Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Oeu007985.1 Olea europaea HOM05D000361 ORTHO05D008190 2.4e-57 225.3 118 100.0
RhsimUnG0105100 Rhododendron simsii HOM05D000361 ORTHO05D008190 3.1e-12 75.5 66 62.1
RhsimUnG0187700 Rhododendron simsii HOM05D000361 ORTHO05D008190 3.1e-12 75.5 66 62.1
Atru.chr6.1214 Acer truncatum HOM05D000361 ORTHO05D008190 5.3e-12 74.7 61 67.2
Medtr2g009190 Medicago truncatula HOM05D000361 ORTHO05D008190 1.2e-11 73.6 64 62.5
Sabra19G0028800 Salix brachista HOM05D000361 ORTHO05D008190 2.6e-11 72.4 70 55.7
Nitab4.5_0000863g0120 Nicotiana tabacum HOM05D000361 ORTHO05D008190 3.4e-11 72.0 53 71.7
THA.LOC104819509 Tarenaya hassleriana HOM05D000361 ORTHO05D008190 3.4e-11 72.0 61 65.6
CSS0016473 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008190 4.5e-11 71.6 61 63.9
FAN24G1062 Fragaria x ananassa HOM05D000361 ORTHO05D008190 4.5e-11 71.6 62 64.5
Lj9A350G62 Lonicera japonica HOM05D000361 ORTHO05D008190 4.5e-11 71.6 70 57.1
vmacro01841 Vaccinium macrocarpon HOM05D000361 ORTHO05D008190 4.5e-11 71.6 61 65.6
FAN27G0220 Fragaria x ananassa HOM05D000361 ORTHO05D008190 5.8e-11 71.2 62 62.9
CsaV3_7G006750 Cucumis sativus L. HOM05D000361 ORTHO05D008190 7.6e-11 70.9 63 61.9
Eucgr.I02633 Eucalyptus grandis HOM05D000361 ORTHO05D008190 9.9e-11 70.5 61 63.9
DCAR_021877 Daucus carota HOM05D000361 ORTHO05D008190 1.3e-10 70.1 61 63.9
PGSC0003DMG400012572 Solanum tuberosum HOM05D000361 ORTHO05D008190 1.7e-10 69.7 61 63.9
Peaxi162Scf01060g00132 Petunia axillaris HOM05D000361 ORTHO05D008190 2.2e-10 69.3 56 66.1
SHI20332 Sapria himalayana HOM05D000361 ORTHO05D008190 2.2e-10 69.3 53 67.9
Cc02_g21180 Coffea canephora HOM05D000361 ORTHO05D008190 2.9e-10 68.9 80 52.5
Actinidia24006 Actinidia chinensis HOM05D000361 ORTHO05D008190 3.8e-10 68.6 58 67.2
ClCG09G015670 Citrullus lanatus HOM05D000361 ORTHO05D008190 3.8e-10 68.6 58 65.5
GSVIVG01022626001 Vitis vinifera HOM05D000361 ORTHO05D008190 3.8e-10 68.6 62 61.3
Potri.019G014403 Populus trichocarpa HOM05D000361 ORTHO05D008190 4.9e-10 68.2 58 63.8
GSVIVG01022631001 Vitis vinifera HOM05D000361 ORTHO05D008190 4.9e-10 68.2 58 65.5
AT2G14050 Arabidopsis thaliana HOM05D000361 ORTHO05D008190 6.4e-10 67.8 61 62.3
Hma1.2p1_0784F.1_g217180 Hydrangea macrophylla HOM05D000361 ORTHO05D008190 8.4e-10 67.4 58 65.5
Oeu022079.1 Olea europaea HOM05D000361 ORTHO05D008190 8.4e-10 67.4 49 73.5
Aa31LG8G12490 Aethionema arabicum HOM05D000361 ORTHO05D008190 1.1e-09 67.0 61 62.3
Gohir.A12G016000 Gossypium hirsutum HOM05D000361 ORTHO05D008190 1.1e-09 67.0 58 67.2
Gohir.D12G016300 Gossypium hirsutum HOM05D000361 ORTHO05D008190 1.1e-09 67.0 58 67.2
Cpa.g.c31478.2 Carica papaya HOM05D000361 ORTHO05D008190 1.4e-09 66.6 61 62.3
CiPaw.05G032700 Carya illinoinensis HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 63.8
COL.COLO4_32315 Corchorus olitorius HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 65.5
Gorai.008G016500 Gossypium raimondii HOM05D000361 ORTHO05D008190 1.4e-09 66.6 50 74.0
Lj6g0015129 Lotus japonicus HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 65.5
Manes.10G104300 Manihot esculenta HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 63.8
Nn5g29999 Nelumbo nucifera HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 65.5
RcHm_v2.0_Chr6g0267231 Rosa chinensis HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 65.5
SGA_v2.0_scaffold83G26335 Striga asiatica HOM05D000361 ORTHO05D008190 1.4e-09 66.6 58 62.1
Ah.01g010080 Amaranthus hybridus HOM05D000361 ORTHO05D008190 1.9e-09 66.2 60 63.3
arahy.Tifrunner.gnm1.ann1.2R0HNS Arachis hypogaea HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 63.8
arahy.Tifrunner.gnm1.ann1.E9LA23 Arachis hypogaea HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 63.8
AUR62010162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
Ciclev10029860m.g Citrus clementina HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
Haze_10576 Corylus avellana HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 63.8
Migut.B00581 Erythranthe guttata HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 63.8
FvH4_2g10130 Fragaria vesca HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
