Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu008094.1 Olea europaea HOM05D006803 ORTHO05D008552 1.4e-60 236.1 119 100.0
Oeu059693.1 Olea europaea HOM05D006803 ORTHO05D008552 7.8e-56 220.3 119 94.1
Oeu044167.1 Olea europaea HOM05D006803 ORTHO05D008552 1.0e-39 166.8 118 73.7
SalBow4G1856 Salvia bowleyana HOM05D006803 ORTHO05D008552 5.7e-30 134.4 120 60.8
SalBow4G1881 Salvia bowleyana HOM05D006803 ORTHO05D008552 5.7e-30 134.4 120 60.8
Migut.F00254 Erythranthe guttata HOM05D006803 ORTHO05D008552 3.1e-28 128.6 120 58.3
Oeu059677.1 Olea europaea HOM05D006803 ORTHO05D008552 1.3e-26 123.2 66 86.4
Hma1.2p1_0327F.1_g126650 Hydrangea macrophylla HOM05D006803 ORTHO05D008552 2.2e-26 122.5 107 58.9
Actinidia34181 Actinidia chinensis HOM05D006803 ORTHO05D008552 1.9e-25 119.4 125 52.8
SGA_v2.0_scaffold44G16771 Striga asiatica HOM05D006803 ORTHO05D008552 4.2e-25 118.2 119 56.3
Peaxi162Scf00904g00457 Petunia axillaris HOM05D006803 ORTHO05D008552 9.3e-25 117.1 91 64.8
PGSC0003DMG400009065 Solanum tuberosum HOM05D006803 ORTHO05D008552 2.7e-24 115.5 110 55.5
Actinidia08612 Actinidia chinensis HOM05D006803 ORTHO05D008552 3.5e-24 115.2 125 53.6
Dinv28351 Davidia involucrata HOM05D006803 ORTHO05D008552 3.5e-24 115.2 116 51.7
BcaB08g35659 Brassica carinata HOM05D006803 ORTHO05D008552 1.0e-23 113.6 121 52.1
Solyc03g007540.3 Solanum lycopersicum HOM05D006803 ORTHO05D008552 1.3e-23 113.2 107 56.1
Sopen03g003500 Solanum pennellii HOM05D006803 ORTHO05D008552 1.8e-23 112.8 110 54.5
Carub.0008s1314 Capsella rubella HOM05D006803 ORTHO05D008552 5.1e-23 111.3 132 49.2
A10p10450 Brassica napus HOM05D006803 ORTHO05D008552 1.1e-22 110.2 124 50.0
BraA10t43128Z Brassica rapa HOM05D006803 ORTHO05D008552 1.5e-22 109.8 125 49.6
AL8G27460 Arabidopsis lyrata HOM05D006803 ORTHO05D008552 1.9e-22 109.4 131 48.1
Sp6g15120 Schrenkiella parvula HOM05D006803 ORTHO05D008552 1.9e-22 109.4 126 50.0
THA.LOC104825126 Tarenaya hassleriana HOM05D006803 ORTHO05D008552 1.9e-22 109.4 128 53.1
CARHR265930 Cardamine hirsuta HOM05D006803 ORTHO05D008552 4.3e-22 108.2 126 49.2
QL09p011586 Quercus lobata HOM05D006803 ORTHO05D008552 4.3e-22 108.2 76 73.7
Gohir.D08G108400 Gossypium hirsutum HOM05D006803 ORTHO05D008552 5.7e-22 107.8 91 58.2
Gorai.004G116000 Gossypium raimondii HOM05D006803 ORTHO05D008552 5.7e-22 107.8 91 58.2
Duzib084G0216 Durio zibethinus HOM05D006803 ORTHO05D008552 7.4e-22 107.5 106 54.7
vmacro06587 Vaccinium macrocarpon HOM05D006803 ORTHO05D008552 7.4e-22 107.5 131 48.1
C09p42680 Brassica napus HOM05D006803 ORTHO05D008552 9.7e-22 107.1 81 63.0
BolC9t57144H Brassica oleracea HOM05D006803 ORTHO05D008552 9.7e-22 107.1 81 63.0
Nitab4.5_0000472g0050 Nicotiana tabacum HOM05D006803 ORTHO05D008552 1.3e-21 106.7 101 54.5
Potri.012G033700 Populus trichocarpa HOM05D006803 ORTHO05D008552 1.6e-21 106.3 95 54.7
Sabra12G0022800 Salix brachista HOM05D006803 ORTHO05D008552 2.2e-21 105.9 64 70.3
unitig_37.g11977 Utricularia gibba HOM05D000211 ORTHO05D002285 2.2e-21 105.9 81 60.5
Thhalv10014833m.g Eutrema salsugineum HOM05D006803 ORTHO05D008552 2.8e-21 105.5 128 50.8
CAN.G108.11 Capsicum annuum HOM05D006803 ORTHO05D008552 3.7e-21 105.1 123 49.6
MD01G1213500 Malus domestica HOM05D006803 ORTHO05D008552 4.8e-21 104.8 120 48.3
