Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 1.7e-119 432.6 205 100.0
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 6.2e-93 344.4 205 76.6
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 1.1e-92 343.6 204 77.0
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 3.1e-92 342.0 205 75.6
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 2.0e-91 339.3 203 75.9
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 3.4e-91 338.6 203 75.9
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 9.9e-91 337.0 205 74.1
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 1.1e-89 333.6 203 72.9
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 1.9e-89 332.8 204 74.0
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 7.1e-89 330.9 204 72.5
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 2.7e-88 328.9 205 75.1
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 1.0e-87 327.0 201 73.6
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 3.9e-87 325.1 204 70.1
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 5.1e-87 324.7 205 72.7
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 8.7e-87 323.9 203 72.9
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 8.7e-87 323.9 204 70.1
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 1.1e-86 323.6 204 71.6
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 1.5e-86 323.2 204 70.1
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 2.5e-86 322.4 204 69.6
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 3.3e-86 322.0 205 73.7
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 3.3e-86 322.0 205 73.7
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 5.6e-86 321.2 204 71.6
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 7.3e-86 320.9 205 71.7
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 9.6e-86 320.5 204 69.1
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 9.6e-86 320.5 204 69.1
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 1.3e-85 320.1 204 70.1
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 1.6e-85 319.7 204 69.1
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 1.4e-84 316.6 204 69.6
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 1.4e-84 316.6 204 68.6
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 1.8e-84 316.2 204 70.1
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 4.0e-84 315.1 204 71.1
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 5.3e-84 314.7 204 68.1
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 6.9e-84 314.3 204 69.1
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 6.9e-84 314.3 204 69.1
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 1.5e-83 313.2 204 68.6
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 1.5e-83 313.2 204 67.2
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 3.4e-83 312.0 204 68.6
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 3.4e-83 312.0 204 68.1
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 4.5e-83 311.6 204 67.2
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 7.6e-83 310.8 204 68.1
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 2.2e-82 309.3 204 65.2
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 2.9e-82 308.9 204 67.2
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 2.9e-82 308.9 204 65.2
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 4.9e-82 308.1 203 65.0
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 8.4e-82 307.4 204 66.7
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 8.4e-82 307.4 205 66.3
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 1.1e-81 307.0 203 70.4
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 1.4e-81 306.6 204 66.7
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 5.4e-81 304.7 198 68.2
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 1.6e-80 303.1 204 64.2
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 1.6e-80 303.1 201 68.2
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 3.5e-80 302.0 204 67.2
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 4.6e-80 301.6 204 65.7
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 3.0e-79 298.9 204 66.2
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 6.7e-79 297.7 208 66.8
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 8.7e-79 297.4 204 64.7
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 1.5e-78 296.6 204 65.2
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 3.3e-78 295.4 184 73.4
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 7.4e-78 294.3 204 64.2
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 9.6e-78 293.9 205 65.4
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 1.3e-77 293.5 203 64.5
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 2.8e-77 292.4 203 64.5
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 2.8e-77 292.4 205 67.3
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 4.8e-77 291.6 204 64.2
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 4.8e-77 291.6 204 64.2
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 8.1e-77 290.8 204 63.2
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.4e-76 290.0 204 63.7
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 2.4e-76 289.3 204 62.7
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 2.4e-76 289.3 204 63.2
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 3.1e-76 288.9 205 65.4
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 3.1e-76 288.9 205 65.4
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 1.5e-75 286.6 175 76.0
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 8.4e-74 280.8 178 68.0
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.4e-73 280.0 202 62.9
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 1.9e-73 279.6 206 62.1
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 4.2e-73 278.5 184 70.1
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 1.6e-72 276.6 164 74.4
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 4.6e-72 275.0 206 63.6
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 1.0e-71 273.9 206 63.6
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 2.3e-71 272.7 203 63.5
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 4.8e-69 265.0 211 60.2
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 1.1e-68 263.8 183 64.5
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 1.5e-67 260.0 161 73.3
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 3.4e-67 258.8 165 69.1
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 1.0e-66 257.3 161 72.0
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 4.9e-66 255.0 145 78.6
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 1.1e-65 253.8 182 63.7
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 3.3e-62 242.3 201 56.2
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 2.8e-61 239.2 163 66.9
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 1.0e-58 230.7 214 50.0
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 1.0e-58 230.7 214 50.0
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 5.0e-58 228.4 146 70.5
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 1.9e-57 226.5 149 66.4
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 5.5e-57 224.9 216 49.1
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 1.0e-55 220.7 190 55.8
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 6.7e-55 218.0 212 50.9
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 1.4e-52 210.3 148 64.2
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 2.6e-51 206.1 168 57.1
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 2.9e-50 202.6 148 58.8
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 5.7e-46 188.3 122 70.5
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 1.3e-45 187.2 123 67.5
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 2.2e-45 186.4 215 45.1
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 3.6e-40 169.1 106 66.0
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 4.7e-40 168.7 106 66.0
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 1.1e-36 157.5 162 49.4
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 8.5e-34 147.9 145 51.7
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 1.6e-32 143.7 156 44.2
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 6.7e-31 138.3 168 41.1
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 1.1e-28 131.0 207 36.2
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 2.2e-26 123.2 174 37.9
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 8.0e-24 114.8 105 52.4
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 2.3e-23 113.2 276 26.8
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 7.5e-22 108.2 167 33.5
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 9.5e-17 91.3 62 67.7
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 2.8e-16 89.7 59 69.5
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 1.1e-12 77.8 53 58.5


User provided reference genes

Program Settings