Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 3.5e-247 857.8 425 100.0
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 3.2e-184 648.7 426 76.5
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.8e-179 632.9 419 73.3
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 7.6e-178 627.5 419 72.3
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 6.4e-177 624.4 410 72.2
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 5.4e-176 621.3 392 76.3
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 5.4e-176 621.3 419 71.4
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 7.1e-176 620.9 393 75.8
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 7.1e-176 620.9 396 74.5
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 9.3e-176 620.5 423 71.4
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 9.3e-176 620.5 420 71.0
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 5.1e-174 614.8 409 73.3
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.8e-171 606.3 394 75.4
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 6.9e-171 604.4 394 73.9
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 2.6e-170 602.4 391 74.9
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 5.8e-170 601.3 419 70.6
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 7.6e-170 600.9 414 72.2
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.7e-169 599.7 393 73.5
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.2e-169 599.4 398 71.6
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 2.9e-169 599.0 395 71.9
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 2.9e-169 599.0 409 71.4
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 8.4e-169 597.4 394 72.6
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.1e-168 597.0 396 71.7
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 9.3e-168 594.0 416 70.0
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 6.0e-167 591.3 389 71.5
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 7.9e-167 590.9 419 67.8
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 1.8e-166 589.7 392 72.7
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 2.3e-166 589.3 388 74.2
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 3.9e-166 588.6 392 71.7
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 1.1e-165 587.0 410 70.5
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.5e-165 586.6 390 72.3
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 2.5e-165 585.9 390 72.1
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 2.5e-165 585.9 394 71.1
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 3.3e-165 585.5 422 67.3
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 5.6e-165 584.7 422 68.2
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 7.4e-165 584.3 392 71.7
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 7.4e-165 584.3 415 69.4
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 1.6e-164 583.2 393 70.7
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 8.2e-164 580.9 430 66.0
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 1.4e-163 580.1 395 69.6
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 1.4e-163 580.1 418 67.7
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.2e-162 577.0 400 69.0
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 4.5e-162 575.1 391 70.3
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 5.8e-162 574.7 393 70.2
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 1.0e-161 573.9 393 69.5
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 2.9e-161 572.4 398 69.8
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 3.8e-161 572.0 389 70.7
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 4.9e-161 571.6 400 70.5
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 1.9e-160 569.7 444 65.3
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 2.5e-160 569.3 391 69.8
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 3.2e-160 568.9 438 65.8
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 5.5e-160 568.2 401 70.3
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 7.1e-160 567.8 391 70.1
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 2.1e-159 566.2 413 68.5
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 2.7e-159 565.8 392 69.4
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 1.8e-158 563.1 401 67.1
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 3.9e-158 562.0 401 66.8
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 5.1e-158 561.6 403 68.0
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 8.7e-158 560.8 391 67.3
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.9e-157 559.7 401 67.1
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 6.3e-156 554.7 470 61.5
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 8.2e-156 554.3 445 62.9
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 3.1e-155 552.4 397 69.5
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 3.8e-153 545.4 421 64.4
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 2.5e-152 542.7 420 64.5
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 9.4e-152 540.8 390 66.4
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 9.4e-152 540.8 390 67.4
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 2.1e-151 539.7 393 67.2
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 2.1e-151 539.7 396 65.7
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 2.1e-151 539.7 392 66.3
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.7e-151 539.3 394 66.2
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 4.6e-151 538.5 392 66.3
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 6.7e-150 534.6 392 65.3
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 6.7e-150 534.6 420 63.3
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.5e-149 533.5 412 63.6
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 1.9e-149 533.1 393 65.4
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 2.5e-149 532.7 454 59.9
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 2.5e-149 532.7 392 66.6
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 2.5e-149 532.7 392 66.6
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 1.4e-147 526.9 376 67.8
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 3.1e-147 525.8 392 64.5
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 4.2e-144 515.4 330 73.6
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 2.0e-141 506.5 328 72.3
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 7.0e-139 498.0 410 62.7
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 7.0e-139 498.0 359 68.2
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 1.7e-137 493.4 393 61.8
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 4.2e-136 488.8 462 54.5
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.8e-131 473.4 393 61.3
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 7.0e-131 471.5 359 65.5
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 4.2e-128 462.2 350 65.7
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.2e-125 454.1 330 64.2
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 4.4e-125 452.2 329 68.4
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 2.8e-124 449.5 392 54.3
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 1.4e-123 447.2 309 70.2
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 2.9e-121 439.5 307 68.7
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 3.4e-117 426.0 280 70.7
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.7e-116 423.7 394 53.3
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 9.8e-109 397.9 286 63.6
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 4.1e-107 392.5 361 54.0
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 2.0e-106 390.2 307 62.5
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 4.5e-106 389.0 409 49.9
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 4.7e-103 379.0 320 59.4
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 1.9e-99 367.1 287 62.4
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 3.2e-99 366.3 280 63.6
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 5.2e-94 349.0 240 69.6
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 7.5e-93 345.1 405 47.4
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 1.0e-89 334.7 213 71.8
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.2e-85 321.2 446 42.4
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.7e-84 317.4 237 64.1
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 7.1e-83 312.0 233 63.9
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.0e-81 308.1 348 48.0
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 1.1e-72 278.1 183 70.5
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 4.4e-69 266.2 186 72.0
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.0e-57 228.4 408 38.0
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 7.4e-56 222.2 149 72.5
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 3.4e-53 213.4 145 67.6
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 5.8e-53 212.6 248 45.6
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 7.6e-53 212.2 157 66.9
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 2.3e-49 200.7 188 59.0
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 9.6e-48 195.3 173 57.8
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 1.0e-41 175.3 422 32.0
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 8.7e-41 172.2 420 31.4
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 2.5e-40 170.6 120 70.8
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 3.1e-38 163.7 422 30.8
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 1.5e-37 161.4 432 29.6
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 4.2e-35 153.3 420 31.0
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 9.1e-30 135.6 88 69.3
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.2e-29 135.2 235 37.9
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 8.5e-28 129.0 113 52.2
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.7e-26 124.0 85 65.9
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 6.7e-25 119.4 79 69.6
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 6.7e-25 119.4 308 31.5
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 2.2e-20 104.4 66 75.8
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.2e-19 100.1 67 79.1
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 1.8e-17 94.7 87 62.1
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 1.1e-14 85.5 53 69.8
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 3.5e-13 80.5 133 38.3
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 4.4e-08 63.5 37 83.8


User provided reference genes

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