Haze_00093 Corylus avellana HOM05D006803 ORTHO05D008552 6.3e-21 104.4 119 49.6
TAR333G0006 Trochodendron aralioides HOM05D006803 ORTHO05D008552 6.3e-21 104.4 115 50.4
GSVIVG01028745001 Vitis vinifera HOM05D006803 ORTHO05D008552 6.3e-21 104.4 119 50.4
Cpa.g.sc3.33 Carica papaya HOM05D006803 ORTHO05D008552 8.2e-21 104.0 66 66.7
Nn1g01776 Nelumbo nucifera HOM05D006803 ORTHO05D008552 8.2e-21 104.0 122 50.8
Sabra15G0018100 Salix brachista HOM05D006803 ORTHO05D008552 8.2e-21 104.0 64 71.9
Sabra15G0020600 Salix brachista HOM05D006803 ORTHO05D008552 8.2e-21 104.0 64 71.9
COL.COLO4_07418 Corchorus olitorius HOM05D006803 ORTHO05D008552 1.1e-20 103.6 126 50.8
MBI06_g04289_MAGBIO Magnolia biondii HOM05D006803 ORTHO05D008552 1.1e-20 103.6 123 52.8
AT5G52960 Arabidopsis thaliana HOM05D006803 ORTHO05D008552 1.4e-20 103.2 134 47.0
Gohir.A08G097600 Gossypium hirsutum HOM05D006803 ORTHO05D008552 1.8e-20 102.8 91 57.1
Ciclev10006070m.g Citrus clementina HOM05D006803 ORTHO05D008552 2.4e-20 102.4 126 49.2
MELO3C006968.2 Cucumis melo HOM05D006803 ORTHO05D008552 2.4e-20 102.4 110 52.7
Manes.14G019756 Manihot esculenta HOM05D006803 ORTHO05D008552 3.1e-20 102.1 103 50.5
Nitab4.5_0001331g0090 Nicotiana tabacum HOM05D006803 ORTHO05D008552 3.1e-20 102.1 102 52.0
Thecc.03G190700 Theobroma cacao HOM05D006803 ORTHO05D008552 3.1e-20 102.1 97 55.7
FAN01G0710 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.1e-20 101.7 66 69.7
FAN03G2299 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.1e-20 101.7 66 69.7
FAN06G1048 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.1e-20 101.7 66 69.7
FAN06G4527 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.1e-20 101.7 66 69.7
FAN10G2870 Fragaria x ananassa HOM05D006803 ORTHO05D008552 4.1e-20 101.7 66 69.7
Lj3C914T13 Lonicera japonica HOM05D006803 ORTHO05D008552 4.1e-20 101.7 106 51.9
Prupe.2G305500 Prunus persica HOM05D006803 ORTHO05D008552 4.1e-20 101.7 118 46.6
RcHm_v2.0_Chr1g0379821 Rosa chinensis HOM05D006803 ORTHO05D008552 4.1e-20 101.7 66 69.7
Aa31LG3G9190 Aethionema arabicum HOM05D006803 ORTHO05D008552 6.9e-20 100.9 126 46.8
FvH4_7g30800 Fragaria vesca HOM05D006803 ORTHO05D008552 9.0e-20 100.5 66 68.2
ClCG05G008590 Citrullus lanatus HOM05D006803 ORTHO05D008552 1.2e-19 100.1 110 51.8
HanXRQChr09g0253111 Helianthus annuus HOM05D006803 ORTHO05D008552 1.2e-19 100.1 82 54.9
PSO135G0887 Papaver somniferum HOM05D006803 ORTHO05D008552 1.5e-19 99.8 96 53.1
Sed0009140 Sechium edule HOM05D006803 ORTHO05D008552 1.5e-19 99.8 111 52.3
Potri.016G123100 Populus trichocarpa HOM05D006803 ORTHO05D008552 2.0e-19 99.4 104 51.0
PSO384G2893 Papaver somniferum HOM05D006803 ORTHO05D008552 2.6e-19 99.0 92 53.3
CiPaw.05G259100 Carya illinoinensis HOM05D006803 ORTHO05D008552 4.5e-19 98.2 128 44.5
CDE04G2534 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 5.9e-19 97.8 107 46.7
Aqoxy7G00212 Aquilegia oxysepala HOM05D006803 ORTHO05D008552 7.7e-19 97.4 122 45.1
Cc02_g02040 Coffea canephora HOM05D006803 ORTHO05D008552 7.7e-19 97.4 52 75.0
TWI14G0759 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 7.7e-19 97.4 102 48.0
MD07G1283300 Malus domestica HOM05D006803 ORTHO05D008552 1.3e-18 96.7 66 66.7
Duzib205G0804 Durio zibethinus HOM05D006803 ORTHO05D008552 1.7e-18 96.3 121 47.1
