Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 5.6e-95 350.9 174 100.0
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 2.2e-91 339.0 174 97.1
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 6.7e-72 274.2 164 81.1
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.5e-71 272.3 165 80.0
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 3.3e-71 271.9 165 80.0
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 5.7e-71 271.2 164 79.9
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 5.7e-71 271.2 164 79.9
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 7.4e-71 270.8 165 80.0
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 9.7e-71 270.4 168 78.6
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 3.1e-69 265.4 168 78.6
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 6.9e-69 264.2 165 78.2
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 9.0e-69 263.8 168 76.2
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 2.0e-68 262.7 165 77.6
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 4.5e-68 261.5 168 76.2
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 5.9e-68 261.2 168 76.8
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 5.9e-68 261.2 168 76.8
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 5.9e-68 261.2 166 77.7
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 7.6e-68 260.8 168 76.2
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 1.3e-67 260.0 169 76.3
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 1.7e-67 259.6 169 78.7
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 2.2e-67 259.2 170 74.7
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 1.1e-66 256.9 165 75.8
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.4e-66 256.5 168 73.8
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 1.4e-66 256.5 165 75.8
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 3.2e-66 255.4 155 80.0
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.2e-66 255.0 168 73.8
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 5.5e-66 254.6 168 75.6
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 7.2e-66 254.2 174 70.7
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 7.2e-66 254.2 165 74.5
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 9.3e-66 253.8 165 73.3
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 1.2e-65 253.4 168 73.2
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 2.1e-65 252.7 170 73.5
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.7e-65 252.3 169 73.4
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 2.7e-65 252.3 169 74.6
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 2.7e-65 252.3 168 75.0
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 2.7e-65 252.3 167 74.3
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 3.6e-65 251.9 165 74.5
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 4.6e-65 251.5 168 73.2
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 4.6e-65 251.5 168 73.2
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 7.9e-65 250.8 165 74.5
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 7.9e-65 250.8 165 75.8
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 7.9e-65 250.8 165 74.5
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.0e-64 250.4 168 72.6
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 1.3e-64 250.0 155 76.1
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 1.3e-64 250.0 170 71.2
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.8e-64 249.6 168 73.2
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 3.9e-64 248.4 162 75.3
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 1.1e-63 246.9 165 70.9
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 1.1e-63 246.9 169 75.1
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 1.9e-63 246.1 166 73.5
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 2.5e-63 245.7 165 72.1
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 2.5e-63 245.7 165 72.1
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 3.3e-63 245.4 155 76.1
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 5.7e-63 244.6 165 72.1
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 7.4e-63 244.2 170 70.6
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 7.4e-63 244.2 167 71.9
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 9.7e-63 243.8 166 70.5
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 9.7e-63 243.8 169 73.4
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 9.7e-63 243.8 168 70.8
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.7e-62 243.0 165 73.3
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 1.7e-62 243.0 165 72.7
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 2.2e-62 242.7 155 74.8
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 2.8e-62 242.3 165 71.5
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 4.8e-62 241.5 151 78.8
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 6.3e-62 241.1 167 73.1
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 6.3e-62 241.1 165 69.7
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 8.2e-62 240.7 166 71.7
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 8.2e-62 240.7 159 72.3
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 8.2e-62 240.7 169 72.2
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 1.1e-61 240.4 165 70.3
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.1e-61 240.4 163 71.2
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 1.1e-61 240.4 153 76.5
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.4e-61 240.0 165 70.3
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 1.4e-61 240.0 168 72.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.8e-61 239.6 159 72.3
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.8e-61 239.6 169 70.4
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 4.1e-61 238.4 153 77.1
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 4.1e-61 238.4 150 76.7
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 6.9e-61 237.7 165 70.9
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 9.1e-61 237.3 166 71.1
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 1.2e-60 236.9 166 70.5
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 4.5e-60 235.0 168 72.0
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 4.5e-60 235.0 168 72.0
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 7.7e-60 234.2 154 72.1
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 1.0e-59 233.8 167 70.7
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.7e-59 233.0 151 74.8
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 1.7e-59 233.0 165 67.3
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 5.0e-59 231.5 167 70.1
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 8.5e-59 230.7 168 70.8
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 8.5e-59 230.7 168 70.8
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.1e-58 230.3 154 71.4
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.1e-58 230.3 152 76.3
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.4e-58 229.9 152 75.7
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 2.5e-58 229.2 147 74.1
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 5.5e-58 228.0 168 68.5
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 7.2e-58 227.6 152 75.0
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 1.4e-56 223.4 167 68.3
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 3.0e-56 222.2 168 65.5
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 3.9e-56 221.9 168 65.5
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 5.1e-56 221.5 148 73.6
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 2.0e-55 219.5 168 64.9
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 3.3e-55 218.8 168 64.3
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 1.3e-54 216.9 154 68.8
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 4.8e-54 214.9 154 69.5
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 6.3e-54 214.5 163 67.5
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 3.4e-52 208.8 170 65.3
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 2.9e-51 205.7 171 63.7
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 3.8e-51 205.3 166 65.7
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 3.8e-51 205.3 168 61.3
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 5.0e-51 204.9 170 67.1
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 6.5e-51 204.5 137 71.5
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 1.5e-47 193.4 154 61.7
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 4.4e-47 191.8 128 75.0
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 9.7e-47 190.7 133 69.9
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 6.5e-43 177.9 158 57.6
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 1.8e-40 169.9 148 58.8
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.8e-38 162.5 138 62.3
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 1.8e-37 159.8 109 72.5
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 1.8e-37 159.8 124 62.9
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.2e-36 157.1 117 65.0
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 2.0e-36 156.4 152 53.9
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 2.7e-36 156.0 149 54.4
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 7.7e-36 154.5 148 54.1
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 7.2e-34 147.9 150 52.0
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 6.3e-30 134.8 77 84.4
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 2.9e-27 125.9 165 43.6
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 3.8e-27 125.6 167 48.5
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 8.6e-27 124.4 165 43.6
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 5.2e-24 115.2 147 44.9


User provided reference genes

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