Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008103.1 Olea europaea HOM05D007683 ORTHO05D009703 4.7e-73 277.7 136 100.0
Peaxi162Scf00073g10232 Petunia axillaris HOM05D007683 ORTHO05D009703 1.2e-23 113.6 141 48.9
Hma1.2p1_0264F.1_g105970 Hydrangea macrophylla HOM05D007683 ORTHO05D009703 1.5e-23 113.2 141 46.1
MSTRG.8877 Avicennia marina HOM05D007683 ORTHO05D009703 7.2e-21 104.4 92 59.8
Potri.013G090200 Populus trichocarpa HOM05D007683 ORTHO05D009703 1.2e-20 103.6 149 46.3
PGSC0003DMG400020609 Solanum tuberosum HOM05D007683 ORTHO05D009703 2.7e-20 102.4 140 45.7
Cc02_g05230 Coffea canephora HOM05D007683 ORTHO05D009703 1.8e-19 99.8 150 41.3
Medtr5g067740 Medicago truncatula HOM05D007683 ORTHO05D009703 5.1e-19 98.2 129 47.3
Glyma.06G141600 Glycine max HOM05D007683 ORTHO05D009703 1.1e-18 97.1 83 62.7
Thecc.10G184800 Theobroma cacao HOM05D007683 ORTHO05D009703 2.5e-18 95.9 75 69.3
Cfa001197 Carpinus fangiana HOM05D007683 ORTHO05D009703 3.3e-18 95.5 130 44.6
Dinv21856 Davidia involucrata HOM05D004933 ORTHO05D005465 4.3e-18 95.1 84 58.3
Manes.10G003157 Manihot esculenta HOM05D007683 ORTHO05D009703 4.3e-18 95.1 102 51.0
COL.COLO4_19470 Corchorus olitorius HOM05D007683 ORTHO05D009703 5.7e-18 94.7 81 64.2
FAN03G1207 Fragaria x ananassa HOM05D007683 ORTHO05D009703 5.7e-18 94.7 84 61.9
Ah.11g042460 Amaranthus hybridus HOM05D007683 ORTHO05D009703 7.4e-18 94.4 132 42.4
Gohir.D10G184400 Gossypium hirsutum HOM05D007683 ORTHO05D009703 7.4e-18 94.4 75 61.3
Gohir.A10G177800 Gossypium hirsutum HOM05D007683 ORTHO05D009703 9.7e-18 94.0 75 61.3
Gorai.011G206600 Gossypium raimondii HOM05D007683 ORTHO05D009703 9.7e-18 94.0 75 61.3
FAN01G0748 Fragaria x ananassa HOM05D007683 ORTHO05D009703 1.3e-17 93.6 85 61.2
FvH4_7g26070 Fragaria vesca HOM05D007683 ORTHO05D009703 2.2e-17 92.8 85 60.0
Nitab4.5_0006356g0030 Nicotiana tabacum HOM05D007683 ORTHO05D009703 2.2e-17 92.8 64 67.2
SGA_v2.0_scaffold60G20879 Striga asiatica HOM05D007683 ORTHO05D009703 2.2e-17 92.8 126 48.4
VMungo1309G1531 Vigna mungo HOM05D007683 ORTHO05D009703 2.8e-17 92.4 72 58.3
PGR044G1007 Punica granatum HOM05D007683 ORTHO05D009703 3.7e-17 92.0 82 59.8
Nitab4.5_0000171g0240 Nicotiana tabacum HOM05D007683 ORTHO05D009703 6.3e-17 91.3 57 75.4
Psat2g062760 Pisum sativum HOM05D007683 ORTHO05D009703 6.3e-17 91.3 132 46.2
Glyma.14G186400 Glycine max HOM05D007683 ORTHO05D009703 1.1e-16 90.5 93 52.7
Ciclev10033031m.g Citrus clementina HOM05D007683 ORTHO05D009703 1.4e-16 90.1 83 61.4