FAN15G1148 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
FAN20G1792 Fragaria x ananassa HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
Lsat_1_v5_gn_9_116821 Lactuca sativa HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 63.8
MD05G1047800 Malus domestica HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 63.8
Nitab4.5_0003959g0080 Nicotiana tabacum HOM05D000361 ORTHO05D008190 1.9e-09 66.2 49 73.5
Prupe.8G065100 Prunus persica HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
Hund00081 Selenicereus undatus HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
Thecc.02G134000 Theobroma cacao HOM05D000361 ORTHO05D008190 1.9e-09 66.2 58 65.5
PSO675G7150 Papaver somniferum HOM05D000361 ORTHO05D008190 2.4e-09 65.9 50 70.0
Sed0008836 Sechium edule HOM05D000361 ORTHO05D008190 2.4e-09 65.9 58 62.1
GSVIVG01022621001 Vitis vinifera HOM05D000361 ORTHO05D008190 2.4e-09 65.9 58 63.8
CAN.G523.41 Capsicum annuum HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 63.8
Ca_00146_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 63.8
ECA240G4379 Erigeron canadensis HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 62.1
Thhalv10022581m.g Eutrema salsugineum HOM05D000361 ORTHO05D008190 3.2e-09 65.5 61 60.7
Glyma.15G055000 Glycine max HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 63.8
Phvul.006G204900 Phaseolus vulgaris HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 63.8
Psat1g215840 Pisum sativum HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 63.8
Sc08g0003720 Simmondsia chinensis HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 65.5
Sopen01g047990 Solanum pennellii HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 63.8
TAR376G0717 Trochodendron aralioides HOM05D000361 ORTHO05D008190 3.2e-09 65.5 58 62.1
AUR62013162 Chenopodium quinoa HOM05D000361 ORTHO05D008190 4.2e-09 65.1 58 63.8
PGR142G0624 Punica granatum HOM05D000361 ORTHO05D008190 4.2e-09 65.1 58 63.8
TPR.G25250 Trifolium pratense HOM05D005914 ORTHO05D008190 4.2e-09 65.1 58 62.1
SalBow5G3846 Salvia bowleyana HOM05D000361 ORTHO05D008190 5.5e-09 64.7 58 62.1
Lalb_Chr20g0122951 Lupinus albus HOM05D000361 ORTHO05D008190 7.1e-09 64.3 58 62.1
PSO541G0659 Papaver somniferum HOM05D000361 ORTHO05D008190 7.1e-09 64.3 58 62.1
PSO541G1218 Papaver somniferum HOM05D000361 ORTHO05D008190 7.1e-09 64.3 58 62.1
SEGI_16098 Sequoiadendron giganteum HOM05D000361 ORTHO05D008190 7.1e-09 64.3 58 60.3
EL10Ac9g21521 Beta vulgaris HOM05D000361 ORTHO05D008190 9.3e-09 63.9 58 62.1
HanXRQChr03g0067551 Helianthus annuus HOM05D000361 ORTHO05D008190 9.3e-09 63.9 58 62.1
Duzib052G0813 Durio zibethinus HOM05D003001 ORTHO05D008190 2.1e-08 62.8 58 62.1
MSTRG.20289 Avicennia marina HOM05D000361 ORTHO05D008190 2.7e-08 62.4 60 61.7
TWI14G0190 Tripterygium wilfordii HOM05D000361 ORTHO05D008190 4.6e-08 61.6 58 60.3
HPP92_004759 Vanilla planifolia HOM05D000361 ORTHO05D008190 4.6e-08 61.6 58 60.3
ATR0684G185 Amborella trichopoda HOM05D000361 ORTHO05D008190 6.0e-08 61.2 58 58.6
AL3G45720 Arabidopsis lyrata HOM05D000361 ORTHO05D008190 6.0e-08 61.2 58 60.3
BcaB08g34549 Brassica carinata HOM05D000361 ORTHO05D008190 6.0e-08 61.2 58 60.3
A03p45130 Brassica napus HOM05D000361 ORTHO05D008190 6.0e-08 61.2 58 60.3
BraA03t13648Z Brassica rapa HOM05D000361 ORTHO05D008190 6.0e-08 61.2 58 60.3
CARHR104240 Cardamine hirsuta HOM05D000361 ORTHO05D008190 6.0e-08 61.2 58 60.3
Aqoxy6G00715 Aquilegia oxysepala HOM05D000361 ORTHO05D008190 7.9e-08 60.8 58 58.6
Solyc01g105530.3 Solanum lycopersicum HOM05D000361 ORTHO05D008190 7.9e-08 60.8 46 71.7
Carub.0003s2831 Capsella rubella HOM05D000361 ORTHO05D008190 1.0e-07 60.5 58 60.3
Sp3g27310 Schrenkiella parvula HOM05D000361 ORTHO05D008190 1.3e-07 60.1 58 60.3
BcaC01g03107 Brassica carinata HOM05D000361 ORTHO05D008190 3.0e-07 58.9 58 58.6
C03p55990 Brassica napus HOM05D000361 ORTHO05D008190 3.0e-07 58.9 58 58.6
BolC3t17883H Brassica oleracea HOM05D000361 ORTHO05D008190 3.0e-07 58.9 58 58.6
Zm00001eb279300 Zea mays HOM05D000361 ORTHO05D008190 1.1e-06 57.0 58 56.9
Pp3c8_2220 Physcomitrium patens HOM05D000361 ORTHO05D008190 5.6e-06 54.7 58 51.7


User provided reference genes

Program Settings