EL10Ac3g05364 Beta vulgaris HOM05D006803 ORTHO05D008552 2.2e-18 95.9 104 51.0
CANSAT21G0672 Cannabis sativa HOM05D006803 ORTHO05D008552 2.2e-18 95.9 53 75.5
arahy.Tifrunner.gnm1.ann1.GHK1U8 Arachis hypogaea HOM05D006803 ORTHO05D008552 2.9e-18 95.5 111 48.6
arahy.Tifrunner.gnm1.ann1.V6YLC6 Arachis hypogaea HOM05D006803 ORTHO05D008552 2.9e-18 95.5 111 48.6
CDE03G0029 Ceratophyllum demersum HOM05D006803 ORTHO05D008552 3.8e-18 95.1 110 48.2
Eucgr.K00316 Eucalyptus grandis HOM05D006803 ORTHO05D008552 3.8e-18 95.1 72 63.9
Glyma.09G125800 Glycine max HOM05D006803 ORTHO05D008552 3.8e-18 95.1 69 68.1
TPR.G36689 Trifolium pratense HOM05D006803 ORTHO05D008552 5.0e-18 94.7 65 64.6
Lsat_1_v5_gn_9_57340 Lactuca sativa HOM05D006803 ORTHO05D008552 8.5e-18 94.0 72 51.4
PGR142G1334 Punica granatum HOM05D006803 ORTHO05D008552 1.1e-17 93.6 110 46.4
Sc19g0001080 Simmondsia chinensis HOM05D006803 ORTHO05D008552 1.9e-17 92.8 124 43.5
TWI39G0241 Tripterygium wilfordii HOM05D006803 ORTHO05D008552 1.9e-17 92.8 103 46.6
Ca_19336_v3 Cicer arietinum L. HOM05D006803 ORTHO05D008552 2.5e-17 92.4 129 46.5
VMungo0464G0281 Vigna mungo HOM05D006803 ORTHO05D008552 2.5e-17 92.4 65 69.2
Psat1g097000 Pisum sativum HOM05D006803 ORTHO05D008552 4.2e-17 91.7 130 45.4
Eucgr.L03342 Eucalyptus grandis HOM05D006803 ORTHO05D008552 5.5e-17 91.3 107 46.7
Glyma.16G172700 Glycine max HOM05D006803 ORTHO05D008552 5.5e-17 91.3 67 65.7
Lalb_Chr01g0009661 Lupinus albus HOM05D006803 ORTHO05D008552 9.4e-17 90.5 55 69.1
Phvul.004G101300 Phaseolus vulgaris HOM05D006803 ORTHO05D008552 2.1e-16 89.4 65 66.2
Lj2g0024519 Lotus japonicus HOM05D006803 ORTHO05D008552 2.7e-16 89.0 65 66.2
Rhsim03G0197200 Rhododendron simsii HOM05D006803 ORTHO05D008552 2.7e-16 89.0 53 71.7
Medtr6g034205 Medicago truncatula HOM05D006803 ORTHO05D008552 6.1e-16 87.8 65 63.1
Hund11694 Selenicereus undatus HOM05D006803 ORTHO05D008552 7.9e-16 87.4 110 49.1
CSS0034587 Camellia sinensis var. sinensis HOM05D006803 ORTHO05D008552 1.4e-15 86.7 51 62.7
DCAR_014527 Daucus carota HOM05D006803 ORTHO05D008552 1.4e-15 86.7 116 42.2
ATR0721G182 Amborella trichopoda HOM05D006803 ORTHO05D008552 3.0e-15 85.5 119 45.4
Mapoly0006s0111 Marchantia polymorpha HOM05D006803 ORTHO05D008552 3.0e-15 85.5 52 61.5
SEGI_13941 Sequoiadendron giganteum HOM05D006803 ORTHO05D008552 3.0e-15 85.5 52 63.5
Atru.chr1.293 Acer truncatum HOM05D006803 ORTHO05D008552 5.1e-15 84.7 62 58.1
SMO169G0228 Selaginella moellendorffii HOM05D006803 ORTHO05D008552 5.1e-15 84.7 82 50.0
Zm00001eb296320 Zea mays HOM05D006803 ORTHO05D008552 6.7e-15 84.3 59 61.0
Os05g0569200 Oryza sativa ssp. japonica HOM05D006803 ORTHO05D008552 8.8e-15 84.0 59 59.3
Sed0024434 Sechium edule HOM05D006803 ORTHO05D008552 2.0e-14 82.8 111 44.1
ECA232G4170 Erigeron canadensis HOM05D006803 ORTHO05D008552 9.7e-14 80.5 85 50.6
AagrBONN_evm.TU.Sc2ySwM_228.1351 Anthoceros agrestis HOM05D006803 ORTHO05D008552 6.9e-12 74.3 87 46.0
Pp3c4_26620 Physcomitrium patens HOM05D006803 ORTHO05D008552 3.2e-09 65.5 86 37.2
Pp3c26_8430 Physcomitrium patens HOM05D006803 ORTHO05D008552 1.2e-08 63.5 43 58.1
CBR_g9073 Chara braunii HOM05D006803 ORTHO05D008552 5.7e-06 54.7 54 44.4


User provided reference genes

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