Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008128.1 Olea europaea HOM05D000336 ORTHO05D000593 3.2e-81 305.1 156 100.0
Oeu041904.1 Olea europaea HOM05D000336 ORTHO05D000593 3.9e-71 271.6 148 93.9
Oeu036092.1 Olea europaea HOM05D000336 ORTHO05D000593 1.6e-53 213.0 155 74.8
MSTRG.6800 Avicennia marina HOM05D000336 ORTHO05D000593 5.5e-33 144.8 163 56.4
Hma1.2p1_0002F.1_g002640 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 4.7e-24 115.2 170 47.1
Hma1.2p1_0178F.1_g079043 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 4.7e-24 115.2 170 47.1
Dinv15466 Davidia involucrata HOM05D000336 ORTHO05D000593 3.7e-21 105.5 168 45.8
Rhsim04G0073400 Rhododendron simsii HOM05D000336 ORTHO05D000593 1.5e-19 100.1 157 44.6
CAN.G782.9 Capsicum annuum HOM05D000336 ORTHO05D000593 4.5e-19 98.6 143 46.9
Peaxi162Scf00384g00517 Petunia axillaris HOM05D000336 ORTHO05D000593 1.7e-18 96.7 132 48.5
CSS0023151 Camellia sinensis var. sinensis HOM05D000336 ORTHO05D000593 2.9e-18 95.9 176 44.9
SGA_v2.0_scaffold9G04803 Striga asiatica HOM05D000336 ORTHO05D000593 6.5e-18 94.7 145 42.8
Dinv03921 Davidia involucrata HOM05D000336 ORTHO05D000593 8.5e-18 94.4 140 47.1
Nitab4.5_0007774g0080 Nicotiana tabacum HOM05D000336 ORTHO05D000593 8.5e-18 94.4 143 45.5
Nitab4.5_0003291g0020 Nicotiana tabacum HOM05D000336 ORTHO05D000593 2.1e-16 89.7 143 44.1
vmacro09231 Vaccinium macrocarpon HOM05D000336 ORTHO05D000593 3.6e-16 89.0 173 38.7
Migut.M00249 Erythranthe guttata HOM05D000336 ORTHO05D000593 8.8e-15 84.3 128 46.9
Hma1.2p1_0002F.1_g002650 Hydrangea macrophylla HOM05D000336 ORTHO05D000593 5.7e-14 81.6 153 41.2
PGSC0003DMG400010560 Solanum tuberosum HOM05D000336 ORTHO05D000593 5.7e-14 81.6 142 40.8
TAR627G0342 Trochodendron aralioides HOM05D000336 ORTHO05D000593 6.3e-13 78.2 139 41.7
Actinidia30445 Actinidia chinensis HOM05D000336 ORTHO05D000593 8.2e-13 77.8 132 40.9
Manes.13G138700 Manihot esculenta HOM05D000336 ORTHO05D000593 2.4e-12 76.3 222 32.9
Cc05_g08080 Coffea canephora HOM05D000336 ORTHO05D000593 7.0e-12 74.7 167 36.5
Haze_13341 Corylus avellana HOM05D000336 ORTHO05D000593 1.2e-11 73.9 204 33.8
TAR629G0035 Trochodendron aralioides HOM05D000336 ORTHO05D000593 2.6e-11 72.8 145 40.0
Cfa014711 Carpinus fangiana HOM05D000336 ORTHO05D000593 3.5e-11 72.4 203 33.5
Manes.12G091200 Manihot esculenta HOM05D000336 ORTHO05D000593 3.5e-11 72.4 217 32.7
Actinidia11130 Actinidia chinensis HOM05D000336 ORTHO05D000593 1.7e-10 70.1 157 37.6
GSVIVG01020670001 Vitis vinifera HOM05D000336 ORTHO05D000593 1.7e-10 70.1 166 39.2
Cpa.g.sc209.24 Carica papaya HOM05D000336 ORTHO05D000593 5.0e-10 68.6 188 33.0
