ah.09g231830 Amaranthus hybridus HOM05D007107 ORTHO05D009198 2.6e-06 55.1 55 58.2
ClCG10G010430 Citrullus lanatus HOM05D007107 ORTHO05D009198 2.6e-06 55.1 52 59.6
Migut.B00446 Erythranthe guttata HOM05D007107 ORTHO05D009198 2.6e-06 55.1 66 54.5
RcHm_v2.0_Chr6g0253681 Rosa chinensis HOM05D007107 ORTHO05D009198 2.6e-06 55.1 85 49.4
Ciclev10029615m.g Citrus clementina HOM05D007107 ORTHO05D009198 3.4e-06 54.7 56 58.9
COL.COLO4_32518 Corchorus olitorius HOM05D007107 ORTHO05D009198 3.4e-06 54.7 61 55.7
Gohir.D13G042600 Gossypium hirsutum HOM05D007107 ORTHO05D009198 4.4e-06 54.3 70 50.0
Gorai.013G050500 Gossypium raimondii HOM05D007107 ORTHO05D009198 4.4e-06 54.3 70 50.0
Sc08g0004510 Simmondsia chinensis HOM05D007107 ORTHO05D009198 4.4e-06 54.3 63 54.0
Aqoxy5G00877 Aquilegia oxysepala HOM05D007107 ORTHO05D009198 5.8e-06 53.9 58 60.3
DCAR_001690 Daucus carota HOM05D007107 ORTHO05D009198 5.8e-06 53.9 53 60.4
CSS0046981 Camellia sinensis var. sinensis HOM05D007107 ORTHO05D009198 7.6e-06 53.5 54 57.4
Gohir.A12G019900 Gossypium hirsutum HOM05D007107 ORTHO05D009198 7.6e-06 53.5 64 50.0
SalBow6G0491 Salvia bowleyana HOM05D007107 ORTHO05D009198 7.6e-06 53.5 55 58.2


User provided reference genes

Program Settings