CsaV3_5G011110 Cucumis sativus L. HOM05D007683 ORTHO05D009703 1.4e-16 90.1 129 41.1
MD01G1169200 Malus domestica HOM05D007683 ORTHO05D009703 1.4e-16 90.1 143 45.5
LjContig00408g0002016 Lotus japonicus HOM05D007683 ORTHO05D009703 1.8e-16 89.7 82 58.5
RcHm_v2.0_Chr1g0372481 Rosa chinensis HOM05D007683 ORTHO05D009703 1.8e-16 89.7 92 56.5
Haze_17368 Corylus avellana HOM05D007683 ORTHO05D009703 2.4e-16 89.4 132 43.2
TAR633G1265 Trochodendron aralioides HOM05D007683 ORTHO05D009703 2.4e-16 89.4 76 61.8
Lalb_Chr11g0067711 Lupinus albus HOM05D007683 ORTHO05D009703 3.1e-16 89.0 81 58.0
Rhsim03G0153400 Rhododendron simsii HOM05D007683 ORTHO05D009703 3.1e-16 89.0 92 52.2
Phvul.008G186200 Phaseolus vulgaris HOM05D007683 ORTHO05D009703 4.1e-16 88.6 89 53.9
TPR.G7683 Trifolium pratense HOM05D007683 ORTHO05D009703 5.3e-16 88.2 130 43.1
Duzib106G0215 Durio zibethinus HOM05D007683 ORTHO05D009703 6.9e-16 87.8 71 60.6
Phvul.009G042800 Phaseolus vulgaris HOM05D007683 ORTHO05D009703 6.9e-16 87.8 85 54.1
Cpa.g.sc19.42 Carica papaya HOM05D007683 ORTHO05D009703 9.1e-16 87.4 129 45.0
MELO3C020169.2 Cucumis melo HOM05D007683 ORTHO05D009703 9.1e-16 87.4 120 45.0
Gorai.010G219400 Gossypium raimondii HOM05D007683 ORTHO05D009703 9.1e-16 87.4 132 43.2
Migut.F00568 Erythranthe guttata HOM05D007683 ORTHO05D009703 1.2e-15 87.0 127 45.7
Prupe.2G265400 Prunus persica HOM05D007683 ORTHO05D009703 1.2e-15 87.0 146 41.1
Lj1g0018746 Lotus japonicus HOM05D007683 ORTHO05D009703 1.5e-15 86.7 87 56.3
Lj6g0012778 Lotus japonicus HOM05D007683 ORTHO05D009703 1.5e-15 86.7 80 57.5
MD07G1235100 Malus domestica HOM05D007683 ORTHO05D009703 2.0e-15 86.3 60 71.7
Solyc03g095700.1 Solanum lycopersicum HOM05D007683 ORTHO05D009703 2.0e-15 86.3 82 56.1
Gohir.D06G187100 Gossypium hirsutum HOM05D007683 ORTHO05D009703 2.6e-15 85.9 133 39.8
Sopen03g025620 Solanum pennellii HOM05D007683 ORTHO05D009703 2.6e-15 85.9 91 52.7
DCAR_014661 Daucus carota HOM05D007683 ORTHO05D009703 3.4e-15 85.5 148 39.2
Ah.12g064430 Amaranthus hybridus HOM05D007683 ORTHO05D009703 4.5e-15 85.1 130 42.3
Glyma.02G219100 Glycine max HOM05D007683 ORTHO05D009703 5.9e-15 84.7 81 55.6
QL08p065063 Quercus lobata HOM05D007683 ORTHO05D009703 5.9e-15 84.7 80 58.8
TWI73G0272 Tripterygium wilfordii HOM05D007683 ORTHO05D009703 2.2e-14 82.8 82 54.9
CANSAT56G2075 Cannabis sativa HOM05D007683 ORTHO05D009703 2.9e-14 82.4 72 61.1
ClCG07G005260 Citrullus lanatus HOM05D007683 ORTHO05D009703 2.9e-14 82.4 79 55.7