Actinidia10979 Actinidia chinensis HOM05D000336 ORTHO05D000593 6.5e-10 68.2 147 37.4
EL10Ac9g20871 Beta vulgaris HOM05D000336 ORTHO05D000593 1.5e-09 67.0 155 38.1
CiPaw.03G185600 Carya illinoinensis HOM05D000336 ORTHO05D000593 1.5e-09 67.0 204 32.4
Solyc10g008070.4 Solanum lycopersicum HOM05D000336 ORTHO05D000593 4.2e-09 65.5 140 35.7
Sopen10g003940 Solanum pennellii HOM05D000336 ORTHO05D000593 4.2e-09 65.5 140 35.7
Glyma.12G209100 Glycine max HOM05D000336 ORTHO05D000593 5.5e-09 65.1 203 30.0
QL08p041317 Quercus lobata HOM05D000336 ORTHO05D000593 1.2e-08 63.9 112 39.3
CiPaw.04G131400 Carya illinoinensis HOM05D000336 ORTHO05D000593 2.1e-08 63.2 190 31.6
TWI59G0223 Tripterygium wilfordii HOM05D000336 ORTHO05D000593 2.7e-08 62.8 190 31.1
Aqoxy1G02188 Aquilegia oxysepala HOM05D000336 ORTHO05D000593 3.6e-08 62.4 145 37.2
ATR0602G184 Amborella trichopoda HOM05D000336 ORTHO05D000593 1.4e-07 60.5 151 35.1
Glyma.13G292200 Glycine max HOM05D000336 ORTHO05D000593 1.4e-07 60.5 199 29.6
Lj3g0006084 Lotus japonicus HOM05D000336 ORTHO05D000593 4.0e-07 58.9 203 30.5
MBI07_g17045_MAGBIO Magnolia biondii HOM05D000336 ORTHO05D000593 6.7e-07 58.2 146 31.5
Thecc.01G243400 Theobroma cacao HOM05D000336 ORTHO05D000593 6.7e-07 58.2 70 47.1
CANSAT64G0120 Cannabis sativa HOM05D000336 ORTHO05D000593 1.2e-06 57.4 107 39.3
Gohir.A05G373600 Gossypium hirsutum HOM05D000336 ORTHO05D000593 1.2e-06 57.4 92 46.7
Hund00980 Selenicereus undatus HOM05D000336 ORTHO05D000593 1.2e-06 57.4 127 33.9
Gorai.012G047300 Gossypium raimondii HOM05D000336 ORTHO05D000593 1.5e-06 57.0 92 46.7
Gohir.D04G041800 Gossypium hirsutum HOM05D000336 ORTHO05D000593 2.6e-06 56.2 194 31.4
Gorai.012G047100 Gossypium raimondii HOM05D000336 ORTHO05D000593 2.6e-06 56.2 193 31.6
Lsat_1_v5_gn_4_27481 Lactuca sativa HOM05D000336 ORTHO05D000593 3.3e-06 55.8 106 36.8
Sc12g0003430 Simmondsia chinensis HOM05D000336 ORTHO05D000593 4.4e-06 55.5 52 57.7
AUR62042314 Chenopodium quinoa HOM05D000336 ORTHO05D000593 5.7e-06 55.1 68 45.6
FAN09G2782 Fragaria x ananassa HOM05D000336 ORTHO05D000593 5.7e-06 55.1 234 28.2
Gohir.A05G373800 Gossypium hirsutum HOM05D000336 ORTHO05D000593 5.7e-06 55.1 199 30.2
RcHm_v2.0_Chr2g0129031 Rosa chinensis HOM05D000336 ORTHO05D000593 5.7e-06 55.1 225 28.0
Gohir.D04G041900 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.7e-06 54.3 69 52.2
Gohir.D04G042000 Gossypium hirsutum HOM05D000336 ORTHO05D000593 9.7e-06 54.3 212 29.7
Gorai.012G047200 Gossypium raimondii HOM05D000336 ORTHO05D000593 9.7e-06 54.3 69 52.2
Potri.019G090700 Populus trichocarpa HOM05D000336 ORTHO05D000593 9.7e-06 54.3 80 42.5


User provided reference genes

Program Settings