Eucgr.J00104 Eucalyptus grandis HOM05D007683 ORTHO05D009703 2.9e-14 82.4 54 74.1
Hma1.2p1_1805F.1_g303190 Hydrangea macrophylla HOM05D007683 ORTHO05D009703 3.8e-14 82.0 52 71.2
Sabra13G0070100 Salix brachista HOM05D007683 ORTHO05D009703 1.4e-13 80.1 87 54.0
Atru.chr12.196 Acer truncatum HOM05D007683 ORTHO05D009703 3.2e-13 79.0 58 65.5
Sed0015955 Sechium edule HOM05D007683 ORTHO05D009703 3.2e-13 79.0 80 60.0
TWI09G1439 Tripterygium wilfordii HOM05D007683 ORTHO05D009703 3.2e-13 79.0 80 56.2
Aa31LG11G6070 Aethionema arabicum HOM05D007683 ORTHO05D009703 5.5e-13 78.2 120 40.0
Nn2g10270 Nelumbo nucifera HOM05D007683 ORTHO05D009703 7.2e-13 77.8 57 63.2
Sed0023040 Sechium edule HOM05D007683 ORTHO05D009703 9.4e-13 77.4 87 51.7
THA.LOC104823170 Tarenaya hassleriana HOM05D007683 ORTHO05D009703 3.6e-12 75.5 60 61.7
Gohir.A06G180150 Gossypium hirsutum HOM05D007683 ORTHO05D009703 6.1e-12 74.7 129 38.8
Carub.0006s0415 Capsella rubella HOM05D007683 ORTHO05D009703 1.4e-11 73.6 63 60.3
Thhalv10014989m.g Eutrema salsugineum HOM05D007683 ORTHO05D009703 2.3e-11 72.8 71 56.3
AL6G15060 Arabidopsis lyrata HOM05D007683 ORTHO05D009703 3.0e-11 72.4 63 58.7
C09p71480 Brassica napus HOM05D007683 ORTHO05D009703 3.0e-11 72.4 63 57.1
BolC9t59911H Brassica oleracea HOM05D007683 ORTHO05D009703 3.0e-11 72.4 63 57.1
CARHR208020 Cardamine hirsuta HOM05D007683 ORTHO05D009703 3.0e-11 72.4 63 58.7
Sp6g37610 Schrenkiella parvula HOM05D007683 ORTHO05D009703 6.7e-11 71.2 66 54.5
BcaB05g21726 Brassica carinata HOM05D007683 ORTHO05D009703 8.8e-11 70.9 45 71.1
BcaC06g32231 Brassica carinata HOM05D007683 ORTHO05D009703 8.8e-11 70.9 45 68.9
VMungo0647G1507 Vigna mungo HOM05D007683 ORTHO05D009703 8.8e-11 70.9 48 66.7
AT5G05220 Arabidopsis thaliana HOM05D007683 ORTHO05D009703 1.5e-10 70.1 45 71.1
A10p30970 Brassica napus HOM05D007683 ORTHO05D009703 2.0e-10 69.7 63 55.6
BraA10t45142Z Brassica rapa HOM05D007683 ORTHO05D009703 2.0e-10 69.7 63 55.6
ATR1127G105 Amborella trichopoda HOM05D007683 ORTHO05D009703 2.8e-09 65.9 71 50.7
MBI15_g36064_MAGBIO Magnolia biondii HOM05D007683 ORTHO05D009703 4.1e-08 62.0 45 66.7
Zm00001eb015980 Zea mays HOM05D007683 ORTHO05D009703 2.0e-07 59.7 52 55.8
Aqoxy4G03276 Aquilegia oxysepala HOM05D007683 ORTHO05D009703 1.3e-06 57.0 41 63.4
CDE07G1521 Ceratophyllum demersum HOM05D006969 ORTHO05D008826 1.7e-06 56.6 48 58.3
Lsat_1_v5_gn_2_126821 Lactuca sativa HOM05D007683 ORTHO05D009703 1.7e-06 56.6 64 48.4


User provided reference genes

Program Settings